Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0168400 | OGI:07015200 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:9603938-9607005 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCGAAGGAGTTTATTGTGCTATGCTGTGGAGGAGGTTAAAGAGGTTAGCTTGTGATCTAAGAAACTGGAAGTTTATTGTGCTTTTGTCCTGTTATCCTTCATTATTGTACATGTTGTCTTTTACAGAATGCTACTCAGAAAAGTTAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACTAGGTTGAGGAAATTGGTATGTCTGTTTCATCTGTTTTTACTATGAAAAAGGGATGCTATGTGTATTTTGCAAGTTACAGATAATAGTTAGCTCGTTTGAGCAATAAATATATTAAGTTTTTGATGCTAGTGAGGTTTTCCTCACCAACAAGAAAGAATCTTTTTGTGGTGAAGTCTTTTTCCTTCAGAAAGGATTTTTGACTGATGTATGTTCATCCTACTTATAGGAGTTGAGCACCTTCTGATGGATGTCAAGGACACAACAATAGGCACGCTTGCAACAGAGGTGATATTTCACAAGAATACGCATTTTCAGCCTACAAGTTGCTTTATTATGCCCTAATATATCGTTTATCATTGTTGTCATTAAAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCGAGGCTCAGAGAGATCCGTAGGTACTTAGATCTTGTAATTTAAGGGCAGCTCGGACTGAATCATGAGATTTTGTACCACTTGCAGGTTCGCCTTCTGCTCATTGCTTTCTGTATGGTATTCTTATGAGTTACATATACCTCCAATTCTCTTGCATTTGCTATATTAGGAGGTCAGCACTTGAAAGCTATCTCATTTTACCGTCCTTTGGTTTTATGGAATATTTGTGCCTTTGAGATATACCCCTCTATTATTGTGGTGGTTCGGAATTCAGTATCAGTATAAATATCACTCCCAACTCAAATAAAAAATTGATTATTTGTGGAATATGCTGCCACTGGTAGTTTATTGCCTTGTGATGCTTCTGGTAGTTTTCACAATACATTGGACACGGGATATATGAAGAGATCTTTTGTATGGTCAAATCTGTTTTATGTATGGTTGTTATGTGTCGAAACTAGATTTCGGCAATAATAAAAGGGGGTGGCTATCAAGCTAGAAAAGTGTATGGGTTTGGAGACAAAGGATTTATACAGGTTCAGGCCTTCTTATAAAAGAAGTAATACCCTACTCCTGTCCGGGGATGATTCCGCCGAGTGTATTATTAATTGTATGATTTGGAGAAAATCAACATATGCCCCTAGAGGCACCCGGACCCCCCTTATATATGAAAAGGAGTTCGGGTTACAAAAGACAATCCCTATCCCTAACGGAACAGGCAGATACAGATAAAATACAGTCGTGACCGACTAAACATCAAGGTAATTCCTTGACGTACAAGTTAAGAAACCAATCCGAAATACAGATAAGATATCCCATCCATATTCGGTATCCTATATTCAGCCCAAATACCATCGCCGTATAGATATGGGGTATACATAATACCCACATTATGATTCGTAATGTCCTCTATTTTCATGAGGAACGTGTTTTTTTCCCCTGTAAAAGAATGAATGAATACAGGACGGTACTAATGCGTGGTAATGCTTTACACTAGGTGGAAAATACAACGATATAACTACTTGATATGTCTTGAGCTTTGGTCCCCCCAGTATTTTTTTGATGTGTAAGCTAAGCAACATTGTTTCAGGCCTCTTGTTTCCTAGATGGACAATGTGTAGTACTGCGATATGTTTGGAGATTTTTGGATGTGGGGTGATGTGAATATGTGAATTGATGTTTGGAGATGGATAGCATATATTATGTGAATTGATGTGGGATTTTTGTGTGTATGGTGGATTGATTGAATGGACATACTGTGAACTGGCTACTTTTTTTTTTTTTGGCTACAAGATTACAGGTGCCAGTTATTAACACCAACCGACATCTATAAGCTTACGAGTGGAGCCCTTACACCATCATTGGTGCTGGTTCTTTATCAAAACCGGTACTTGTAATACCATATAGGTGTCGGTTTGGGAACCGGCACCAATGACACCATCATTTGTGCCAACTAGTTGGTGTCGGCATGGAAACCGGTACCTTGTTATTGTTCGTTGTAACTATGCTGGTAAAGAAAAAGCTGATTAACTCAAAAACCCGTAGTAAGTGACAGTACTCTTGGGTAACATCTTGTTTGCAAATTTATGTGTGGTAAAAACAGCATACCCGCGTACATGTCATCTACCAATCCAATCGCCATGTGCACATTACTGACTGTACTGACAACTCCTGATTTTCTAGTGAACCAGCAAAGGTAGCCTTAGAGTGGGTACAATAGCAGGCTATAAGCCAGCTATAAACATATTTTAAAGAGATAAAGGAAAAGAAAAGAACTGCGGGCTACAAATCTGTAGCCAGCTACAGTACGGACTTTAAGACGTAATGTGTGTATAATAGATGGGACTAACTATTAATAGTATAGTAAACAACTATTGTATGAATTTGGCTATAGATGATTTAAAGCTAGAATTGAGCTATACTATTAAACTTGCTCTTATATCACCCGTCGTTATGAGAGGTGAACCATCTTCCATTTTAAATTGGTATGAAGTTTTCAAAACTGAAATTCATTAAAGAATGAGAAACTACTGATAATCCCAATGTATGCATAAGATAATATAGATAGAAAAAATAAACCATGTGAACCAACCACCCAACCTTTCCTCATATTCTATTTACTAGAACACTACTCCATCCGTAAAAAAAAACCAATTTAGTATTAGATATGACGTTTTCTAGTATGACTAAATTTTTCACTAGAAAACGTTAGATTGAGTTTTTTGGGACAGGGGACTACGTGTTTCTTTATCTTAACTAATTTCTTAACTAATTAAAAGATTTGTATTTTTCCAATCGTCACCTCCTCCATGCGCTGTAATTTCATCCGCCCCCCCCCCCCCCCCCCCCCACACCACCACTCCCAAAATCGTAAAAATATAATCGGACAGGGAAAACTGAAGCTTTATACACACAAATTTTATACAAAATAAAAG
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| CDS seq | TATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCGAAGGAGTTTATTGTGCTATGCTGTGGAGGAGAATGCTACTCAGAAAAGTTAAAAGGAGTTGAGCACCTTCTGATGGATGTCAAGGACACAACAATAGGCACGCTTGCAACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCGAGGCTCAGAGAGATCCGTAGGTACTTAGATCTTGTAATTTAA |
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| Protein seq | YVPNPVLVIIDVQPKEFIVLCCGGECYSEKLKGVEHLLMDVKDTTIGTLATEVTSKLAALKGLDARLREIRRYLDLVI |
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| Function | 26S proteasome non-ATPase regulatory subunit 7 homolog A [UniProtKB/Swiss-Prot:O24412] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0168400 | OsMH63_07T0168400-mRNA-1 | Chr07 | 9603938 | 9604861 | + | maker | ||
| CDS seq | TATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCGAAGGAGTTTATTGTGCTATGCTGTGGAGGAGAATGCTACTCAGAAAAGTTAAAAGGAGTTGAGCACCTTCTGATGGATGTCAAGGACACAACAATAGGCACGCTTGCAACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCGAGGCTCAGAGAGATCCGTAGGTACTTAGATCTTGTAATTTAA
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| Protein seq | YVPNPVLVIIDVQPKEFIVLCCGGECYSEKLKGVEHLLMDVKDTTIGTLATEVTSKLAALKGLDARLREIRRYLDLVI |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0168400 | OsMH63_07T0168400-mRNA-2 | Chr07 | 9603938 | 9607005 | + | maker | ||
| CDS seq | ATGGGTTTGGAGACAAAGGATTTATACAGGTTCAGGCCTTCTTATAAAAGAAGTAATACCCTACTCCTGTCCGGGGATGATTCCGCCGAGTGTATTATTAATTGTATGATTTGGAGAAAATCAACATATGCCCCTAGAGGCACCCGGACCCCCCTTATATATGAAAAGGAGTTCGGGTTACAAAAGACAATCCCTATCCCTAACGGAACAGGCAGATACAGATAA
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| Protein seq | MGLETKDLYRFRPSYKRSNTLLLSGDDSAECIINCMIWRKSTYAPRGTRTPLIYEKEFGLQKTIPIPNGTGRYR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.842002 | 1.2086935 | 5.8387475 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0009930 | RBH | 0.036769 | 0.535029 | 2.081076 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0009700 | RBH | 4.613838 | 15.642239 | 6.300238 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0009680 | RBH | 0.351306 | 1.855578 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0009740 | RBH | 0.252558 | 1.070191 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
