Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0100400 | OGI:07016990 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:5928084-5933223 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTGAAGCATCTTAGGGGTAAAATACGAAGCAGCTTGGAGGCACCATAACACTTCCACTTGGTCCTTACATGGCATGCAACTGAGCAAAGATCAGTTGAAGTTGATCTTCATGTTGGAGCTAGTCCAATATTTCTGAAGTGATATTTATACTTATCCAGTATCCCTCTCATGTTTTGGTCTAATTGTCTCATAAAGGTGTTCCACTGATTATATGCATATTGTACATACTATATAACAAAATGATACAGCAAAACAGATATATCAGCCAAAGGACCAGAATAAAAGTGTGCGAAATTTGAGTGAATATAAAAGGTGGCAAATTACAGGTCAATGAGACAATGGCAGCTTATGGAGGTTAATATAGACCATATACCAGAAAAAAAATGCTTTCAACTTTGTACCATACACCAGAACACATGGAATCGTTTTTTTTTTCTTGCAACTGCTATATAAGCTAATGATCACAAATTACCCCCATTAACCTCAAGCTGAAGCTATCCAAATCACCTCAACTCTTCATAACTCGAACCAAATGTGGATAGCTAAGCTCCTTAATTTCACTCATGCCTCTCTGGAACTGACAGAAAACCTGTGGAGCACCCACTTGAACCATATCAACAACGTTAGCATCTGTGTAATGTGTCCTTTTTTCTTCATCAAATGCCTTCTCTGGAAGGTGAACCATGCAATGCCTTATGAGTTCAATTAACTTTCTTCTTGTATCCAAACTATAAAATCCGGTTTCGACTCTCCATCTTTCAAAGATCTTTGCGACAAACTTGTTAGCAAGCATTGCACTCCCTATGTTACGAGGGAGGGTGATAAAGCTAACAGCAATCTCTGTTCTATACTCTCTGGTTGTCTTTCCGTGCTTTTCTCTGTCCTCTCTATTGAGCTGCTCATATTGAGTGAACATGGTTAAAGTCTCCTCTCTTTTCAAGATGTCATCCATGAGACAGAAATTATATCTTATCAAGAACTGATGTTTCACTGGGTCATCTCTCATAAGGTCCAACAAATATTCCAAATCTGCGGGGATTTTAACTTTACACTCCTCCAGCACTTCTATCATGATTTCGCAAAGTTTTTGGTAATCCAGTCTCATTCTTTTAAGTTTCCTCCGTAACACAGACCTCTTCAGTTCAGCACTAAACTTCACCTTTTGACTCAAAGTCCAACAAAAATCTTTCAAGGAGAACTTTCCATTCAGACATAAACCGGACCGATGCAGCCTGTAGACATCCTCAATCATGCCAAGAAATACCACCTTACAAAATGGTGACATTTTAGCCAACGTATCTACTTTCCAAGAATGATCTGTTGTGGCACCAGTTATCTTAACTGTGTATAGAAGCTTGCACTCAGATCTACACAGGAGTTCTTGCAATTTCTCAACATCAACCTCATTAGGGCATAAAAAGATGTCATGACAGTATCCAAGCTTCTCTAGAACGTTCCTTGAAATTCTTTCAACAGCTCTAGTACGGAGCGACCTTTTCAATTTCCTGTTTTCTCTCAGAATTTCACTATTCATTGACCTGACCTCATCCAGCTGCTGTCTAGCACATTCCAACTCGTGGACAAGGTATTCTTTCTCGTCTAGAACCTCTTTCAAGCGAATCCTATAAAAATACAGGTCGATATCCTCATCTGATTTGGTTGGCTGAAAACATAGGTCTCAATTAGTTAGAAAAAACCACATGGACCCTTCAATTTGTTAGGGAAAGAAAACTACAACAGGAGCTTCTACTGTGATAGGTTTTTTAATGACTGATATGACTATATTTCAAAATTGAGCATCAAAGCCACTACATCCAAACCAATCAGAGTCTGGGCACATTGAAGATCCAACATTTTCAAGATGTGCTTTAATTTGCCGACCATGCCAAAGCAGTTAGAAGTTTTAACAGAATTGAATATAGAAAGTTAACACAGACCATAACCGAACAAACAATAGAACTTACAACACTGAATAATACCTGTTTTTCACGTGGCCTATCAGAAGAACAACTTTCTTGGAATGTTGGTCTTGAATCAGAGTCAGCTGCATAGGAAAAAGTATTTCTCAAGAAATGATAAAAGATGAAGTATTTACAACTTAACAACACAAACACATATATAAAAAATCCTAGGACAAACTTAAATGCAACAAAAGGTATTACTTATTAACACCCATATTTGGCATCTTAAGTGAAAATAGCAAGATATGGTCAAATTTGTAGAGGACCCGGCTTGCTGCGCGAGGCCGGTCTGACCGCCGCCATAGGGCCGATCAGACCAACGGTGTGGGGCTAGTTTGACTGGCGGTATGTAGCCGATAAGACCGGCAGGGTCCAGTTCTGAGTCTAGTTTCATCGGTTCTCGGGATTTTTTTGCTTGGGTTGAGGTTTTTCGAGTCCTAATTGGTTTCTACACCTAGTGGGACGTGGAGAGGGTCCTGTGGAGGGCCTGACCAACCCCTTTATAAGGGTCATGGCTGGTTCAATTGAGATACACAATGTACAACAACGCAATTTGCTAATTGAATCGTTCTTTCAATAAAGCATCTACTTTTTGCCTAGCTTTTAGCCTAGTTTGTCTATCTTCGTTGGTTTGTGCTTGTTGGAGAAACGGGAACCAGGGTCCCCTTTTCCCCAGGATCATGAGACACAGGGGCCCACAAAAATCACTTTCTACCACATACATATATGTATCTATAATTCGTTGCCAGGTCAGAAACCACGGAAGTGGAGGACAACAGTTGGCGAGGAATGGGGACCTGGGCCCTTATCCAAATAGGGCCCGGGGCACCGACACTTTTGAAAGTTTTCATTTATTCGTCTTCGCCGCAAGAGTGCAAGTACTCTTTGTAGGTTAGTCCTGAAAACGTTCCGCTCCACCCATGATATGGGTTTTTCTCCCTATTCGTCTAAATCCGCTCCGCTAATTGGTTTTGATCTCTAAACCCGTCTTGACCAGGGGGTTTCTCAAGGTTGAGGTGGTTGGCGACTCCATGCACCACAAAGCCTTTTCTAGTTCATATTGGGTACTAAGTTCACTTAATTGGACTGGAATAGGTCGATGGGTACCAGATTGACCCCCAGTCCGCTCTCATCCCTACTAAATATTTATATGTACACTTGGTTAAGATCATTTTAATGTAAACTGAAATAGCTTATTTGCTCTGATAAAAAAGAGAAAACATATCAAAATTTATCGTAGTGGTTTACCTCGGACTAATAGGGGCAGGGGATCATTTCTCAAGCTTTCTTCTACTTTTTCATGGCACACAGTACGGATTTCCTCTTCACATCTGTCATCATAAGCAGCAAAAAATGATGAGGTTGATTCCCTAATAAAATATTAAACAAAAAGTATACCGGTGTTATAATCAGACCCAACAAAAAATTTCTGATGGATAGGAGTTTAGCAGACTGTAATAAAATGAACAAAAAGTAACTTCAAAGAGACAATTATCTATACTCTATAGGGTGTAGCTTCTGGCAGAAACTAAGCCTTCAGTTATAGCATCTACAGATTAAGAAAAATTCAACACAATAATCACAACATACATCTTTCCAAAGCTGTTCTGGGAACACTCATTTGTTTTGTAGCCAGGATAGATGAGCAGAGATCCTGATTGCTGGTCCTGGAGAAACAAAAGTGTCTTAGCAGAAAAACAAAATAAACCATCAAAAGAATTAGTCATTTTGTTTCCTGCAACTAAAATCCAAAAATCACATATCAATCATCTGGTTCTAGTCTTCTATCATGAATGTGAGATTGACACGTTGCTTAAATTCTAAAATTAAATTGAATTTATTGAATGGAAATCCATATTAACAAGAGTGCTCCATTGTTACAAGCATTGTTACAAGCATTTACTAAAATCCAAAAATCACATATCAATCATCTGGTTCTAGTCTTCTATCATGAATGTGAGATTGACACGTTGCTTAAATTCTAAAATTAAATTGAATTTATTGAATGGAAATCCATATTAACAAGAGTGCTCCATTGTTACAAGCATTTACTTTATAATCAGTTCATTAAACATATCTTTGTAAGAGCAACTAAATGAGGTAATATAAAACACATTAAGAGCTAATAAGTAATAACTAAAAAAGAACAGTACGCAAATTCAATGTGTCAAAAGAGAAAGGTGAGATGCAAAACATCCATCAAGTCAAATAATCTGAAATTACTTCTGCAATTATAATGCTGACAACATGCTAACACATCCAACAGTTAAAAGTGTGCAGGAACTAATACCACTCAATTTAGTAATTCATTACAGCCACGCTTGATGGAAACAGAGAGAAATTAAGCAATGGTTTATTGGAAATTAGCCGTGCCTAGAGAAGAGGATGGACGCCTCACTGCCGCAAGGCCATTAACTGATCAGGATCAAACTATGACTGCCAAAAACATCTCCAACTAACCATCTCAATTCTTACAAGTTACAACTATGAACCAGATGATGAGAAGTTGAGAACCCACGCAATTCCAAAACGATCATAGAACATCGACGCGCGGGTTAGGAACACACTTGCATTGCCATAACACGATCAAAAACAACAAGCGATCGAATGATACGGGGGAGTCGAGTACGCACCACCACCTCCTGATCGGGCTTCTCCTTGTCAAACTTGGAGCACGAGGACTTGTTGATGATGTCGCTGGCCATCTTGTCGTGCGGAGAGGAGAGTTTATCACCATCTGCGCCGTGCTCGGCCGCCGCCGAGGACGACGCCGAGGTCGCGGAGGCGCAGTCCATGGCCGTGGGCACCCCCACCTGCGGTGCCCCAGACAGCGTCGTGCCGTGGGTGGTCATCATCTCGACGCCCCCGGAGGACTCGGCGGGACGGGGCGACGACGCCGGGGTGGAGGAGGAAGCCGCCGCGGCGTCCATGGCGCCCTTGGGCTCTTCCGCTTCAGTAGTTAAGTCCCGCTTGCCCTGCAATCGAGAGAGACATCAGGAACACACACCCGTGAGTCGTGAGCGTAGTTGGTGCCGGAGAAGGAGAAACGAGGGACGGCGTACGAGGTCGTGGCGGGGAGGCATTGGGCGGCGGCGCCGCCGCGGCGGAGGAGCAGCCCGACACGGCGGATTCTGGAAGGTTCGGCGTGGGGAGGAAGACGGCTTCGCGGGGAAATGACC
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| CDS seq | ATGCCTCCCCGCCACGACCTCGGCAAGCGGGACTTAACTACTGAAGCGGAAGAGCCCAAGGGCGCCATGGACGCCGCGGCGGCTTCCTCCTCCACCCCGGCGTCGTCGCCCCGTCCCGCCGAGTCCTCCGGGGGCGTCGAGATGATGACCACCCACGGCACGACGCTGTCTGGGGCACCGCAGGTGGGGGTGCCCACGGCCATGGACTGCGCCTCCGCGACCTCGGCGTCGTCCTCGGCGGCGGCCGAGCACGGCGCAGATGGTGATAAACTCTCCTCTCCGCACGACAAGATGGCCAGCGACATCATCAACAAGTCCTCGTGCTCCAAGTTTGACAAGGAGAAGCCCGATCAGGAGGTGGTGGACCAGCAATCAGGATCTCTGCTCATCTATCCTGGCTACAAAACAAATGAGTGTTCCCAGAACAGCTTTGGAAAGATATGTGAAGAGGAAATCCGTACTGTGTGCCATGAAAAAGTAGAAGAAAGCTTGAGAAATGATCCCCTGCCCCTATTAGTCCGAGCTGACTCTGATTCAAGACCAACATTCCAAGAAAGTTGTTCTTCTGATAGGCCACGTGAAAAACAGCCAACCAAATCAGATGAGGATATCGACCTGTATTTTTATAGGATTCGCTTGAAAGAGGTTCTAGACGAGAAAGAATACCTTGTCCACGAGTTGGAATGTGCTAGACAGCAGCTGGATGAGGTCAGGTCAATGAATAGTGAAATTCTGAGAGAAAACAGGAAATTGAAAAGGTCGCTCCGTACTAGAGCTGTTGAAAGAATTTCAAGGAACGTTCTAGAGAAGCTTGGATACTGTCATGACATCTTTTTATGCCCTAATGAGGTTGATGTTGAGAAATTGCAAGAACTCCTGTGTAGATCTGAGTGCAAGCTTCTATACACAGTTAAGATAACTGGTGCCACAACAGATCATTCTTGGAAAGTAGATACGTTGGCTAAAATGTCACCATTTTGTAAGGTGGTATTTCTTGGCATGATTGAGGATGTCTACAGGCTGCATCGGTCCGGTTTATGTCTGAATGGAAAGTTCTCCTTGAAAGATTTTTGTTGGACTTTGAGTCAAAAGGTGAAGTTTAGTGCTGAACTGAAGAGGTCTGTGTTACGGAGGAAACTTAAAAGAATGAGACTGGATTACCAAAAACTTTGCGAAATCATGATAGAAGTGCTGGAGGAGTGTAAAGTTAAAATCCCCGCAGATTTGGAATATTTGTTGGACCTTATGAGAGATGACCCAGTGAAACATCAGTTCTTGATAAGATATAATTTCTGTCTCATGGATGACATCTTGAAAAGAGAGGAGACTTTAACCATGTTCACTCAATATGAGCAGCTCAATAGAGAGGACAGAGAAAAGCACGGAAAGACAACCAGAGAGTATAGAACAGAGATTGCTGTTAGCTTTATCACCCTCCCTCGTAACATAGGGAGTGCAATGCTTGCTAACAAGTTTGTCGCAAAGATCTTTGAAAGATGGAGAGTCGAAACCGGATTTTATAGTTTGGATACAAGAAGAAAGTTAATTGAACTCATAAGGCATTGCATGGTTCACCTTCCAGAGAAGGCATTTGATGAAGAAAAAAGGACACATTACACAGATGCTAACGTTGTTGATATGGTTCAAGTGGGTGCTCCACAGGTTTTCTGTCAGTTCCAGAGAGGCATGAGTGAAATTAAGGAGCTTAGCTATCCACATTTGGTTCGAGTTATGAAGAGTTGA
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| Protein seq | MPPRHDLGKRDLTTEAEEPKGAMDAAAASSSTPASSPRPAESSGGVEMMTTHGTTLSGAPQVGVPTAMDCASATSASSSAAAEHGADGDKLSSPHDKMASDIINKSSCSKFDKEKPDQEVVDQQSGSLLIYPGYKTNECSQNSFGKICEEEIRTVCHEKVEESLRNDPLPLLVRADSDSRPTFQESCSSDRPREKQPTKSDEDIDLYFYRIRLKEVLDEKEYLVHELECARQQLDEVRSMNSEILRENRKLKRSLRTRAVERISRNVLEKLGYCHDIFLCPNEVDVEKLQELLCRSECKLLYTVKITGATTDHSWKVDTLAKMSPFCKVVFLGMIEDVYRLHRSGLCLNGKFSLKDFCWTLSQKVKFSAELKRSVLRRKLKRMRLDYQKLCEIMIEVLEECKVKIPADLEYLLDLMRDDPVKHQFLIRYNFCLMDDILKREETLTMFTQYEQLNREDREKHGKTTREYRTEIAVSFITLPRNIGSAMLANKFVAKIFERWRVETGFYSLDTRRKLIELIRHCMVHLPEKAFDEEKRTHYTDANVVDMVQVGAPQVFCQFQRGMSEIKELSYPHLVRVMKS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0100400 | OsMH63_07T0100400.1 | Chr07 | 5928084 | 5933223 | - | maker | ||
| CDS seq | ATGCCTCCCCGCCACGACCTCGGCAAGCGGGACTTAACTACTGAAGCGGAAGAGCCCAAGGGCGCCATGGACGCCGCGGCGGCTTCCTCCTCCACCCCGGCGTCGTCGCCCCGTCCCGCCGAGTCCTCCGGGGGCGTCGAGATGATGACCACCCACGGCACGACGCTGTCTGGGGCACCGCAGGTGGGGGTGCCCACGGCCATGGACTGCGCCTCCGCGACCTCGGCGTCGTCCTCGGCGGCGGCCGAGCACGGCGCAGATGGTGATAAACTCTCCTCTCCGCACGACAAGATGGCCAGCGACATCATCAACAAGTCCTCGTGCTCCAAGTTTGACAAGGAGAAGCCCGATCAGGAGGTGGTGGACCAGCAATCAGGATCTCTGCTCATCTATCCTGGCTACAAAACAAATGAGTGTTCCCAGAACAGCTTTGGAAAGATATGTGAAGAGGAAATCCGTACTGTGTGCCATGAAAAAGTAGAAGAAAGCTTGAGAAATGATCCCCTGCCCCTATTAGTCCGAGCTGACTCTGATTCAAGACCAACATTCCAAGAAAGTTGTTCTTCTGATAGGCCACGTGAAAAACAGCCAACCAAATCAGATGAGGATATCGACCTGTATTTTTATAGGATTCGCTTGAAAGAGGTTCTAGACGAGAAAGAATACCTTGTCCACGAGTTGGAATGTGCTAGACAGCAGCTGGATGAGGTCAGGTCAATGAATAGTGAAATTCTGAGAGAAAACAGGAAATTGAAAAGGTCGCTCCGTACTAGAGCTGTTGAAAGAATTTCAAGGAACGTTCTAGAGAAGCTTGGATACTGTCATGACATCTTTTTATGCCCTAATGAGGTTGATGTTGAGAAATTGCAAGAACTCCTGTGTAGATCTGAGTGCAAGCTTCTATACACAGTTAAGATAACTGGTGCCACAACAGATCATTCTTGGAAAGTAGATACGTTGGCTAAAATGTCACCATTTTGTAAGGTGGTATTTCTTGGCATGATTGAGGATGTCTACAGGCTGCATCGGTCCGGTTTATGTCTGAATGGAAAGTTCTCCTTGAAAGATTTTTGTTGGACTTTGAGTCAAAAGGTGAAGTTTAGTGCTGAACTGAAGAGGTCTGTGTTACGGAGGAAACTTAAAAGAATGAGACTGGATTACCAAAAACTTTGCGAAATCATGATAGAAGTGCTGGAGGAGTGTAAAGTTAAAATCCCCGCAGATTTGGAATATTTGTTGGACCTTATGAGAGATGACCCAGTGAAACATCAGTTCTTGATAAGATATAATTTCTGTCTCATGGATGACATCTTGAAAAGAGAGGAGACTTTAACCATGTTCACTCAATATGAGCAGCTCAATAGAGAGGACAGAGAAAAGCACGGAAAGACAACCAGAGAGTATAGAACAGAGATTGCTGTTAGCTTTATCACCCTCCCTCGTAACATAGGGAGTGCAATGCTTGCTAACAAGTTTGTCGCAAAGATCTTTGAAAGATGGAGAGTCGAAACCGGATTTTATAGTTTGGATACAAGAAGAAAGTTAATTGAACTCATAAGGCATTGCATGGTTCACCTTCCAGAGAAGGCATTTGATGAAGAAAAAAGGACACATTACACAGATGCTAACGTTGTTGATATGGTTCAAGTGGGTGCTCCACAGGTTTTCTGTCAGTTCCAGAGAGGCATGAGTGAAATTAAGGAGCTTAGCTATCCACATTTGGTTCGAGTTATGAAGAGTTGA
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| Protein seq | MPPRHDLGKRDLTTEAEEPKGAMDAAAASSSTPASSPRPAESSGGVEMMTTHGTTLSGAPQVGVPTAMDCASATSASSSAAAEHGADGDKLSSPHDKMASDIINKSSCSKFDKEKPDQEVVDQQSGSLLIYPGYKTNECSQNSFGKICEEEIRTVCHEKVEESLRNDPLPLLVRADSDSRPTFQESCSSDRPREKQPTKSDEDIDLYFYRIRLKEVLDEKEYLVHELECARQQLDEVRSMNSEILRENRKLKRSLRTRAVERISRNVLEKLGYCHDIFLCPNEVDVEKLQELLCRSECKLLYTVKITGATTDHSWKVDTLAKMSPFCKVVFLGMIEDVYRLHRSGLCLNGKFSLKDFCWTLSQKVKFSAELKRSVLRRKLKRMRLDYQKLCEIMIEVLEECKVKIPADLEYLLDLMRDDPVKHQFLIRYNFCLMDDILKREETLTMFTQYEQLNREDREKHGKTTREYRTEIAVSFITLPRNIGSAMLANKFVAKIFERWRVETGFYSLDTRRKLIELIRHCMVHLPEKAFDEEKRTHYTDANVVDMVQVGAPQVFCQFQRGMSEIKELSYPHLVRVMKS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0058205 | 0 | 0.0722795 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0191700 | SBH | 2.300088 | 2.144165 | 5.392417 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g10850 | RBH | 0.0 | 0.022622 | 0.027923 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0191700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0005940 | SBH | 1.144644 | 7.960276 | 10.714240 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0005900 | SBH | 0.110877 | 2.622082 | 3.457809 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0005810 | SBH | 1.094877 | 5.092666 | 13.745809 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0005730 | SBH | 0.279705 | 0.211985 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0005890 | SBH | 5.172956 | 11.987675 | 22.695660 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0006400 | SBH | 0.333446 | 0.615959 | 1.764449 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0102100 | RBH | 6.785925 | 6.695844 | 9.94561 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0005830 | SBH | 0.306175 | 0.094328 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0005830 | SBH | 0.235840 | 7.809484 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0005870 | SBH | 2.486528 | 9.771506 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0006000 | SBH | 0.620175 | 0.825171 | 1.488583 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0005840 | SBH | 0.331826 | 3.880472 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G006020 | SBH | 0.612061 | 4.155777 | 2.817114 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0005820 | SBH | 2.970361 | 11.103792 | 14.648224 |
