Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0148700 | OGI:06025160 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:8809009-8809419 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTACAGGACAACTGGAGCACCGCCACTACGCTGCCATGGCCGCCAATGCCCCAGCCGCTGCATTGATGACTCCAGGACCACCTCGCCAAAGTCCCCACCGCCGCCACCACATCGCCGGCTCCGACGACTCCATGACCACCACGACACCCCGGCCACCACCACCTTGCTCCACGACCACCTCGTCACTGCAGCCGCCAAAGCCCCCCCCCCCCCCCCCCCCCCCCCCGCTGCCACCACATCGCCAGCTCTTAACGACTCCACGACCACCTCAACACTGCGGCCGCCACCACCTCGCCGCCACGGCCGCTCACGCACTAGCCGCCGCCGCGGCCAACACCACCTCACCGCCACGGCCGCCGCCACCTCGCCGCCACAGTTGCCCATGGACAAGCCACTGCTGTTACCACTCAT
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| CDS seq | ATGAGTGGTAACAGCAGTGGCTTGTCCATGGGCAACTGTGGCGGCGAGGTGGCGGCGGCCGTGGCGGTGAGGTGGTGTTGGCCGCGGCGGCGGCTAGTGCGTGAGCGGCCGTGGCGGCGAGGTGGTGGCGGCCGCAGTGTTGAGGTGGTCGTGGAGTCGTTAAGAGCTGGCGATGTGGTGGCAGCGGGGGGGGGGGGGGGGGGGGGGGGGGCTTTGGCGGCTGCAGTGACGAGGTGGTCGTGGAGCAAGGTGGTGGTGGCCGGGGTGTCGTGGTGGTCATGGAGTCGTCGGAGCCGGCGATGTGGTGGCGGCGGTGGGGACTTTGGCGAGGTGGTCCTGGAGTCATCAATGCAGCGGCTGGGGCATTGGCGGCCATGGCAGCGTAGTGGCGGTGCTCCAGTTGTCCTGTAA
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| Protein seq | MSGNSSGLSMGNCGGEVAAAVAVRWCWPRRRLVRERPWRRGGGGRSVEVVVESLRAGDVVAAGGGGGGGGALAAAVTRWSWSKVVVAGVSWWSWSRRSRRCGGGGGDFGEVVLESSMQRLGHWRPWQRSGGAPVVL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0148700 | OsMH63_06T0148700-mRNA-1 | Chr06 | 8809009 | 8809419 | - | maker | ||
| CDS seq | ATGAGTGGTAACAGCAGTGGCTTGTCCATGGGCAACTGTGGCGGCGAGGTGGCGGCGGCCGTGGCGGTGAGGTGGTGTTGGCCGCGGCGGCGGCTAGTGCGTGAGCGGCCGTGGCGGCGAGGTGGTGGCGGCCGCAGTGTTGAGGTGGTCGTGGAGTCGTTAAGAGCTGGCGATGTGGTGGCAGCGGGGGGGGGGGGGGGGGGGGGGGGGGCTTTGGCGGCTGCAGTGACGAGGTGGTCGTGGAGCAAGGTGGTGGTGGCCGGGGTGTCGTGGTGGTCATGGAGTCGTCGGAGCCGGCGATGTGGTGGCGGCGGTGGGGACTTTGGCGAGGTGGTCCTGGAGTCATCAATGCAGCGGCTGGGGCATTGGCGGCCATGGCAGCGTAGTGGCGGTGCTCCAGTTGTCCTGTAA
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| Protein seq | MSGNSSGLSMGNCGGEVAAAVAVRWCWPRRRLVRERPWRRGGGGRSVEVVVESLRAGDVVAAGGGGGGGGALAAAVTRWSWSKVVVAGVSWWSWSRRSRRCGGGGGDFGEVVLESSMQRLGHWRPWQRSGGAPVVL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.062042 | 0.208808 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0010780 | RBH | 0.183498 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0010770 | RBH | 5.995084 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0010800 | RBH | 0.149322 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0010490 | RBH | 0.235575 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0145500 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0010760 | SBH | 0.311321 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G010560 | RBH | 0.623957 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0010850 | RBH | 0.0 | 0.0 | 0.0 |
