Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_06G0427100 OGI:06076770 | 9/16 Minghui 63 | MH63RS3 | HZAU Chr06:28128049-28130021
Gene Symbol -
DNA seq

GCAACCTACAACGGCAGCGTTGCAGGAAACCCATTTGATCCCAACGATCCATTTGCAATGTCTAATAACTTCGCGCCACCGTCGAATGTTCAGTTAGCCATGATGCAACAGCAGCATCAGTATTATCAGGAGCAGCAGCAGCAGTATTATCAGATTCAGCAACAGCAGCAAATGGTGACGTTGCCGCCGCAAACATACCATCAGCAGCAGCAGACACAGTATTCTGCTCTTCCTTCTCATGATGGATTATCCAATCCATTTGGTGATCCATTCGGTGGCCTTGTTGCGATGGCTAATCCTCCAAAGCAAAACAATTCAAATTTAGTCTGAATTCGCACATTCTTTTCTGTATCACCCTCCGATTTTTGATCGTATCTCCTTTTCCAATTTTGAGGAGCAACTTGTATAGTCCGACGATTTTCAATACTGCATCCTGACGATGCAATGTAATACTCACATTTGGAAACTGATATGATCATTCAAATGTCGATGTACCAAAATCACATGTTATGCTCCACTCTTCATTTCACCAACCAACTCAGATAATACCAAGAAAAGGGTGGTAATTATTAATCTCTTTATAGTTTGTTTGATGAGTCTTACATATTATAACCAGATGAGCTACATGGATTCCTGCGTTTTTATTCCCTCACAGTAGCTCATGAATTTCTGGATTCTACATTTGTACAACAGCAGAAAACAAATACTAGCACATGAAACAGGCAAAGCTTGAATTCGTCTTCGGCTGATTTGGCTTCCACTAATGCATCTTCAGCTGGAATTTCGCTCATTCATCTTCAGCTGGAATGACATCCGAGCGCTCCACTTCATCCGGAAAGTGTCCTGCATGATCATTAAATAAGCTAAAAATGAGCAACGGTGCAAAATTAAGTGCAAGAACAGTAGGGTAGATACTAAATAGGCAAGCCAAATTATACTGGAATTGCAGAAGAGATAAGGAAAACAATGAAATACACAAATTTGTTCTGCTCAGTTCTTGTGCGTGTTTGTTGAAGCATTTCATGATTAGGAATTGCAGGATGGATAAGGAAAACAATGAGTAGTCACAAATTTGTTCCGAATTCGAGCAGTTCTTGTGCGAGTTTGTTCAAGCGTTTCATGATTAGGAATTGCCGAAGGGATAAGGAAACAATGAATGAATAGACAATAGTCACAAATTTGCTCTGAATTCGAGTAGTTCTTGCGCGAGTTTGTTGAAAAATTTCATGATTAGGCAGCATGAGCAATATGGGGGAAATCGAGATCCCTGAATGGTTAGATTCTGAAGAACTCTTACCATCGATGAAGTAGGTCGTGCAGGGGAATCCGCGGGAGGCGGCGTCGACGGCGCGCGCCTCGTCGGCGGAAAGCGCGCGGGGCACCGGCCCCATCCTCGCGGCGGCGTGGCTGACGAGCGCCAGCAACCCGCGGGCGGCGCCGGCGGGCCGCGGCGGCGCGTAGTACGACGTCCCGGGCCGGAACGGCGCCCACTCGGGCTCCGACATCCGCGCCATGGCGCCGTCGATGGCCTCCTCCATCCGCCGCGCCATCGCGCTCGACGACGACCCGGCTTCCTCCGACGTCGACGCGCCCCCCGCCGCGGAGGCGGCGCCGCCGCCCTCGACCACCTCCGCCGCCGTGAGCGGCAGCCGGCGCCGGGTGTGGTAGCCGCACCGGGCGGCGGCGAGGATCCCGATCCCGCCGCGTCGCGCCAGGAACCCAGCCCGGGAGAGCGCGCGCGACGACGCCGACATGGACACGCGACGCGGCGGTGGCCGGAGAGCTCGCAAACCGGTGGCGCTCGCCGCGGACGCGTGGTGGTGTCGCGAAGGTTTGAGAGGAGGAGAGTGGGAGGGAGCCGATGGTAAATATAGCAGTAATCCGAGGGCTTTTCCGCAAATTACACGGTATCCGGTTCGGATTTCGGAAAACTGCAGGCTGCCTCCGCCGGTTTTGCCCCAAGTCGGCTTAGG

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CDS seq

ATGTCGGCGTCGTCGCGCGCGCTCTCCCGGGCTGGGTTCCTGGCGCGACGCGGCGGGATCGGGATCCTCGCCGCCGCCCGGTGCGGCTACCACACCCGGCGCCGGCTGCCGCTCACGGCGGCGGAGGTGGTCGAGGGCGGCGGCGCCGCCTCCGCGGCGGGGGGCGCGTCGACGTCGGAGGAAGCCGGGTCGTCGTCGAGCGCGATGGCGCGGCGGATGGAGGAGGCCATCGACGGCGCCATGGCGCGGATGTCGGAGCCCGAGTGGGCGCCGTTCCGGCCCGGGACGTCGTACTACGCGCCGCCGCGGCCCGCCGGCGCCGCCCGCGGGTTGCTGGCGCTCGTCAGCCACGCCGCCGCGAGGATGGGGCCGGTGCCCCGCGCGCTTTCCGCCGACGAGGCGCGCGCCGTCGACGCCGCCTCCCGCGGATTCCCCTGCACGACCTACTTCATCGATGGACACTTTCCGGATGAAGTGGAGCGCTCGGATGTCATTCCAGCTGAAGATGAATGA

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Protein seq

MSASSRALSRAGFLARRGGIGILAAARCGYHTRRRLPLTAAEVVEGGGAASAAGGASTSEEAGSSSSAMARRMEEAIDGAMARMSEPEWAPFRPGTSYYAPPRPAGAARGLLALVSHAAARMGPVPRALSADEARAVDAASRGFPCTTYFIDGHFPDEVERSDVIPAEDE

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_06G0427100 OsMH63_06T0427100.1 Chr06 28128049 28130021 - maker
CDS seq

ATGTCGGCGTCGTCGCGCGCGCTCTCCCGGGCTGGGTTCCTGGCGCGACGCGGCGGGATCGGGATCCTCGCCGCCGCCCGGTGCGGCTACCACACCCGGCGCCGGCTGCCGCTCACGGCGGCGGAGGTGGTCGAGGGCGGCGGCGCCGCCTCCGCGGCGGGGGGCGCGTCGACGTCGGAGGAAGCCGGGTCGTCGTCGAGCGCGATGGCGCGGCGGATGGAGGAGGCCATCGACGGCGCCATGGCGCGGATGTCGGAGCCCGAGTGGGCGCCGTTCCGGCCCGGGACGTCGTACTACGCGCCGCCGCGGCCCGCCGGCGCCGCCCGCGGGTTGCTGGCGCTCGTCAGCCACGCCGCCGCGAGGATGGGGCCGGTGCCCCGCGCGCTTTCCGCCGACGAGGCGCGCGCCGTCGACGCCGCCTCCCGCGGATTCCCCTGCACGACCTACTTCATCGATGGACACTTTCCGGATGAAGTGGAGCGCTCGGATGTCATTCCAGCTGAAGATGAATGA

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Protein seq

MSASSRALSRAGFLARRGGIGILAAARCGYHTRRRLPLTAAEVVEGGGAASAAGGASTSEEAGSSSSAMARRMEEAIDGAMARMSEPEWAPFRPGTSYYAPPRPAGAARGLLALVSHAAARMGPVPRALSADEARAVDAASRGFPCTTYFIDGHFPDEVERSDVIPAEDE

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 3.205165 17.133915 40.3882445

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0661500 RBH 0.461987 1.809944 2.478187
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g45060 RBH 0.325642 1.192905 0.625130
Nipponbare | IRGSP 1.0 | RAP-db Os06g0661500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0024760 RBH 0.058640 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0410100 RBH 5.5013595 33.684105 13.8166695
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_Ung0008000 RBH 0.0 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0025150 RBH 0.000000 27.778145 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0025390 RBH 0.0 0.000000 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G024890 RBH 0.000000 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0025000 RBH 1.213461 9.516812 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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