Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0043000 | OGI:08007410 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:2848998-2851761 | ||||||||
| Gene Symbol | OsSTA205 | ||||||||||
| DNA seq | AATGGAACCTTAACGGTGAAGTGGACTTGTAAACTTGAAAAGCGAGGTCAAATTGGTAGCTAAGACTTCACAATAGGGTCAAATGGGCAATTGTCTCTATTAATAATTCTATATGGTTGTCCTGCTGTTCAACATACGCATATTTACCTATTCTCATCTTAAACGAGTAGGGTATGCTTTATAGATTTCTTCACCAAATTTAAGGTAAAGGTAGATACAGTTCTGTCGATTTGGTTCAATGCAGTCACTGTATATGCATATAGTTGCTTCGTGTTCCTCACTGATATTCTTGCTCCTGTTGCCTACTTAATGTTTACATTGTATCCGGTTGGCTACTAAATGATTACATTGTATACCTAAACCAATCGAATTTGTAGCCCATAATGCACCTTTGTAGATTTCTGCTTGCTTCTGGCCACAACAGACTCTTATAGCATTTCTAATGGAATCTGGCAGTTGCAATCTTTGTTTCTACATGATCTGCTTTCCATGCATCCAACATAAGTAGGCTCATGCAGCGAATGCCATCCTACGAACCTCCAGGTTAGTGCCGTATTCTGTTGTGCACTATGTACAAGATGTAACTTTGCTGTGGTGGTTGAATTACTCCAGTTCCCCGATGATGATGTTAGTGATCAGGTTAACCCAGAGCAGTCGATGGTGACTTACTGACTTCCCTGTTGGTTGTCACTACTGCAGTACTCTTTTACTACATTTCATGCATGCAGCACTAACAATATTGTTTACATGAAACTTTTAGATTAGTTTTTTTCCCTCATCAATAACACATGTTATATACTAATACTTATATTCCTTTCTTGGTGGTTCATTTTGTACTAATTTATCCTTCCAATTATATTCCATAGACACACCACAACCATTTGCAATTCAGCTAATTTGCTTCCCACCTCCCTGTATAGGAGTATGCATATCAATTTGCAGGTATTAACTTTTTGCCGCTTGTGAAATCCAGTTTAAAAGGTTGAGATTTATTCCACATGCTTTGTACTCTGGAATGATTTATTTTATTTATGAACAAATTATCCTGATCCCTGCAGCTCCATGGAAGATAAAACATAGGAAATCTGAGAAGAACATATTGTATATTCATATCCTCTTCTAGCATGTATGATGATCATTTTTTTTCTAGCTTGCTAACTGTGTTGAATAGTATAGGGATGCCTCGGGGGCCAGTATACATAGGTTACATGGATTGGATCTTAAGTAAACTCAGAGAGATAGAGATGGAAACTAATCCTATCCTACCATAGCAAACCGGATACAATACGATCCTATCCATATACTCTAACAAACTGACATCTACAACTTCTACAAAAACACAATGTAATACAAGTTGCATGTGTACGATTCCAAATCCCAACTAGGCTAGCCTCAGGTTTGCTTTGTGTTGTTATAATTAAAATTCTAATGCCACTATGTTCTGAACCAATCTTGCAATTGTTCCATTCCAGATTTAATTGAAGAATATGGTGACAATTGGAAAGGATTTGTGAGGGTGAGTTGGGTCGTTTAAAGTACCTTCTGACATGATCAACTATAGCAATTTAAGATTTATAAAAAGGGAGCAATTTACAGAAGTGAGTTATATACCATGAGTGTTGGGTCATGCAGTTCACCCTCAAAGTCACAAACAAGAGAAGCAGCTGTCAGGATCTTGGCACACTTGTTGACCCCATCCAAACCAACAACAATGCCAGTGCATTGAGAAACCAGTTCCCCATCTGCGCAAGTCATCCAATGGCATTTATCAATAGCTACGAGGAAGCGTGCATATAAATAGTATAAAGCTTAGATAATTTTACCAGGCTTTTTAGATTTAACACCAACAACGGAGCAAGCCACTCGCCCCACCATAGCTTTGTCTTCTGAGCTAACCACGGCATCAGCAGTACGGGGATCCTTAGGCTCACCCCTGAGAGTCGGGATATCCTTACGATGTGCTAACGAGGGGAAAAAAAGGAAGATCAGTGACCACCATTGATCAATCAGGGTTTGTGAATTAAGGAAGAACAGTGACCATCATTATCAAGCAAAGCAGCGGTGTGAAGTACTATAAAACAAAAGGTAGAAAGAAAGAAAGAAAGAAAAAGAAAGGATTGGGCGAGTGAGAACCTTGTTTTTCGAGCTTGCTGATCCTGCTGCACTCTGTCATCCAGTTTCCAACAGCACACATGTATTTATTGCTAAGAGTATGTTGGCCAGGCTGTAAGCTTGGGTAATCCGGGTAGCGAAGAGGAACCGGCCGGGAGGCCAAGCTTGTACCGGCGGCGGCGGTCGTTCCCCTCTCTTTTGTTCTGCTGGCCTTCTGAGGTGTGGTCTTTCTCGACTTCTTCAAAACCGAACCTGACGACGGAGACACAACCACTATCCTCTTGCTCTTCCTCGGAGTCGAGCACGCCGGCACTTCAGGCTCTGCCGTGCCCCTGCCCCCGCCCCAGCCGCCGCCGCGTCCTCCTCCTTGGCCGCCACCGACCCCGCCTCCTCCACCGCCGCCTTGAACGCCATCGCCGCCAGCACAGTCAGACACTGTACTATCCAACCGCATGATCATCCTTCTAGTTCTAGATCGAGTCCATGTTCCGCTCGCCACCGGAGATTCTCCGGTGGCCGCATCCGTCGACGAACAGATCTTTCTGCGTGGCGCCGACCTCGGTTTTTTGGGTGGCATCGCCGCCTCTCGTGGCTAGAGCTGCGGCGGAGATGTGGTTGCTAGGGTTTGCTTTTCCATTTTTAGATTACAAAG
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| CDS seq | ATGCCACCCAAAAAACCGAGGTCGGCGCCACGCAGAAAGATCTGTTCGTCGACGGATGCGGCCACCGGAGAATCTCCGGTGGCGAGCGGAACATGGACTCGATCTAGAACTAGAAGGATGATCATGCGGTTGGATAGTACAGTGTCTGACTGTGCTGGCGGCGATGGCGTTCAAGGCGGCGGTGGAGGAGGCGGGGTCGGTGGCGGCCAAGGAGGAGGACGCGGCGGCGGCTGGGGCGGGGGCAGGGGCACGGCAGAGCCTGAAGTGCCGGCGTGCTCGACTCCGAGGAAGAGCAAGAGGATAGTGGTTGTGTCTCCGTCGTCAGGTTCGGTTTTGAAGAAGTCGAGAAAGACCACACCTCAGAAGGCCAGCAGAACAAAAGAGAGGGGAACGACCGCCGCCGCCGGTACAAGCTTGGCCTCCCGGCCGGTTCCTCTTCGCTACCCGGATTACCCAAGCTTACAGCCTGGCCAACATACTCTTAGCAATAAATACATGTGTGCTGTTGGAAACTGGATGACAGAGTGCAGCAGGATCAGCAAGCTCGAAAAACAAGCACATCGTAAGGATATCCCGACTCTCAGGGGTGAGCCTAAGGATCCCCGTACTGCTGATGCCGTGGTTAGCTCAGAAGACAAAGCTATGGTGGGGCGAGTGGCTTGCTCCGTTGTTGGTGTTAAATCTAAAAAGCCTGATGGGGAACTGGTTTCTCAATGCACTGGCATTGTTGTTGGTTTGGATGGGGTCAACAAGTGTGCCAAGATCCTGACAGCTGCTTCTCTTGTTTGTGACTTTGAGGGTGAACTGCATGACCCAACACTCATGGTATATAACTCACTTCTGTAA
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| Protein seq | MPPKKPRSAPRRKICSSTDAATGESPVASGTWTRSRTRRMIMRLDSTVSDCAGGDGVQGGGGGGGVGGGQGGGRGGGWGGGRGTAEPEVPACSTPRKSKRIVVVSPSSGSVLKKSRKTTPQKASRTKERGTTAAAGTSLASRPVPLRYPDYPSLQPGQHTLSNKYMCAVGNWMTECSRISKLEKQAHRKDIPTLRGEPKDPRTADAVVSSEDKAMVGRVACSVVGVKSKKPDGELVSQCTGIVVGLDGVNKCAKILTAASLVCDFEGELHDPTLMVYNSLL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0043000 | OsMH63_08T0043000-mRNA-1 | Chr08 | 2848998 | 2851761 | - | maker | ||
| CDS seq | ATGCCACCCAAAAAACCGAGGTCGGCGCCACGCAGAAAGATCTGTTCGTCGACGGATGCGGCCACCGGAGAATCTCCGGTGGCGAGCGGAACATGGACTCGATCTAGAACTAGAAGGATGATCATGCGGTTGGATAGTACAGTGTCTGACTGTGCTGGCGGCGATGGCGTTCAAGGCGGCGGTGGAGGAGGCGGGGTCGGTGGCGGCCAAGGAGGAGGACGCGGCGGCGGCTGGGGCGGGGGCAGGGGCACGGCAGAGCCTGAAGTGCCGGCGTGCTCGACTCCGAGGAAGAGCAAGAGGATAGTGGTTGTGTCTCCGTCGTCAGGTTCGGTTTTGAAGAAGTCGAGAAAGACCACACCTCAGAAGGCCAGCAGAACAAAAGAGAGGGGAACGACCGCCGCCGCCGGTACAAGCTTGGCCTCCCGGCCGGTTCCTCTTCGCTACCCGGATTACCCAAGCTTACAGCCTGGCCAACATACTCTTAGCAATAAATACATGTGTGCTGTTGGAAACTGGATGACAGAGTGCAGCAGGATCAGCAAGCTCGAAAAACAAGCACATCGTAAGGATATCCCGACTCTCAGGGGTGAGCCTAAGGATCCCCGTACTGCTGATGCCGTGGTTAGCTCAGAAGACAAAGCTATGGTGGGGCGAGTGGCTTGCTCCGTTGTTGGTGTTAAATCTAAAAAGCCTGATGGGGAACTGGTTTCTCAATGCACTGGCATTGTTGTTGGTTTGGATGGGGTCAACAAGTGTGCCAAGATCCTGACAGCTGCTTCTCTTGTTTGTGACTTTGAGGGTGAACTGCATGACCCAACACTCATGGTATATAACTCACTTCTGTAA
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| Protein seq | MPPKKPRSAPRRKICSSTDAATGESPVASGTWTRSRTRRMIMRLDSTVSDCAGGDGVQGGGGGGGVGGGQGGGRGGGWGGGRGTAEPEVPACSTPRKSKRIVVVSPSSGSVLKKSRKTTPQKASRTKERGTTAAAGTSLASRPVPLRYPDYPSLQPGQHTLSNKYMCAVGNWMTECSRISKLEKQAHRKDIPTLRGEPKDPRTADAVVSSEDKAMVGRVACSVVGVKSKKPDGELVSQCTGIVVGLDGVNKCAKILTAASLVCDFEGELHDPTLMVYNSLL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.5808275 | 4.2198315 | 9.3217855 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0149000 | SBH | 0.0 | 0.0 | 0.286084 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g04920 | SBH | 2.923445 | 3.783135 | 1.747743 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0149000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0003250 | RBH | 0.408078 | 0.0 | 8.280256 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0003330 | SBH | 0.000000 | 0.000000 | 1.111179 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0003260 | RBH | 0.619806 | 3.172952 | 13.532435 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0003250 | RBH | 0.158440 | 0.283345 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0003070 | RBH | 15.959899 | 11.041321 | 19.353519 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0002940 | RBH | 0.287227 | 0.187231 | 2.749845 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0048100 | RBH | 4.6886835 | 3.954955 | 5.430094 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0002960 | RBH | 0.485622 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0003000 | RBH | 0.705983 | 7.173265 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0002810 | SBH | 2.399702 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0003090 | RBH | 0.968479 | 0.590885 | 2.123413 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0003010 | RBH | 0.088754 | 0.696470 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G002940 | RBH | 0.000000 | 0.0 | 0.351783 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0002810 | RBH | 0.000000 | 0.0 | 6.337315 |
