Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0474400 | OGI:06084420 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:30950369-30954982 | ||||||||
| Gene Symbol | GAUT3, OsGAUT3 | ||||||||||
| DNA seq | GGCTGGCAGGCACACTCGCAGTCCCCACTCCAAAAGCCGGAGGAGGAGGAGGCGATTCACCGACATCCCGGAGCGGATCGCGGAGCGCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGGTCCGTCGATTTCAGCCCTGGCCGTGCTTGATTTCCGCCGATTGTGTGGGCAATCTCGTTTTAATCTCGTGCGTGTTTTTTTACTTACGATTTTGTTTTCGTTTTGGGGCCAGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGGTGAGGAGTTTCGTTTTTTTCTTTCTTTCCAGCGTTTGTTTCTCTAGATGAGATGCTCAGATTAACACCTACAGTGATGCTGCTGCACTTTTATCTTGCTCCTTGTGGAATGTGGAAATTTTTGGCTTTCGATTGTCAGGCTAGGGTGAATTCGCGTTTTATGTGCATGTGTTGATCTGTCCGCAGCTCAGCTACTCTAATTTTTAACAGCTGCCAAATGCGACCGTATATTGAGAATATCTTGAAATTTAAGTGGAGACTGGAGAGCGGAAAATTTTTGTCATGCAATATCTGTTGATAGACATAATGTGATTACCATTCTCTCTGTCATGCATGGGAAACACTTGGTATTAATTGTATTTTTACTCGGTATCTTGTGTATAAAGTGATACAGTACATATTGAACTAGCTGTAGTAGTTTACACTTCACACGCAACATTTTAGATATACGTTACTGTGCTCTGGAAGTGACGGTTGATGACATTTGCACAATGGCTAGGAAGAGCCATTTGTGTCCATCAACATGGCTGTGTCATAAGTAAGCCTTTATAAATTGGGTATCCAAATGGTGCCTACATTGTTGTTTCACCAGGTGGATTGCATTTTACCCAGCCATCCGGCATTGCCTAGATAATTTAGTGAAAGCACCTACTGAATATTTGGCCTTACCAATTGATTATATGGGTCTACTAGACCTTTTTCTAGAACAGCATGCTCTGACAAGTTTTAGGGTCCATACCCGTCAGGCCATCACTGTTTCCAACGAGAACATGATATTTATAGGGAAAATAACTACTGGTGTCATCTTCGTAATGCCTAGGAACATTTTGCTGGAATTTCAGGCATATAATTTTATCCTAGACATAAGTGTTTGTTATACTCCACGCAATTTATAGTCTTCATGTTGCATCCCAGTGACATATGCTGACAAAGTTCAGGGTTTATATATATGCTCGCGTTTTCTTGTGTTCAGAGTTAAAGTTAATCAGTTTACTCAAACATATAGGATTCGTGTATGACCTGACCACATTACCTTATCATTACATTTTTTCTGTACGGCATTGCTTGCCATTTAGTTTTGGAAGCAATCAATTCTCTCAGTTTTTGAATATTGCTCTCACCTGTTAAGAAGATAACGTCCCTTCATCATTCTATTAAGTTCTCTGTTTAAAGTTTAACTTACTTTGGGGTTGGACTTGGAAGTGATTGATAAATAAACTTTACCCCTTCTGTTCACAATTTATACGCTTGTGTTAGCTTGTTAGGAACAATTTTCTCATGAAATGTTTCCTCATTATACCTAAGCCATCCAATCACCTTCTGGACACTCGTGATGGTTTTAGAGCATATCCCATCAAGTCATTCTAATAAGTGTTCCTGCTTTGTGCAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTTTGAAGACTTATCCTTCATTTCTACATCTTTAATTGGTGTTATTGAAGCATGTTTTCTTACTGCCACAATTTTGTGATACTAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACCGAAGAAGGTGATAATTAGTAAACAATGACAGATCTATAATTCTATATGATTGCATCTACTAAGATCAATCCATTCAATGTGGGTGCTTTATTTCTCAATGCAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGGTAACTTTCTTCTACTTAAAGCCCTTGCAAATTAACTAGGGATATTCTAGCTTTTCTTGTATTACAATTCCGAACAGAAGTGTCCATCCTTTTTATGCCATTTCTTTTAGCATTACTACTTGTTTCCAAATGAGACCTTATGTTTCTTAAGCATTTTTTTATATTTCCTTACTACAGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGGTAATTTCTGTTTAAACTCTTCTTTAGGTCTTTTTTTTTCCTTTTTTTGCACTACTAATTTTTCTTACTTATTTGAAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGCGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGTAAGTGCAATCTAGAGTTCAATTTGGAATTGCAATTTCTTGGCAATGACTGAGAAACATGTATTCGGTAAAAACTGCTCATTTTTCTACCATGCAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCACAAGTGTATCCTAAGTTGAATAAGATCCTTTTCTTGGATGATGACATAGTTGTTCAGAAGGATTTGACAGGACTCTGGGAGGTTGATCTAAATGGGAATGTAAATGGTGCTGTGGAAACATGTGGGGAGAGTTTTCACCGTTTTGACAAGTACCTCAATTTTTCAAATCCAAATATTGCTCAGAACTTCGATCCTAATGCTTGTGGCTGGGCGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGGTAAGTTGAAATAAGGTTTATATTACTGTTTCCATTTTTCTGTAGAAATTTCAATGGCAAATTTCTTTCGCTATAACATGCAATATTTCAGTTTCTGCAATTCCTATTATTTTCACTAGCAAATGTAGTATATGCAGTTCTGCACTAACAACAGTTCATGCACCCTCTTAGCTTCTAAAACTAGTAAAAGCATAATATGCACTTTGTGAGATGCACATTCTATATCACAAACAGTAGCATACAGTACTAAACAAATTCCACTACTGTGCTTCACACTTTGTTCTTTTTACAGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTATTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGTTTGTGTGGCTAA
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| CDS seq | ATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACCGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGCGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCACAAGTGTATCCTAAGTTGAATAAGATCCTTTTCTTGGATGATGACATAGTTGTTCAGAAGGATTTGACAGGACTCTGGGAGGTTGATCTAAATGGGAATGTAAATGGTGCTGTGGAAACATGTGGGGAGAGTTTTCACCGTTTTGACAAGTACCTCAATTTTTCAAATCCAAATATTGCTCAGAACTTCGATCCTAATGCTTGTGGCTGGGCGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAG
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| Protein seq | MAGARAMAFVALCALAAFPVAVTGAQVDPLYSSKQVLDWSSQANIKLQNFSLTEEDGLQLLVRPEEVTHRKLRERTRIKKKIEPVQQDDEALVKLENAGIERSKAVDSAVLGKYSIWRRENENEKADSKVRLMRDQMIMARIYSVLAKSRDKLDLHQDLLSRLKESQRSLGEATADAELPKSASERVKVMGQLLAKARDQLYDCKAITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLSPEKRKFPKSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLESVAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSNPNIAQNFDPNACGWAYGMNMFDLEEWKKKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIERSEIDNAAVIHYNGNMKPWLEIAMSKYRPYWTKYINYEHTYVRGCKISQ |
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| Function | Polygalacturonate 4-alpha-galacturonosyltransferase [UniProtKB/Swiss-Prot:Q9LE59] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0474400 | OsMH63_06T0474400.1 | Chr06 | 30950369 | 30954982 | + | maker | ||
| CDS seq | ATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACCGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGCGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCACAAGTGTATCCTAAGTTGAATAAGATCCTTTTCTTGGATGATGACATAGTTGTTCAGAAGGATTTGACAGGACTCTGGGAGGTTGATCTAAATGGGAATGTAAATGGTGCTGTGGAAACATGTGGGGAGAGTTTTCACCGTTTTGACAAGTACCTCAATTTTTCAAATCCAAATATTGCTCAGAACTTCGATCCTAATGCTTGTGGCTGGGCGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAG
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| Protein seq | MAGARAMAFVALCALAAFPVAVTGAQVDPLYSSKQVLDWSSQANIKLQNFSLTEEDGLQLLVRPEEVTHRKLRERTRIKKKIEPVQQDDEALVKLENAGIERSKAVDSAVLGKYSIWRRENENEKADSKVRLMRDQMIMARIYSVLAKSRDKLDLHQDLLSRLKESQRSLGEATADAELPKSASERVKVMGQLLAKARDQLYDCKAITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLSPEKRKFPKSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLESVAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSNPNIAQNFDPNACGWAYGMNMFDLEEWKKKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIERSEIDNAAVIHYNGNMKPWLEIAMSKYRPYWTKYINYEHTYVRGCKISQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.1566125 | 8.993895 | 9.423621 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0712500 | RBH | 0.250327 | 0.110884 | 8.420487 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g49810 | RBH | 0.239434 | 0.332045 | 2.184932 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0712500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0028870 | RBH | 0.089316 | 14.759771 | 6.115102 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0028720 | RBH | 0.000000 | 6.813317 | 3.877709 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0028860 | RBH | 0.201795 | 14.686831 | 13.972036 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0028420 | RBH | 0.034220 | 0.713141 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0028920 | RBH | 1.984333 | 34.346176 | 15.851887 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0348900 | RBH | 7.897413 | 19.588269 | 27.861184 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0028280 | RBH | 0.088397 | 1.578826 | 1.721287 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0457900 | RBH | 6.8006145 | 3.1491475 | 24.3295995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0028820 | RBH | 0.0 | 0.408526 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0028890 | RBH | 0.000000 | 19.342207 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0028470 | RBH | 0.0 | 21.085112 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0029120 | RBH | 0.203687 | 0.901247 | 1.488720 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0028750 | RBH | 0.056654 | 9.374920 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G028610 | RBH | 0.225373 | 9.954498 | 3.610589 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0028730 | RBH | 0.0 | 25.736050 | 8.422797 |
