Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsMH63_07G0444300 | OGI:07074680 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:28270202-28275877 | ||||||||
Gene Symbol | qHMS7 ORF3 | ||||||||||
DNA seq | TTAAAGTCTGTGATGCTTTAGCTTATGCTTCGAAAAATCTTTGATACTGCCATTGATTTTTCTGTGCCAACCCGCACCGAAGCGCAGGGTGCACACCTGGAAGTATAATGTTAGCAATAGTGTTAATTCAAGCAATTTCTAATCAATCTAGCATGTAATACTATACTCTCTCCAGCCATAAAAGAAGATCGATTTTGACTATTCAAAGTCCACAAGACACAAATTTGAACGCTAGATTCTCCCTCATAAGTCTGAAAATAGGTTAGGTAAGTGCAATGCCGTTATTCAAGCATTTGCTGTAATAAACTTGGATACATAATTTCATATGCGAAATATACATTCTAAATAATAAGTATAATAAAGTTAACATTATAGATCTAGTGAGATCAAAGATGTGCCGTTGATTTTTATCTCTTTGAGCGTGTGTTAGGGCCATATTCATGGGTGTGTAAATGTGATGTTGCATGGCCCACTCTGTTACAGAAACAGAGGTATCACTCGTCCAGAAAGCAAAGCTGACCAAGTCACCTTTACTGAGATTAACGCAAAATCAGTCTTTATTTCTTGAGTATCATAGCCATGGATTTTCTCCTTGAAGGAAACATAATGCTGGTCGAAACTGGATGGAAACGCGCCCACTTCGAACTTCAAATCTATGAAAGAATCCCTCGTTACAGCAACCACCGACCTCTTTAAATCACGTGACTCACTGATGACACCATCAAAGAGACGGATTTCCTTATCCAAGTCACTGGTTAAACAACCGAGCAACAAATTGAAACTGCTTTGCACTTCTGATATAAGAATCTCTACGGTGGCCTCAGCTGAACAATTAAAACGTGATAAAGTTATGTCAACTGCACCGTAATCGCCAGGAATGCAAATTGTTTCTGGCCGATTCCATAGGCCTCCAGAGCCTATCATTGATGCACCATCAATCAGCTGTAGGTCATCTTTTTCTTGTTCACCTGTCTTGATCCTCATGTCATATTCAATTAGAGCATAGTCCATCATGTCTATTCCTCGGTTAGGGCCTTCCATGTTGATGAGCGAACCCTACAAAATTATTATATTTAGTTGCTCTTCTTATAAAAGTAAGAAATATCTAAAGGTGGATGCTTCCTTATGTTGTTTCACTTGTAACAGCATTTACTTGAAAGGTCCTTAAAGTTGGAGCGTGGTGTCACTTAGGTCCACGATCTTGTAAAATCAACATTAAGATCCATGAACTTGTTTAAGTGAATCATTGCAGTCCAAAAACACGTCTGACCGGGTTGACCGTCCTACGTGGCAGTCTAGCGTGGCTACATGTTTGCAATTAGGCCCCTCCACGCCCGATCCACAGCCTTCATGGTGTTGGAGACGCGGTTCTTGCCGATGAGCGACATGACGGCCTCCCGCGCCTTGGTGAGCACCTGCGTGAGCGCCTCCCGACCTTCGCCATCATGTTGCCCGGCGCCGTTGCCGCCTTCGGTGGGTGTTTGTTGCAGCAGCAGCGGCGGAGGAGGGGGGACAGGGGCAGATGCACTGGGGAAGGAGAAGCAACACAAGCCGGTGCTCAAGAACACCATCGCCGGCGGCGACCACAGCGGGAACAATGACGGCGGAGGTGGCAGGGAGAAACAGCGGCGACCGCGCTGGCGTGAGCAACAACAGCAACAGCAGCGAGGAGGATGAACGCGATGTGGCGGCGCAGAGGATGGGTGATGTGGACTAGCGCAGGTACCAAGAGGACATCGAGGACAAAACCATCGCCATGGATTCCGATCCTGAGGTTCATATCGCGCCGAGTAAGCTCTTGCTCCGTTGATCTCTAGCTTTGCATGTGCCGCCGCTGACGGTGTTAGATTTGAAACTTTTTTGGTTGTTTGCGTGTGCCGCCGCTGACGGTGTCAGGTTTGACATGGCAAGGACCCTAGCGGTGCAGGAGATGGAGCAGTGGAGGGCGACGGCGCAACGTGTCAAGGTGTCGGCTCGGTGACCTCGGCGGCCCCGTCTTGGACGTCTCGGCGGCACCACACTCCACGATGCGTGTGCTGCGGGAAGGCGAGGACATCGGCACGACGCCTGTCGTCGACTCTTTCGAGTGGAAGGATGCGGCCACGTACACAATGCCTGAAGGCAGCGCTGCCGCCTGTCGTGTCCGGCGTGACGTACACCGACAAGATCAAGTTGGCAGCGACATGCACCACGGAGAGTACAGCAAGAAGCTAGCCACCACAATGTACGAGAAGGTCGCCGGAGTCGGGACCGTCGTGGACTCGTGGCTGGCAAGGTGCAGCAAGTGACGCAGTCCGCTGGCACCGTGATCTCAGGCATCAGCGGCACCTCGTAGTCACAGGGTACCGCGCAGGACTCGGACGCCTCCACCACCCTTGCCTCCGGCGAGCCAGCGACCGGGCAGCAGCAGGACAAGGGGGCGACGGTCACCGGCTAAATCGCCGACATGCTCCGTCGGGGCGATGAGGACCGCGTGCTCAGCGAGGCGATCTTCGGCATGGTGCAGTGGCGGAAGGAGGTCGTGGCACAGCGCGTGCCGGCGGTGGCGGCAGCGGTGCCGGGCGAAACGATGATGAAGATCCGGGAGGCACTCGCATAGGTGCTCGCTAAGGTGCGGGAGGCCGTTACGTCGGTCATCGGCAAGAACCACATCTCCGACACCGTGAAGGCCGTGGATCGGGCGTGGAGGGCCTAATTGCAAATATGGAGCCACGCTGGACTGCCACGTAGGACGGTCAACCCAGTCAGACGTGTTTTGTACTGCTATGATTCACTTAAACAAGTTCATGGACCTTAATATCGATTTTACAAGATCATGGACCTAAGTGACACCACGCTCCAACTTTAAGGACCGGTGGTGTATTTTACTCTTTTTACAACTACCAAGATCTTCATCATGTATCAAACAAAAGAAAAAAAAATTATGTAGGGTACTAAGCAACAACAAAGTGTCCAAAACTATTTAACATGATTTTTCTTTGGAATACATGTGTTCCTTAGTTTCATAATTTAAACCTGTTCTCATAGTAAATCATCATTTCATAATATAGAGTACACTCCCTATGTAAGGTGCGTTTTGGAAGGAGAAATTCTTGAAAAGTAGAATTTTGACCTTTAATTTCTCTATCAATATATCACCAATTGCAATAAAATTAACATCTTAAAAGTAATTCGAGTACCAATAATTTGACGATTTTTGCCAAAACTCATGAAGTATGAATTTTCCAAATCAAAATACACAATGATATTTCTAGATAAGTCGGATGTGTACCTGCTCCACAATGATGGGATCATCCCTGCTACAGTTGACAATATAATTAAGCAACGGATCTAGATCATCCCGCACAGCTATGTATCCATACAACTCTACTGAACCACCATCCAGTGTAATTTTAGCCAACTCCAATGATAAAATTTGCAGCATGTTGCAATGAACATGTGACATGCAAGTTCCATTACTGCGAATGACACAATTTGTGGGATTCGAAAACCTCATTGCCTCCAACCGAGCTTCAAAAAAAGTAAAGTCATAATGTAAGTTTGTGACCGGAAATTAATACAGTGAACAAACACTTGACATTTGAAAAGTACATGTGATATTTGATGATTATATGGCCTTATTGGATTTTTTTTTCCTTTTCATCTACAAAGTAGAAACAACCTATGTTCTTTTTACTAGGAGAGCAACATCTATCCTAGTATCAACTACAAGAAAAAAAAAACTCAAGGGCAGACTACCTCTTCAGAAAGCCAGGTATATTCTTTCCTGTACCAGCCTTTTACCTCTACAGAAAACCACGTGTTTTGGGAAGTGGTCTATATTTTGGAAACTGGCAACCCGCTCCTCATATTAAACAGGGGCATTTGAATGTTTGGTTGGCCCCTTGAACACCTAGTAGTCCTTTAGGTTATATATAGTATGTGAACTGCCTGAGTACTTTCTATTATTGCTTGTTGTTGCTCCCTGCATGCTTGGAAAACTTGTACTATTACTGACAGTTTGTGGCTGCATGTATGGAGAATTTAAACCTAATGGCAATTACAACAGTGTGGATGCGATATTTAGATTATTATTTGCACTTATAGTTGTCATTTTCTTGTGTATTCTGCTATTGAAATACATGCTCAAAGGCTGTGTGATCACCGTGTTGCAAAGTTCAGGGATAAAGTACTTTGGACATTTATGTAATTAAATGGCATGGAATAAGGTCCTAGTCCATGTCATCAGAACTCTGCATGCAACCTCAGTCCCTCCCATCAGGCTGTGGCGCAGATTGCTATGTATGCAAATGGTGCTAAGCTGAAGGGCCAGTAAAAGTAAAGTACAAGGCTTGGGGTGGAAGTGTTACTCTCATCCACGTTTAAGGACCTCCAGTACAATTATCTCATAGCTGAAAAGAGTGTAAGGCGGGTAAAATTATGGCAGTGCTGCATAGCACCACATATACAATGATCTCTAGGATCGCAATAAAATATTTATAGATATGGAAAGAGATTCGTTATGTTCAAGGAAACAAATTATCTCTAATAAAAAATAATATAGCAAATAAAGATAGAGAAAAGATAGCTTACTCTCATTACGGTCTGCAATATGAAACTCCCTTTTCCACGGTGTGTCCATGATGTCCCTATATATAGAGCCATCACGGTGTCTACTTTTTGGAAGTATGTTGTTCACAGTATATTCTTCAGGATCAAGAACTTCGTCCTCCTCAACATGTTCCTCCGTTTCACTCCTTCGATCATCCTCATCACAGCCATCCTGCTTCGCACTTTGCCCCAGTACATCGTATTTGATGTATGAAACCTCTGAGGACGCCGCATCTCTATTACTTTTCTCATCTCCAGCTCTAGCCTCCAAGATTGTGCCCCTGGTGTCAATGGTTTTCATACCTTGAGTGATCGCAGTATGCTTCTTTTCCTGGGATGGAAGTCGCCTGTATGACTCGTCGCCTTTTACTCGACTGATGGTGGTCATGTTCCGAGGTTCCCAAGGAAATCTATCATTAATTAAGAGAATGAAAAACCAATATCAACAACTAAAATAAATAAGACGGTACCATCAGTCAGGATTGAGATCATCTAACCCTGAAATCGATAATCGATTTCTAAATTTTTTTTCTCGATCTCCTTTGTCTTTGTTTCGAATTAGTTTAAAGAAACTTATTTTCCACAACTACCTTCAAACAAATGAAAACAAAACCCAAAGTTTTTTTTTTTTTGCGAGGAAAACAAAACCCAAAGTTGATCGCAGATCCAAAAACTGTGGCAAAAGACGCAAACTTTAGCATCAGAACAAGGAAAAAAAACACATGCCCAAAAAATCTGTCTATGAAAATCATGCCAAAACTGTAGTAATAACCAAGTAAAGGCGCAGACTTTAGCATCGATCAGCACAAGAAAACACACCGGGAAACACGACGGACGACAGGTCCTCCTCGAGCAAGCAATGGTGACCACCAGCACCAGCTAGCCGCTGCAGATGCCATGAGAGAGGGAGAAGAGATGAGGCGGTGCATCGGGGCAGGAGATCGGGCGGCGGCGTTAGAGCGTCGGAGCAGACGCGGAAAGCGGCGGAGAATTCGCATCTGGGCGGCGGCGGGGGTTAGGGGGAATAGCCGTGCTGTGGCTGCGTGGGGGATTTCTGTCATCATCAGAAACGGGCATCATGTGGAT
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CDS seq | ATGATGACAGAAATCCCCCACGCAGCCACAGCACGGCTATTCCCCCTAACCCCCGCCGCCGCCCAGATGCGAATTCTCCGCCGCTTTCCGCGTCTGCTCCGACGCTCTAACGCCGCCGCCCGATCTCCTGCCCCGATGCACCGCCTCATCTCTTCTCCCTCTCTCATGGCATCTGCAGCGGCTAGCTGGTGCTGGTGGTCACCATTGCTTGCTCGAGGAGGACCTGTCGTCCGTCGTGTTTCCCGATTTCCTTGGGAACCTCGGAACATGACCACCATCAGTCGAGTAAAAGGCGACGAGTCATACAGGCGACTTCCATCCCAGGAAAAGAAGCATACTGCGATCACTCAAGGTATGAAAACCATTGACACCAGGGGCACAATCTTGGAGGCTAGAGCTGGAGATGAGAAAAGTAATAGAGATGCGGCGTCCTCAGAGGTTTCATACATCAAATACGATGTACTGGGGCAAAGTGCGAAGCAGGATGGCTGTGATGAGGATGATCGAAGGAGTGAAACGGAGGAACATGTTGAGGAGGACGAAGTTCTTGATCCTGAAGAATATACTGTGAACAACATACTTCCAAAAAGTAGACACCGTGATGGCTCTATATATAGGGACATCATGGACACACCGTGGAAAAGGGAGTTTCATATTGCAGACCGTAATGAGACTCGGTTGGAGGCAATGAGGTTTTCGAATCCCACAAATTGTGTCATTCGCAGTAATGGAACTTGCATGTCACATGTTCATTGCAACATGCTGCAAATTTTATCATTGGAGTTGGCTAAAATTACACTGGATGGTGGTTCAGTAGAGTTGTATGGATACATAGCTGTGCGGGATGATCTAGATCCGTTGCTTAATTATATTGTCAACTGTAGCAGGGATGATCCCATCATTGTGGAGCAGGGTTCGCTCATCAACATGGAAGGCCCTAACCGAGGAATAGACATGATGGACTATGCTCTAATTGAATATGACATGAGGATCAAGACAGGTGAACAAGAAAAAGATGACCTACAGCTGATTGATGGTGCATCAATGATAGGCTCTGGAGGCCTATGGAATCGGCCAGAAACAATTTGCATTCCTGGCGATTACGGTGCAGTTGACATAACTTTATCACGTTTTAATTGTTCAGCTGAGGCCACCGTAGAGATTCTTATATCAGAAGTGCAAAGCAGTTTCAATTTGTTGCTCGGTTGTTTAACCAGTGACTTGGATAAGGAAATCCGTCTCTTTGATGGTGTCATCAGTGAGTCACGTGATTTAAAGAGGTCGGTGGTTGCTGTAACGAGGGATTCTTTCATAGATTTGAAGTTCGAAGTGGGCGCGTTTCCATCCAGTTTCGACCAGCATTATGTTTCCTTCAAGGAGAAAATCCATGGCTATGATACTCAAGAAATAAAGACTGATTTTGCGTTAATCTCAGTAAAGGTGTGCACCCTGCGCTTCGGTGCGGGTTGGCACAGAAAAATCAATGGCAGTATCAAAGATTTTTCGAAGCATAAGCTAAAGCATCACAGACTTTAA
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Protein seq | MMTEIPHAATARLFPLTPAAAQMRILRRFPRLLRRSNAAARSPAPMHRLISSPSLMASAAASWCWWSPLLARGGPVVRRVSRFPWEPRNMTTISRVKGDESYRRLPSQEKKHTAITQGMKTIDTRGTILEARAGDEKSNRDAASSEVSYIKYDVLGQSAKQDGCDEDDRRSETEEHVEEDEVLDPEEYTVNNILPKSRHRDGSIYRDIMDTPWKREFHIADRNETRLEAMRFSNPTNCVIRSNGTCMSHVHCNMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDDPIIVEQGSLINMEGPNRGIDMMDYALIEYDMRIKTGEQEKDDLQLIDGASMIGSGGLWNRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSFNLLLGCLTSDLDKEIRLFDGVISESRDLKRSVVAVTRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKVCTLRFGAGWHRKINGSIKDFSKHKLKHHRL |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_07G0444300 | OsMH63_07T0444300-mRNA-1 | Chr07 | 28270202 | 28275877 | - | maker | ||
CDS seq | ATGATGACAGAAATCCCCCACGCAGCCACAGCACGGCTATTCCCCCTAACCCCCGCCGCCGCCCAGATGCGAATTCTCCGCCGCTTTCCGCGTCTGCTCCGACGCTCTAACGCCGCCGCCCGATCTCCTGCCCCGATGCACCGCCTCATCTCTTCTCCCTCTCTCATGGCATCTGCAGCGGCTAGCTGGTGCTGGTGGTCACCATTGCTTGCTCGAGGAGGACCTGTCGTCCGTCGTGTTTCCCGATTTCCTTGGGAACCTCGGAACATGACCACCATCAGTCGAGTAAAAGGCGACGAGTCATACAGGCGACTTCCATCCCAGGAAAAGAAGCATACTGCGATCACTCAAGGTATGAAAACCATTGACACCAGGGGCACAATCTTGGAGGCTAGAGCTGGAGATGAGAAAAGTAATAGAGATGCGGCGTCCTCAGAGGTTTCATACATCAAATACGATGTACTGGGGCAAAGTGCGAAGCAGGATGGCTGTGATGAGGATGATCGAAGGAGTGAAACGGAGGAACATGTTGAGGAGGACGAAGTTCTTGATCCTGAAGAATATACTGTGAACAACATACTTCCAAAAAGTAGACACCGTGATGGCTCTATATATAGGGACATCATGGACACACCGTGGAAAAGGGAGTTTCATATTGCAGACCGTAATGAGACTCGGTTGGAGGCAATGAGGTTTTCGAATCCCACAAATTGTGTCATTCGCAGTAATGGAACTTGCATGTCACATGTTCATTGCAACATGCTGCAAATTTTATCATTGGAGTTGGCTAAAATTACACTGGATGGTGGTTCAGTAGAGTTGTATGGATACATAGCTGTGCGGGATGATCTAGATCCGTTGCTTAATTATATTGTCAACTGTAGCAGGGATGATCCCATCATTGTGGAGCAGGGTTCGCTCATCAACATGGAAGGCCCTAACCGAGGAATAGACATGATGGACTATGCTCTAATTGAATATGACATGAGGATCAAGACAGGTGAACAAGAAAAAGATGACCTACAGCTGATTGATGGTGCATCAATGATAGGCTCTGGAGGCCTATGGAATCGGCCAGAAACAATTTGCATTCCTGGCGATTACGGTGCAGTTGACATAACTTTATCACGTTTTAATTGTTCAGCTGAGGCCACCGTAGAGATTCTTATATCAGAAGTGCAAAGCAGTTTCAATTTGTTGCTCGGTTGTTTAACCAGTGACTTGGATAAGGAAATCCGTCTCTTTGATGGTGTCATCAGTGAGTCACGTGATTTAAAGAGGTCGGTGGTTGCTGTAACGAGGGATTCTTTCATAGATTTGAAGTTCGAAGTGGGCGCGTTTCCATCCAGTTTCGACCAGCATTATGTTTCCTTCAAGGAGAAAATCCATGGCTATGATACTCAAGAAATAAAGACTGATTTTGCGTTAATCTCAGTAAAGGTGTGCACCCTGCGCTTCGGTGCGGGTTGGCACAGAAAAATCAATGGCAGTATCAAAGATTTTTCGAAGCATAAGCTAAAGCATCACAGACTTTAA
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Protein seq | MMTEIPHAATARLFPLTPAAAQMRILRRFPRLLRRSNAAARSPAPMHRLISSPSLMASAAASWCWWSPLLARGGPVVRRVSRFPWEPRNMTTISRVKGDESYRRLPSQEKKHTAITQGMKTIDTRGTILEARAGDEKSNRDAASSEVSYIKYDVLGQSAKQDGCDEDDRRSETEEHVEEDEVLDPEEYTVNNILPKSRHRDGSIYRDIMDTPWKREFHIADRNETRLEAMRFSNPTNCVIRSNGTCMSHVHCNMLQILSLELAKITLDGGSVELYGYIAVRDDLDPLLNYIVNCSRDDPIIVEQGSLINMEGPNRGIDMMDYALIEYDMRIKTGEQEKDDLQLIDGASMIGSGGLWNRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSFNLLLGCLTSDLDKEIRLFDGVISESRDLKRSVVAVTRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKVCTLRFGAGWHRKINGSIKDFSKHKLKHHRL
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.01339 | 0.0292435 | 0.03082 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0646600 | SBH | 5.391610 | 7.144322 | 8.804140 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g45194 | SBH | 2.855486 | 3.775033 | 1.780208 |
Nipponbare | IRGSP 1.0 | RAP-db | Os07g0646600 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025390 | SBH | 4.494284 | 19.975655 | 17.351009 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025460 | SBH | 0.679900 | 1.785434 | 7.494068 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025290 | SBH | 5.052930 | 5.726491 | 22.455086 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0025310 | RBH | 1.124307 | 0.675823 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025560 | SBH | 17.885160 | 28.032761 | 37.332256 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0444400 | RBH | 22.604575 | 14.355679 | 15.064616 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025970 | SBH | 0.488104 | 0.743422 | 2.358422 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0456200 | RBH | 11.4285275 | 3.7965805 | 11.675303 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0025290 | SBH | 1.043172 | 0.276753 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025510 | SBH | 0.000000 | 5.455245 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0025360 | RBH | 0.000000 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0025500 | SBH | 0.675070 | 1.235354 | 1.293433 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0025220 | SBH | 0.882515 | 6.854999 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025210 | SBH | 1.325499 | 6.854395 | 5.749860 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0025220 | SBH | 3.998436 | 12.296475 | 18.326708 |