Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0408600 | OGI:08073370 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:27431690-27432656 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGTTGTTCAGAATGGTTGGGCCTATGCAACAGGGTATGTTGTATAGCGTTGGATTAATATTGTTTAAATACTTAACTGTTTTATCAAATTTTCAAATGTTTGCTAAATGCTGCTTTTGCAAATGAAACCCTACTATGCCATCCTTTGTTATCCTGTGCACTTGCATATTTGCTGCGTGGCTTGCTGAGTATGTCATATACTCACCTTGCAATCATTCATCAGAGGAAGAGTTCTACAGTGAAGCTGATGGTGTGGAGGATTAGGTGTAGCCCTGGTCAAGCTGCCTGTGGAGTGGAGCCGTCTGCGCCGTTTATCTTATTTTCCGCTGCTTAGATCTTTATTGATTGAGAGGAACTATCTACCTCTGTAATGACATTTTATACGCTTAATAATTAGAGTAATAATTGTACTCTATTATCAATTTGTTATTGTGTGCCTCGGCTGATTCCTGGACGAGGGTTCACACACATGTAAGCGTTTGGAATTTTGGATAGAAATTCCGGGCGTGACATCCATGGTACGCAAAACACCACCCGAAATGCAGAGAATGTTCTCTGATCATGAACTACCTCATATGAATGAAATTCGTGCATTTCAATGGAGCGCAATCTTTCAGAAACACTTCTACATTTATGCTCTCCGCTTTCAAGTCTCTGACTCTGAATGTCCATGAAATCGCACTGCAGGTGAGAACGAAATTCACCATGTACAGGAGGATGGTGTACGTCCACATGGACGACGTCGCGAGCTGCCGCATCCTGCTCTACGAGACACCCCGTGCAGCCGGGAGGTACATCTGCAACTCTGCTGTCCTGAACATCAATGAGCTGCTCGTCACCTTGCTGTTCTTCTTCTTCTGTGATTCGTTGGTTGTATTTGTGTTACTGAAAATGGCATTCAGGCATTGCTCCGACTGTATATTTCTATGTAGTTTACTGTGCGTTTACGGGGTAACAGGTGTATGA
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| CDS seq | ATGGTTGTTCAGAATGGTTGGGCCTATGCAACAGGAAACACTTCTACATTTATGCTCTCCGCTTTCAAGTCTCTGACTCTGAATGTCCATGAAATCGCACTGCAGGTGAGAACGAAATTCACCATGTACAGGAGGATGGTGTACGTCCACATGGACGACGTCGCGAGCTGCCGCATCCTGCTCTACGAGACACCCCGTGCAGCCGGGAGGTACATCTGCAACTCTGCTGTCCTGAACATCAATGAGCTGCTCGTCACCTTGCTGTTCTTCTTCTTCTGTGATTCGTTGGTTGTATTTGTGTTACTGAAAATGGCATTCAGGCATTGCTCCGACTGTATATTTCTATGTAGTTTACTGTGCGTTTACGGGGTAACAGGTGTATGA |
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| Protein seq | MVVQNGWAYATGNTSTFMLSAFKSLTLNVHEIALQVRTKFTMYRRMVYVHMDDVASCRILLYETPRAAGRYICNSAVLNINELLVTLLFFFFCDSLVVFVLLKMAFRHCSDCIFLCSLLCVYGVTGV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0408600 | OsMH63_08T0408600.1 | Chr08 | 27431690 | 27432656 | + | maker | ||
| CDS seq | ATGGTTGTTCAGAATGGTTGGGCCTATGCAACAGGAAACACTTCTACATTTATGCTCTCCGCTTTCAAGTCTCTGACTCTGAATGTCCATGAAATCGCACTGCAGGTGAGAACGAAATTCACCATGTACAGGAGGATGGTGTACGTCCACATGGACGACGTCGCGAGCTGCCGCATCCTGCTCTACGAGACACCCCGTGCAGCCGGGAGGTACATCTGCAACTCTGCTGTCCTGAACATCAATGAGCTGCTCGTCACCTTGCTGTTCTTCTTCTTCTGTGATTCGTTGGTTGTATTTGTGTTACTGAAAATGGCATTCAGGCATTGCTCCGACTGTATATTTCTATGTAGTTTACTGTGCGTTTACGGGGTAACAGGTGTATGA
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| Protein seq | MVVQNGWAYATGNTSTFMLSAFKSLTLNVHEIALQVRTKFTMYRRMVYVHMDDVASCRILLYETPRAAGRYICNSAVLNINELLVTLLFFFFCDSLVVFVLLKMAFRHCSDCIFLCSLLCVYGVTGV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0515900 | SBH | 0.191819 | 0.000000 | 0.467281 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g40440 | SBH | 0.113458 | 0.000000 | 0.105210 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0515900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0022120 | SBH | 0.207707 | 4.251297 | 2.646562 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0022010 | SBH | 0.176460 | 0.304304 | 1.528219 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021930 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0320900 | SBH | 1.432266 | 3.7956585 | 1.9884985 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021810 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0429000 | SBH | 0.3367915 | 1.6807405 | 2.762724 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0021130 | SBH | 0.094008 | 0.111475 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0021440 | SBH | 0.232291 | 5.533621 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021260 | SBH | 0.668294 | 4.420412 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022090 | SBH | 0.324201 | 0.651900 | 0.308465 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021470 | SBH | 0.100226 | 21.369511 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021760 | SBH | 0.252465 | 13.254252 | 3.275339 |
