Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0088800 | OGI:06015120 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:5059619-5060422 | ||||||||
| Gene Symbol | DLN156, R2R3-MYB, OsDLN156 | ||||||||||
| DNA seq | ATGGTGTGGGTCCCATATTTCTCTATTTTTTTTCTTTTTCTCTTCTCTTCTCTCCGAAATCTCTCGAGTCTCGAGCAGGCGTGGCGACCGAGGGGGAGAGAGGTGGCCGACGGCGGAGCGGGGACGGCGGCGACGTGAGAGGGAGAGAGAGGCGGTCGACGCGACGGCGGCAGCGGGAAAGGAGGAGAGCTGGCGGCTGGCGCGACGGCGAGCTCGGCGTCGGAGATGTTCGAACGTGCCGGGTGCTCGACCTCGGGCCCCGCCGCCGCCCGCCGGGCGAGCGGCGCGCTCTCCCCATCGACCCTCTCTCCCTCCCCAAGGCGATGGGGCTGCTCCGCTGCCGAAAGAGCTGCTGCCTCCATTGGATGAACTACCTCAGCCCCGACCTCAAGTGCAGCAACTTCACCGACAACGACGACGACGAGCTCACCATCAAGCTCCACACCCTTCTCGGCAACAAGTAAGCAAAACAAATTTCAACGTGTTGTCATCTGCTCCGGTTAGCTCTTCTTGTGTTCATGGTGCTGATTGATTGGTTCTGCAGGTGGAACACGCACATCAAGCGCAAGCCCATGAGCCAGGGCATCGATCCGCAGACGCATTAGCCGGTTAGCGCTGGGACCAGCGTTGCCGCGGCAAGCGAGCTGACCACGACGGCCAGCACTGTCGGCTTCCCATCCCTGCAGGCGCCGGCGCCGGCGTGAGGGAGCTCGAGGAGGAAGGAGGGAAGGCTGGGAGGGGTCTTCCTCGTAGTCGTCGTTGGCGGCGGAGGTGTCTCCGGCGGAGGCCGAGTCAGCGGCGGAG
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| CDS seq | ATGGTGTGGTCTCGAGCAGGCGTGGCGACCGAGGGGGAGAGAGGTGGCCGACGGCGGAGCGGGGACGGCGGCGACGTGAGAGGGAGAGAGAGGCGGTCGACGCGACGGCGGCAGCGGGAAAGGAGGAGAGCTGGCGGCTGGCGCGACGGCGAGCTCGGCGTCGGAGATGTTCGAACGTGCCGGGTGCTCGACCTCGGGCCCCGCCGCCGCCCGCCGGGCGAGCGGCGCGCTCTCCCCATCGACCCTCTCTCCCTCCCCAAGGCGATGGGGCTGCTCCGCTGCCGAAAGAGCTGCTGCCTCCATTGGATGAACTACCTCAGCCCCGACCTCAAGTGCAGCAACTTCACCGACAACGACGACGACGAGCTCACCATCAAGCTCCACACCCTTCTCGGCAACAAGTGGAACACGCACATCAAGCGCAAGCCCATGAGCCAGGGCATCGATCCGCAGACGCATTAG
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| Protein seq | MVWSRAGVATEGERGGRRRSGDGGDVRGRERRSTRRRQRERRRAGGWRDGELGVGDVRTCRVLDLGPRRRPPGERRALPIDPLSLPKAMGLLRCRKSCCLHWMNYLSPDLKCSNFTDNDDDELTIKLHTLLGNKWNTHIKRKPMSQGIDPQTH |
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| Function | Transcription repressor MYB6 [UniProtKB/Swiss-Prot:Q38851] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0088800 | OsMH63_06T0088800.1 | Chr06 | 5059619 | 5060422 | + | maker | ||
| CDS seq | ATGGTGTGGTCTCGAGCAGGCGTGGCGACCGAGGGGGAGAGAGGTGGCCGACGGCGGAGCGGGGACGGCGGCGACGTGAGAGGGAGAGAGAGGCGGTCGACGCGACGGCGGCAGCGGGAAAGGAGGAGAGCTGGCGGCTGGCGCGACGGCGAGCTCGGCGTCGGAGATGTTCGAACGTGCCGGGTGCTCGACCTCGGGCCCCGCCGCCGCCCGCCGGGCGAGCGGCGCGCTCTCCCCATCGACCCTCTCTCCCTCCCCAAGGCGATGGGGCTGCTCCGCTGCCGAAAGAGCTGCTGCCTCCATTGGATGAACTACCTCAGCCCCGACCTCAAGTGCAGCAACTTCACCGACAACGACGACGACGAGCTCACCATCAAGCTCCACACCCTTCTCGGCAACAAGTGGAACACGCACATCAAGCGCAAGCCCATGAGCCAGGGCATCGATCCGCAGACGCATTAG
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| Protein seq | MVWSRAGVATEGERGGRRRSGDGGDVRGRERRSTRRRQRERRRAGGWRDGELGVGDVRTCRVLDLGPRRRPPGERRALPIDPLSLPKAMGLLRCRKSCCLHWMNYLSPDLKCSNFTDNDDDELTIKLHTLLGNKWNTHIKRKPMSQGIDPQTH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.032118 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0112700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g10330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0112700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0000890 | SBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0000890 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0000860 | SBH | 0.0 | 6.038261 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0010350 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0010450 | SBH | 2.703689 | 0.0 | 8.471450 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0518600 | SBH | 0.105261 | 1.0132215 | 0.02051 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0010000 | SBH | 0.0 | 0.0 | 0.163884 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0088800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0010420 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0010280 | SBH | 0.164030 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0010310 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0010480 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0000810 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G010120 | SBH | 0.0 | 0.0 | 0.744988 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0010420 | SBH | 0.0 | 0.0 | 0.000000 |
