Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0474700 | OGI:07079470 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:30330104-30332183 | ||||||||
| Gene Symbol | RLCK241, OsRLCK241, PTK11, OsPTK11 | ||||||||||
| DNA seq | GACAGCTTGATCAGTCATCTCTATCCCTTGAATTCTCTGGCTTCCTGTCCATATATTCTTCCATGCCTCCCATCACAACCTAAGACCATACTCCATTTTGGAGTTCGCAGCAACTGCTCATCTGGGATTGCAGTTGCAGGTGATCAAGGATTAAGAGGTTCATCCAAAATGGGGAACTGCATGGGCTCATCCAAGTGCGCCAGTGCATCGGCTCCACTTGAATCAAGTAAGATGCTACTCTGATATATACATCATATTTCTGTTCGTGGTTTGATTAGCCAAGAAACATGATGAGGAAGAAGCAATCAAATAGACAATTAGCAGTATCCATGCTGATCTATGTAATATGGTTTGAAAATTATTCAGAGGTTACGAGAAGCAGCAACTCGACGACGACGACGGACAACACCTCCAAGGCATCGCAGCGCAGCTCGTCGGCGTTCTCGTCGGGGCAGTTCTCGCGAGCCAGCTCCGACGAGTCGTCGGCGGCGCCGTCGCTGTCGTCCCTCAAGTCGTTCAACATGGGCGACCTCCGCGCGGCGACCAAGAACTTCGGTTCCAACTCGTTCCTGGGAGAGGGCGGGTTCGGGTGCGTGTACAAGGGTTGGATCGACGAGCTCACCCTCGCCCCTACCAAGCCCGGCGTCGGCAAGATGGTCGCCATCAAGAAGCTCAAGAAGGAGAGCTTCCAGGGTCACAAGGAGTGGCTGGTAATTAATTAATTAACTAACTACACTTGCTAATCATTTCAACTTTTCATTGATTAATTAACCTTCGATCACTTGCAGGCAGAGGTGACCTACTTGGGGCAGCTCCACCATGAGAACCTGGTGAAGCTGGTGGGCTACTGCTCGGATTCCGACAGCAACAAGCTGCTCGTCTACGAGTACATGCTCAGAGGCAGCCTCGAGAACCACCTCTTCAGAAGTGAGTAGTATATAGTACACTGTACACTGATCAAATCGAATCGATTCTTCAATTCAGAAGTGAATGTAATGGATGTTGCATACTGTATGATGCATGCAGGAGGGACGCAGCCGCTGTCGTGGGCGATGCGGGTGAACATCGCGGTGGACGTGGCGAGGGGGCTGTCCTTCTTGCACGGGCTGGAGAACCCCATCATCTTCCGGGACCTCAAGTCGTCCAACGTCCTCCTCGCCGGCGACTACCGGGCCAAGCTGTCGGACTTCGGGCTGGCGCGGAACGGGCCCACCGGCGACAAGAGCCACGTGTCCACCCGCGTCGTCGGCACCAGGGGCTACGCCGCGCCGGAGTACGTCGCCACGGGCCACCTCTCCGTCAAGAGCGACGTCTACAGCTTCGGCGTCGTGCTGCTCGAGCTCCTCACGGGGCGCCGCGCGCTCGACGCCGCCCGCGGCGCCACCGCCGAGATGCTCGTCGACTGGGCGAGGCCCCACCTCGGCGATCGCCGGAAGGTCAACCGCATCATGGACACCAGGCTCGGCGGCCAGTATCCCAAGAAGCAGGCGCAGGACATGGCGGCGCTCGCGCTCCGCTGCCTCCACCACGACCCCAAGCTCCGCCCCGCCATGCCCGACGACGTGCTGCCGCAGCTGCGCCTGCTGCAGCAGAACACCAAGCCATCCTCCTCGTCGACCTCGGCGCCGGCGCACAGGTCGAGGCCATTCCAAGCGCTAGCGAGCTAGCTAGCTAGGCGTCTTGTTAATTAATTACTTCGTCATCTCTCAATTACTCCAGTATTATTTGTTTGTTAATTTCATGCTAGCATAGTAGCATGTGGTGTCTATACAGACAAAAGAATCGATGAACATCTAGCTACCTAGTTTGTAATTAGTTAGGTAGGAGATATATATCATTGCTGTGTGAAAATTGTGAATTATATATTGCTAGCTGCAAATTAAGTAGATAATATTATTATAGCTAGGTTCAGAAATTCCATGCATTTGTGTGCATCATCAGTATAGAGACGATTGAGGATTTGTGATTTGTTTTGACACTATGTTCTTGCTTTCATTTCCTTTTACCATCAAATGAAGGCTTTGTTTGCTCATGCCAATCTGTTGAACTTCAATTGATTAATTACGGACGCTGTTAGAGT
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| CDS seq | ATGGGGAACTGCATGGGCTCATCCAAGTGCGCCAGTGCATCGGCTCCACTTGAATCAAAGGTTACGAGAAGCAGCAACTCGACGACGACGACGGACAACACCTCCAAGGCATCGCAGCGCAGCTCGTCGGCGTTCTCGTCGGGGCAGTTCTCGCGAGCCAGCTCCGACGAGTCGTCGGCGGCGCCGTCGCTGTCGTCCCTCAAGTCGTTCAACATGGGCGACCTCCGCGCGGCGACCAAGAACTTCGGTTCCAACTCGTTCCTGGGAGAGGGCGGGTTCGGGTGCGTGTACAAGGGTTGGATCGACGAGCTCACCCTCGCCCCTACCAAGCCCGGCGTCGGCAAGATGGTCGCCATCAAGAAGCTCAAGAAGGAGAGCTTCCAGGGTCACAAGGAGTGGCTGGCAGAGGTGACCTACTTGGGGCAGCTCCACCATGAGAACCTGGTGAAGCTGGTGGGCTACTGCTCGGATTCCGACAGCAACAAGCTGCTCGTCTACGAGTACATGCTCAGAGGCAGCCTCGAGAACCACCTCTTCAGAAGAGGGACGCAGCCGCTGTCGTGGGCGATGCGGGTGAACATCGCGGTGGACGTGGCGAGGGGGCTGTCCTTCTTGCACGGGCTGGAGAACCCCATCATCTTCCGGGACCTCAAGTCGTCCAACGTCCTCCTCGCCGGCGACTACCGGGCCAAGCTGTCGGACTTCGGGCTGGCGCGGAACGGGCCCACCGGCGACAAGAGCCACGTGTCCACCCGCGTCGTCGGCACCAGGGGCTACGCCGCGCCGGAGTACGTCGCCACGGGCCACCTCTCCGTCAAGAGCGACGTCTACAGCTTCGGCGTCGTGCTGCTCGAGCTCCTCACGGGGCGCCGCGCGCTCGACGCCGCCCGCGGCGCCACCGCCGAGATGCTCGTCGACTGGGCGAGGCCCCACCTCGGCGATCGCCGGAAGGTCAACCGCATCATGGACACCAGGCTCGGCGGCCAGTATCCCAAGAAGCAGGCGCAGGACATGGCGGCGCTCGCGCTCCGCTGCCTCCACCACGACCCCAAGCTCCGCCCCGCCATGCCCGACGACGTGCTGCCGCAGCTGCGCCTGCTGCAGCAGAACACCAAGCCATCCTCCTCGTCGACCTCGGCGCCGGCGCACAGGTCGAGGCCATTCCAAGCGCTAGCGAGCTAG
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| Protein seq | MGNCMGSSKCASASAPLESKVTRSSNSTTTTDNTSKASQRSSSAFSSGQFSRASSDESSAAPSLSSLKSFNMGDLRAATKNFGSNSFLGEGGFGCVYKGWIDELTLAPTKPGVGKMVAIKKLKKESFQGHKEWLAEVTYLGQLHHENLVKLVGYCSDSDSNKLLVYEYMLRGSLENHLFRRGTQPLSWAMRVNIAVDVARGLSFLHGLENPIIFRDLKSSNVLLAGDYRAKLSDFGLARNGPTGDKSHVSTRVVGTRGYAAPEYVATGHLSVKSDVYSFGVVLLELLTGRRALDAARGATAEMLVDWARPHLGDRRKVNRIMDTRLGGQYPKKQAQDMAALALRCLHHDPKLRPAMPDDVLPQLRLLQQNTKPSSSSTSAPAHRSRPFQALAS |
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| Function | Probable serine/threonine-protein kinase PBL18 [UniProtKB/Swiss-Prot:Q5XF79] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0474700 | OsMH63_07T0474700.1 | Chr07 | 30330104 | 30332183 | + | maker | ||
| CDS seq | ATGGGGAACTGCATGGGCTCATCCAAGTGCGCCAGTGCATCGGCTCCACTTGAATCAAAGGTTACGAGAAGCAGCAACTCGACGACGACGACGGACAACACCTCCAAGGCATCGCAGCGCAGCTCGTCGGCGTTCTCGTCGGGGCAGTTCTCGCGAGCCAGCTCCGACGAGTCGTCGGCGGCGCCGTCGCTGTCGTCCCTCAAGTCGTTCAACATGGGCGACCTCCGCGCGGCGACCAAGAACTTCGGTTCCAACTCGTTCCTGGGAGAGGGCGGGTTCGGGTGCGTGTACAAGGGTTGGATCGACGAGCTCACCCTCGCCCCTACCAAGCCCGGCGTCGGCAAGATGGTCGCCATCAAGAAGCTCAAGAAGGAGAGCTTCCAGGGTCACAAGGAGTGGCTGGCAGAGGTGACCTACTTGGGGCAGCTCCACCATGAGAACCTGGTGAAGCTGGTGGGCTACTGCTCGGATTCCGACAGCAACAAGCTGCTCGTCTACGAGTACATGCTCAGAGGCAGCCTCGAGAACCACCTCTTCAGAAGAGGGACGCAGCCGCTGTCGTGGGCGATGCGGGTGAACATCGCGGTGGACGTGGCGAGGGGGCTGTCCTTCTTGCACGGGCTGGAGAACCCCATCATCTTCCGGGACCTCAAGTCGTCCAACGTCCTCCTCGCCGGCGACTACCGGGCCAAGCTGTCGGACTTCGGGCTGGCGCGGAACGGGCCCACCGGCGACAAGAGCCACGTGTCCACCCGCGTCGTCGGCACCAGGGGCTACGCCGCGCCGGAGTACGTCGCCACGGGCCACCTCTCCGTCAAGAGCGACGTCTACAGCTTCGGCGTCGTGCTGCTCGAGCTCCTCACGGGGCGCCGCGCGCTCGACGCCGCCCGCGGCGCCACCGCCGAGATGCTCGTCGACTGGGCGAGGCCCCACCTCGGCGATCGCCGGAAGGTCAACCGCATCATGGACACCAGGCTCGGCGGCCAGTATCCCAAGAAGCAGGCGCAGGACATGGCGGCGCTCGCGCTCCGCTGCCTCCACCACGACCCCAAGCTCCGCCCCGCCATGCCCGACGACGTGCTGCCGCAGCTGCGCCTGCTGCAGCAGAACACCAAGCCATCCTCCTCGTCGACCTCGGCGCCGGCGCACAGGTCGAGGCCATTCCAAGCGCTAGCGAGCTAG
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| Protein seq | MGNCMGSSKCASASAPLESKVTRSSNSTTTTDNTSKASQRSSSAFSSGQFSRASSDESSAAPSLSSLKSFNMGDLRAATKNFGSNSFLGEGGFGCVYKGWIDELTLAPTKPGVGKMVAIKKLKKESFQGHKEWLAEVTYLGQLHHENLVKLVGYCSDSDSNKLLVYEYMLRGSLENHLFRRGTQPLSWAMRVNIAVDVARGLSFLHGLENPIIFRDLKSSNVLLAGDYRAKLSDFGLARNGPTGDKSHVSTRVVGTRGYAAPEYVATGHLSVKSDVYSFGVVLLELLTGRRALDAARGATAEMLVDWARPHLGDRRKVNRIMDTRLGGQYPKKQAQDMAALALRCLHHDPKLRPAMPDDVLPQLRLLQQNTKPSSSSTSAPAHRSRPFQALAS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.183826 | 5.805886 | 0.362036 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0686800 | RBH | 0.0 | 0.000000 | 0.245782 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48730 | RBH | 0.0 | 0.000000 | 0.094064 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0686800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028240 | RBH | 0.0 | 2.425264 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028280 | RBH | 0.078629 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0028080 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027890 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028170 | RBH | 0.645000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0192400 | RBH | 5.4227835 | 1.957262 | 2.1870445 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028620 | RBH | 0.0 | 0.277176 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0488700 | RBH | 0.837022 | 24.4049185 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027890 | RBH | 0.0 | 0.051678 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028360 | RBH | 0.0 | 1.861390 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0028060 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028390 | RBH | 0.0 | 0.294180 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027960 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G028020 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027790 | RBH | 0.0 | 14.517080 | 0.0 |
