Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0072000 | OGI:08012210 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:4764384-4766558 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACTGGGGTTGGTCTGGATCCAGGTAGAGTTGCTCAAACTGGGCGGCCAATTCTTGGTTGTCCGCAGTGTATTGGGCATGTTGTCGAGCAAGCTCCCAGTCTTTAACGCTTAGTAGCATTTCGACGTGGTCGCTGCGCAGAGTCGTCCTCCGGTCTTCGATGATTCGGCCGCATAGACTGAAGGCCGATTCGGAGGACACCGTCGACACGGGCACCGTCAACACATCCCGTGCTAGTTTTGAAAGCACAGGATATGTTATCTTGTGGTCATTCCACCACCCGAGGACGTTGAAATCTTGTGCTTCGTGGTGGATGGCGTCGCTGTCCAAATAACCGGACAACTCTTCGGCCACAACATGCGAAGAGGCGTCTCCACTTGTAGCCGACGAACTGCCACCACCTTGGATTGAAGACGATCCACCCCAAATCCTACCCCACTGTATCTTCTTCTTACCTGTAGTGGGGATAGGAGGGGGTCTCTGCTGGCGAACTTCCTGAAACTTTACTTCATATCTTCCAAAAACCTCATATAATTTACGTCTAACCTCAGTATAAAAAGAACTATAATCTACACCTATAGTATCTCCAACAAGTGATAAAATAGCAGACAATCCCCTTAATTTACACCTAGGATCTAAAACAAAAGCAAAAGCATACAACATAGGTATATTTTTCCAATATTTCAAATATTTTTGTTTCATGTGAAAGACAGGTTCAGTTAGAACGTCATCATTTTCGTATTCTTTAAATAAAGTAGCAATTTCAAGAAGGTTGTGCAAAATTATATTAGCAGTTGGATAATAAACTTGTGACAAAGTTAGAGTACAATCATAAAAAGTTTCTAGAAATTGGTGAAATTTTTGGACAATTGCCCAAACATGCTCGTTTAGTACTGAAGACCCGTCACTGTTTCTTGGGCCACCACGTGACTGAACAAAATCAGAAAGTAAACTACTATAAGGTAAAACAACTTTTAACATTAAATACGTTGCATTCCACCGATGCTCTGCATCGGTGGCAAACTTACGAGCTTTCACACCGGCCGCATTGCAAAACCTCTTCCATGCAGCAATCCGCGGGTTAGAAGCAGTTAACCACGCGATTGCTTGACGAACAGCATCGATGTGGTCACCTACCCTCTTCATGCCAGTCTTAACAATCAAATTAATTATATGACATGCACAACGCTGATGGAGTAGAAAAGATTGAGCATACACACAAAATAAAGGTTGCAATATTTCAATAGCCCTAGAATTAGCAGATGCATTATCTAGGGTGACAGCAAATATTTTATCAGCAAGATTAAATTCATTAATTACTTCCCTAATTCTTTCAGCTATGTTTTCTCCTGTATGTGAGACATCTATTAACCTAAGCCCTAAAACTCTCTTTTGTAATTGCCAATCATCATCAACAAAATGAACAACTACGCTAAGATAATCCTCTCTAGCTCTACTACTCCATATATCTGAAGTAACACTAACAGAGAAAGTACATGTACTAAACAGTTCCTTAAGTGCAGTTGCTTCCTTGTGATAAACATTCTCTAAATCTCTAGTTGATGTTTGCCTACTCACAGCTTTAAACCTAGGGTTATGAGATTGCTGAATGTAATGTTCAAAAGCAGGGGACTCCCCAAAGTTCAGGGGTAAATCTTGCCTGGCGATTAACCGGACAAGAGATTCCCGAGCAACCATGGGATCGTACTCCCAACTGCGTACCGTACCGTCTGGGTTTAGCATAAGTTGCTGCTGCCGGAGTTGTATTCCTTGCTTCTTGGCACACGACTCCGCATGGCGCTTGAGGTGACCTGTACCACCAGAAGAACGAGCAGATAAAATTTGCCTACATATTCTACAACGGGCTTTCGATACCTCCCTTCCGTCGGGGCATGTTTCCTTTATCTCGTCGAAGTTTTGCCACACACCGGAGGTTCTCGATCTCTTCGAGCCGGTGTGTGTCGAAACACTTTCGCTCGCGGTTCCGGAAAATCCTTCCGAAGCTGTCGCCGCCTGAACCGGTACCTCCTCAACGACAGCCGTATGAACCGGTACCTCCTCCACAGATGGTGGAGTTGGAGCCGATCCGGAGGTATCGTCAAACCCCGACATGTAGTTGGGGTCGAAATCACCCAAGGTGAACGACGGCGACTGGTATGGAAAGTTCGGATCCAT
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| CDS seq | ATGGATCCGAACTTTCCATACCAGTCGCCGTCGTTCACCTTGGGTGATTTCGACCCCAACTACATGTCGGGGTTTGACGATACCTCCGGATCGGCTCCAACTCCACCATCTGTGGAGGAGGTACCGGTTCATACGGCTGTCGTTGAGGAGGTACCGGTTCAGGCGGCGACAGCTTCGGAAGGATTTTCCGGAACCGCGAGCGAAAGTGTTTCGACACACACCGGCTCGAAGAGATCGAGAACCTCCGGTGTGTGGCAAAACTTCGACGAGATAAAGGAAACATGCCCCGACGGAAGGGAGGTATCGAAAGCCCGTTGTAGAATATGTAGGCAAATTTTATCTGCTCGTTCTTCTGGTGGTACAGGTCACCTCAAGCGCCATGCGGAGTCGTGTGCCAAGAAGCAAGGAATACAACTCCGGCAGCAGCAACTTATGCTAAACCCAGACGGTACGGTACGCAGTTGGGAGTACGATCCCATGGTTGCTCGGGAATCTCTTGTCCGGTTAATCGCCAGGCAAGATTTACCCCTGAACTTTGGGGAGTCCCCTGCTTTTGAACATTACATTCAGCAATCTCATAACCCTAGGTTTAAAGCTGTGAGTAGGCAAACATCAACTAGAGATTTAGAGAATGTTTATCACAAGGAAGCAACTGCACTTAAGGAACTGTTTAGTACATGTACTTTCTCTGTTAGTGTTACTTCAGATATATGGAGTAGTAGAGCTAGAGAGGATTATCTTAGCGTAGTTGTTCATTTTGTTGATGATGATTGGCAATTACAAAAGAGAGTTTTAGGGCTTAGGTTAATAGATGTCTCACATACAGGAGAAAACATAGCTGAAAGAATTAGGGAAGTAATTAATGAATTTAATCTTGCTGATAAAATATTTGCTGTCACCCTAGATAATGCATCTGCTAATTCTAGGGCTATTGAAATATTGCAACCTTTATTTTGTGTGTATGCTCAATCTTTTCTACTCCATCAGCGTTGTGCATGTCATATAATTAATTTGATTGTTAAGACTGGCATGAAGAGGGTAGGTGACCACATCGATGCTGTTCGTCAAGCAATCGCGTGGTTAACTGCTTCTAACCCGCGGATTGCTGCATGGAAGAGGTTTTGCAATGCGGCCGGTGTGAAAGCTCATCCTAGGTGTAAATTAAGGGGATTGTCTGCTATTTTATCACTTGTTGGAGATACTATAGGTGTAGATTATAGTTCTTTTTATACTGAGGTTAGACGTAAATTATATGAGGTTTTTGGAAGATATGAAGTAAAGTTTCAGGAAGTTCGCCAGCAGAGACCCCCTCCTATCCCCACTACAGGTAAGAAGAAGATACAGTGGGGTAGGATTTGGGGTGGATCGTCTTCAATCCAAGGTGGTGGCAGTTCGTCGGCTACAAGTGGAGACGCCTCTTCGCATGTTGTGGCCGAAGAGTTGTCCGGTTATTTGGACAGCGACGCCATCCACCACGAAGCACAAGATTTCAACGTCCTCGGGTGGTGGAATGACCACAAGATAACATATCCTGTGCTTTCAAAACTAGCACGGGATGTGTTGACGGTGCCCGTGTCGACGGTGTCCTCCGAATCGGCCTTCAGTCTATGCGGCCGAATCATCGAAGACCGGAGGACGACTCTGCGCAGCGACCACGTCGAAATGCTACTAAGCGTTAAAGACTGGGAGCTTGCTCGACAACATGCCCAATACACTGCGGACAACCAAGAATTGGCCGCCCAGTTTGAGCAACTCTACCTGGATCCAGACCAACCCCAGTAG
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| Protein seq | MDPNFPYQSPSFTLGDFDPNYMSGFDDTSGSAPTPPSVEEVPVHTAVVEEVPVQAATASEGFSGTASESVSTHTGSKRSRTSGVWQNFDEIKETCPDGREVSKARCRICRQILSARSSGGTGHLKRHAESCAKKQGIQLRQQQLMLNPDGTVRSWEYDPMVARESLVRLIARQDLPLNFGESPAFEHYIQQSHNPRFKAVSRQTSTRDLENVYHKEATALKELFSTCTFSVSVTSDIWSSRAREDYLSVVVHFVDDDWQLQKRVLGLRLIDVSHTGENIAERIREVINEFNLADKIFAVTLDNASANSRAIEILQPLFCVYAQSFLLHQRCACHIINLIVKTGMKRVGDHIDAVRQAIAWLTASNPRIAAWKRFCNAAGVKAHPRCKLRGLSAILSLVGDTIGVDYSSFYTEVRRKLYEVFGRYEVKFQEVRQQRPPPIPTTGKKKIQWGRIWGGSSSIQGGGSSSATSGDASSHVVAEELSGYLDSDAIHHEAQDFNVLGWWNDHKITYPVLSKLARDVLTVPVSTVSSESAFSLCGRIIEDRRTTLRSDHVEMLLSVKDWELARQHAQYTADNQELAAQFEQLYLDPDQPQ |
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| Function | Putative AC transposase [UniProtKB/Swiss-Prot:P08770] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0072000 | OsMH63_08T0072000.1 | Chr08 | 4764384 | 4766558 | - | maker | ||
| CDS seq | ATGGATCCGAACTTTCCATACCAGTCGCCGTCGTTCACCTTGGGTGATTTCGACCCCAACTACATGTCGGGGTTTGACGATACCTCCGGATCGGCTCCAACTCCACCATCTGTGGAGGAGGTACCGGTTCATACGGCTGTCGTTGAGGAGGTACCGGTTCAGGCGGCGACAGCTTCGGAAGGATTTTCCGGAACCGCGAGCGAAAGTGTTTCGACACACACCGGCTCGAAGAGATCGAGAACCTCCGGTGTGTGGCAAAACTTCGACGAGATAAAGGAAACATGCCCCGACGGAAGGGAGGTATCGAAAGCCCGTTGTAGAATATGTAGGCAAATTTTATCTGCTCGTTCTTCTGGTGGTACAGGTCACCTCAAGCGCCATGCGGAGTCGTGTGCCAAGAAGCAAGGAATACAACTCCGGCAGCAGCAACTTATGCTAAACCCAGACGGTACGGTACGCAGTTGGGAGTACGATCCCATGGTTGCTCGGGAATCTCTTGTCCGGTTAATCGCCAGGCAAGATTTACCCCTGAACTTTGGGGAGTCCCCTGCTTTTGAACATTACATTCAGCAATCTCATAACCCTAGGTTTAAAGCTGTGAGTAGGCAAACATCAACTAGAGATTTAGAGAATGTTTATCACAAGGAAGCAACTGCACTTAAGGAACTGTTTAGTACATGTACTTTCTCTGTTAGTGTTACTTCAGATATATGGAGTAGTAGAGCTAGAGAGGATTATCTTAGCGTAGTTGTTCATTTTGTTGATGATGATTGGCAATTACAAAAGAGAGTTTTAGGGCTTAGGTTAATAGATGTCTCACATACAGGAGAAAACATAGCTGAAAGAATTAGGGAAGTAATTAATGAATTTAATCTTGCTGATAAAATATTTGCTGTCACCCTAGATAATGCATCTGCTAATTCTAGGGCTATTGAAATATTGCAACCTTTATTTTGTGTGTATGCTCAATCTTTTCTACTCCATCAGCGTTGTGCATGTCATATAATTAATTTGATTGTTAAGACTGGCATGAAGAGGGTAGGTGACCACATCGATGCTGTTCGTCAAGCAATCGCGTGGTTAACTGCTTCTAACCCGCGGATTGCTGCATGGAAGAGGTTTTGCAATGCGGCCGGTGTGAAAGCTCATCCTAGGTGTAAATTAAGGGGATTGTCTGCTATTTTATCACTTGTTGGAGATACTATAGGTGTAGATTATAGTTCTTTTTATACTGAGGTTAGACGTAAATTATATGAGGTTTTTGGAAGATATGAAGTAAAGTTTCAGGAAGTTCGCCAGCAGAGACCCCCTCCTATCCCCACTACAGGTAAGAAGAAGATACAGTGGGGTAGGATTTGGGGTGGATCGTCTTCAATCCAAGGTGGTGGCAGTTCGTCGGCTACAAGTGGAGACGCCTCTTCGCATGTTGTGGCCGAAGAGTTGTCCGGTTATTTGGACAGCGACGCCATCCACCACGAAGCACAAGATTTCAACGTCCTCGGGTGGTGGAATGACCACAAGATAACATATCCTGTGCTTTCAAAACTAGCACGGGATGTGTTGACGGTGCCCGTGTCGACGGTGTCCTCCGAATCGGCCTTCAGTCTATGCGGCCGAATCATCGAAGACCGGAGGACGACTCTGCGCAGCGACCACGTCGAAATGCTACTAAGCGTTAAAGACTGGGAGCTTGCTCGACAACATGCCCAATACACTGCGGACAACCAAGAATTGGCCGCCCAGTTTGAGCAACTCTACCTGGATCCAGACCAACCCCAGTAG
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| Protein seq | MDPNFPYQSPSFTLGDFDPNYMSGFDDTSGSAPTPPSVEEVPVHTAVVEEVPVQAATASEGFSGTASESVSTHTGSKRSRTSGVWQNFDEIKETCPDGREVSKARCRICRQILSARSSGGTGHLKRHAESCAKKQGIQLRQQQLMLNPDGTVRSWEYDPMVARESLVRLIARQDLPLNFGESPAFEHYIQQSHNPRFKAVSRQTSTRDLENVYHKEATALKELFSTCTFSVSVTSDIWSSRAREDYLSVVVHFVDDDWQLQKRVLGLRLIDVSHTGENIAERIREVINEFNLADKIFAVTLDNASANSRAIEILQPLFCVYAQSFLLHQRCACHIINLIVKTGMKRVGDHIDAVRQAIAWLTASNPRIAAWKRFCNAAGVKAHPRCKLRGLSAILSLVGDTIGVDYSSFYTEVRRKLYEVFGRYEVKFQEVRQQRPPPIPTTGKKKIQWGRIWGGSSSIQGGGSSSATSGDASSHVVAEELSGYLDSDAIHHEAQDFNVLGWWNDHKITYPVLSKLARDVLTVPVSTVSSESAFSLCGRIIEDRRTTLRSDHVEMLLSVKDWELARQHAQYTADNQELAAQFEQLYLDPDQPQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0076655 | 0.0505245 | 0.2107375 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0180500 | SBH | 0.775059 | 0.744474 | 2.439815 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g10780 | SBH | 0.142946 | 0.485322 | 0.110681 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0180500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0006360 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0006440 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0006340 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0006220 | SBH | 0.0 | 1.685259 | 0.550031 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0074400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0006080 | SBH | 0.0 | 0.092984 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0034600 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0006050 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0006100 | SBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0006030 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0006230 | SBH | 0.0 | 0.768632 | 0.295667 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0006070 | SBH | 0.0 | 2.270802 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G006070 | SBH | 0.122131 | 1.589484 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005960 | SBH | 0.275209 | 12.317497 | 0.911065 |
