Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0347500 | OGI:06061490 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:22710156-22710533 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGGGGAGAAGCCACCCCGGTGGCGAGTAGTCCGACGGGCTTTGCTCCGGCAAGAAGCTGTCCACACGCGGAACCGCCGCCGCCGCCGCCGGTAGCCACTTGCCGGTGTCTCTGCAGGGATATCGCCGTCGCCGAGCCGTGAACACTGCCGACTCGCGGTAGAGCCTCCCGTCATCCAGGAAGTAGACGCCCTCGCCGAACTCATCGCCCGGATAGTCGCCCGCGTCATACGATCTGGAGCAGCCTCGCGCGACGAACAGCATCCGCCCACCCAGCGATTCCAGCTCCTTCCATGCGTACAGGGCCTCGATGCGCGTGCCCGACAGCGGCTCCACCATCTCGAACACCTTGAACGCGGACGTCCTCGGCGGCGCCAT |
||||||||||
| CDS seq | ATGGCGCCGCCGAGGACGTCCGCGTTCAAGGTGTTCGAGATGGTGGAGCCGCTGTCGGGCACGCGCATCGAGGCCCTGTACGCATGGAAGGAGCTGGAATCGCTGGGTGGGCGGATGCTGTTCGTCGCGCGAGGCTGCTCCAGATCGTATGACGCGGGCGACTATCCGGGCGATGAGTTCGGCGAGGGCGTCTACTTCCTGGATGACGGGAGGCTCTACCGCGAGTCGGCAGTGTTCACGGCTCGGCGACGGCGATATCCCTGCAGAGACACCGGCAAGTGGCTACCGGCGGCGGCGGCGGCGGTTCCGCGTGTGGACAGCTTCTTGCCGGAGCAAAGCCCGTCGGACTACTCGCCACCGGGGTGGCTTCTCCCCTGA |
||||||||||
| Protein seq | MAPPRTSAFKVFEMVEPLSGTRIEALYAWKELESLGGRMLFVARGCSRSYDAGDYPGDEFGEGVYFLDDGRLYRESAVFTARRRRYPCRDTGKWLPAAAAAVPRVDSFLPEQSPSDYSPPGWLLP |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0347500 | OsMH63_06T0347500.1 | Chr06 | 22710156 | 22710533 | - | maker | ||
| CDS seq | ATGGCGCCGCCGAGGACGTCCGCGTTCAAGGTGTTCGAGATGGTGGAGCCGCTGTCGGGCACGCGCATCGAGGCCCTGTACGCATGGAAGGAGCTGGAATCGCTGGGTGGGCGGATGCTGTTCGTCGCGCGAGGCTGCTCCAGATCGTATGACGCGGGCGACTATCCGGGCGATGAGTTCGGCGAGGGCGTCTACTTCCTGGATGACGGGAGGCTCTACCGCGAGTCGGCAGTGTTCACGGCTCGGCGACGGCGATATCCCTGCAGAGACACCGGCAAGTGGCTACCGGCGGCGGCGGCGGCGGTTCCGCGTGTGGACAGCTTCTTGCCGGAGCAAAGCCCGTCGGACTACTCGCCACCGGGGTGGCTTCTCCCCTGA
More
|
|||||||
| Protein seq | MAPPRTSAFKVFEMVEPLSGTRIEALYAWKELESLGGRMLFVARGCSRSYDAGDYPGDEFGEGVYFLDDGRLYRESAVFTARRRRYPCRDTGKWLPAAAAAVPRVDSFLPEQSPSDYSPPGWLLP |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.078704 | 0.332548 | 0.337703 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g40550 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0021300 | SBH | 0.000000 | 0.0 | 0.104724 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0021270 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0020040 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0021210 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0020240 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0368900 | RBH | 0 | 0.0129825 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0020850 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0321800 | SBH | 7.9898025 | 6.780112 | 6.625054 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0021160 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0021070 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0021190 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0021250 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0021220 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G020690 | SBH | 0.0 | 0.0 | 0.148752 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0021110 | SBH | 0.0 | 0.0 | 0.0 |
