Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0055800 | OGI:06009390 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:3124463-3127904 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACTGAATGTATGTCGCAGTCGTGAGTGAGGGACGGTTGGGATGTGTGTTCGCAATGTTCAAGATTTTTTCTTTCAGTTTTGAGACCGCATCTAGATTGCCAGAAATCCAGGCATGGACTCTGCAGAGGGTGTTGGGGAGGTGCTGGAAGGAATCATTCTCACCAACCACATTCAATCTAATGCCAATGTGGAGGTCCTTCAGATTAGGCATGGAATCATGCATAAACAACACGTTGCAAAGAAAGGCAAACTTGAGACATCGGAAACCATGGTTGCTGATGGTGAGCCATGATCCTTGTGTGTCTGAAAAGGGAAGGGCAAGATATTCGAGAGCTTTCAGGTCTCCAAGCATTTCGAGATCGTCCTGAGTAACATATGCTTTACTGAGCTCTAATTTCTCAAGCTTGGCAGCAAGGCGAATCCAACTTGGAATGGTTGTCGTCTTGAACCCGTTTACAATGCTCAATCTCCGGAGGTTTTTTAGGGAAGGGAACCACGAATCAAACAAGAAGCGTTTTGCAGCTATATCCGAATAAGAATAATAAAGAGACAGATCTAGATATTGAAGGCTATGTCTGTCCAGTGCATTAAGTGAGGAGATGAAAATCTTCTCGTAGCTCTTTTCATGCTCGGCATGGGCCTCATCAGAATCTCTAACATGGTCAGGAATCCAAGATACCGCTAGTACTCTCAGCTTGGTAAGCTCACCTAGCTCCTTCAAAAAGCTTACCGGTTGATTGAAGGGCAAGAGACCTGTTAGCTGCTCCAATGCTTGCATCTTGCTAACACCTTCTGCAGGGAACATGACGTCAGAATTGACAGACAGACGAACCAATTGCTGAAGTAGAACAATGGATGGTGGTAATTCTTTAACTTGAGTATCTAGTATATCTAATGTCTCCAAATGCTGGAGACGCCCAATATTGGCGGGGAGCACACTTACTCCTGTTCCGCTAATGCTCAGATACCTCAAATAGGCTAACTTTTCTATATTAGCAAGATGGTTGTTTGTCAATGATTCGCACCCTTCTAGATCCAGTACTCTTGCAACTTTAAATTCCGATAGAGGATGCAATCCTGTGCAGTCCATAGAACAAGCAAGTGACCGGACATGAGGCTTAATCGACTTCATGCTCGAGGCAAATTTCTCTTGGCAGTAGCTACCCTGGAGAGACATGCGACGAACCTTGCAGCAGTTGCTATGCTGCAAAGGTACAGGACCAGACGGATCCAACAAGGTCATAAAGTTCTCCTCTACTGATTTGGACACTATGAAATTAAGAATGACGTCGTGAACACGGCAGCTCAGCACCTCACCGTAGTGCTCATTCCATGGTTGGATCAAGCTCTGGTTTATCAGCACATTGAAATACCTCAGCCCTGCTTCATATAGATTTTCTCCTGGTCTTGCATTGATAAATCCTTCTGCAATCCATCTGCTTACCAAACGGGTCTTTCCAATTTCACAATCTTCTGGGAATGCACTCAAGTATAACAGGCAACTTCTTAAATCATGTGGAAGGTTGTAATAACTGAGTGCTAACACTGATTGCATGGTCTCAAGATCCTTATTTCCTGGTATTGGAGAACTGATAATTTTTTTTACCTCATTCCAGTGATATAACGATTGACGATCAGCCAAGAAGCTGGATATGGAAATGATTGCTAGGGGTATACCATCACATCTTTCCAGTATCTCTTTAGAAGCTTGTTCAAATTCAGGAGGACATTGCTCTTCACAGTCAAAAATTCTTTTGTAAAACAACCTTTTGGAGTGAGCGCCATCGAGATGTTTCATCGGATAAACAAAACCACCATGAGAAGATGAAGATGACATCGCCACTTCTTTCACACGTGTCGTCAAAATTATTATGCTACCAGGACTAGTTTTGACCAATGCTTCTCCAATGAAGTTCCATGGTTCTGGGTTCCATATATCATCCACTACGACAATATACCTGCCACATGTAATTTTAATTTTATCATGGAAAAGAAAATTAAAGTATAATTGATGTATAGATTTTCAAAGGACCGAAATTATAAATGATACCCTTGCAAAGAACCAGAATTAGATTTTCAAAGCATGCTCACATGTTTGGTTGGGTGTTGATTTACAAAATTCTTGAAATTGGTTTTACCCTTTGTATTACGAGGTAACTATAGCTTACATAACATTAAACAATAGTTTACTCTGGTTCGCAACAAGTATACATCAGGGTTCTGTGTCCCAGAAAAGAAAAACAGTGCTTAGAATTACAACATCAGCATTTGAGCTATCTTTGCCTCACAGCAAAATACTTAGGAAAGCTTGGCCCACTCAGTGCTTAGAACAAAATACATCAAACTGGGGCACTTGTTTTTATCTCATGTTGAAAACAAACCAAATAATTGTTTGTTTTGAGCCTACTATTTTCTGTAACTGAACTAATAAAATGCAAAAGGATTTATTTTTTCTTTGTTTTTGTCCAACTATTTTTGTAACTGAACTAGTAGGTCTTCTTGGCAGTGTTTATTGTCTATTAATCGTAGCACATAATAAAATTAATGCCTCCTTCAGTCTTTAGCTAAGTTCCAAGTTTTGTATAGTTGAAGGATGTTTAGGAAAGTGTTGATGAAAACTTAAGAATATATAATTTTGAGTTCATGCATAGGGCTTGAAGCAAAGTTAAAGATAAAAAAATAGACTATAATCTATATTTTCTATAAAGTTACAACCTACTAAACATCTAAAGCTTAACATGCAAGCACAGTACGCATAGTAGTTATTAGTACACTCTAAAGGTTAAAACGCAAGCATGCAACATTAACCTACTAAGAACCTACTCCCTCCGTTTCAGGTTATAAGACTTTCTAACATTGTCCATATTCATATAGATGTTAATGAATCTAATCACACATATATGTCTAGATTCATTAATATATATATAAATGTGGGCAATGCTAGAAAGTCTTATAATATGAAAAGGAGGAAGTAATATAAAACCCATCATGTATGCATAGCAATTACTCCTACAATTCATTATATTGTAAACCTCAACATACAAGCATACTAACTTATATTTCTCACATTATTTTCACAATATTTAACCAAAAAAAATCTATCCTTAAAAAAGATAAGTTCTACAACATTCAACATAAATCCATCCTTATATTCTGCAGCAAAGCGAGAAAGGTCAGCGGAAAACAAAACGGAACATGAGAGTGCACCTTTTTTGCTTGAGATATTCCCTAAGATTATCCACCAGATTTGCTACATCATCCGACATGTTTGTTGACTTGTTGCCAACTTGATTAGAAATGTTGAGGATAAGCTCCTTTATGTTCGGTTTCTGAGACACCGAAACAAAGGCCTTGCACTCGAATTCCCCTTTGATTTTGTCGTACACTTGTTTGGCCAGAGTGGTCTTGCCCAAGCCCGCACACCCGACGATGGATACCAT
More
|
||||||||||
| CDS seq | ATGGTATCCATCGTCGGGTGTGCGGGCTTGGGCAAGACCACTCTGGCCAAACAAGTGTACGACAAAATCAAAGGGGAATTCGAGTGCAAGGCCTTTGTTTCGGTGTCTCAGAAACCGAACATAAAGGAGCTTATCCTCAACATTTCTAATCAAGTTGGCAACAAGTCAACAAACATGTCGGATGATGTAGCAAATCTGGTGGATAATCTTAGGGAATATCTCAAGCAAAAAAGGTATATTGTCGTAGTGGATGATATATGGAACCCAGAACCATGGAACTTCATTGGAGAAGCATTGGTCAAAACTAGTCCTGGTAGCATAATAATTTTGACGACACGTGTGAAAGAAGTGGCGATGTCATCTTCATCTTCTCATGGTGGTTTTGTTTATCCGATGAAACATCTCGATGGCGCTCACTCCAAAAGGTTGTTTTACAAAAGAATTTTTGACTGTGAAGAGCAATGTCCTCCTGAATTTGAACAAGCTTCTAAAGAGATACTGGAAAGATGTGATGGTATACCCCTAGCAATCATTTCCATATCCAGCTTCTTGGCTGATCGTCAATCGTTATATCACTGGAATGAGGTAAAAAAAATTATCAGTTCTCCAATACCAGGAAATAAGGATCTTGAGACCATGCAATCAGTGTTAGCACTCAGTTATTACAACCTTCCACATGATTTAAGAAGTTGCCTGTTATACTTGAGTGCATTCCCAGAAGATTGTGAAATTGGAAAGACCCGTTTGGTAAGCAGATGGATTGCAGAAGGATTTATCAATGCAAGACCAGGAGAAAATCTATATGAAGCAGGGCTGAGGTATTTCAATGTGCTGATAAACCAGAGCTTGATCCAACCATGGAATGAGCACTACGGTGAGGTGCTGAGCTGCCGTGTTCACGACGTCATTCTTAATTTCATAGTGTCCAAATCAGTAGAGGAGAACTTTATGACCTTGTTGGATCCGTCTGGTCCTGTACCTTTGCAGCATAGCAACTGCTGCAAGGTTCGTCGCATGTCTCTCCAGGGTAGCTACTGCCAAGAGAAATTTGCCTCGAGCATGAAGTCGATTAAGCCTCATGTCCGGTCACTTGCTTGTTCTATGGACTGCACAGGATTGCATCCTCTATCGGAATTTAAAGTTGCAAGAGTACTGGATCTAGAAGGGTGCGAATCATTGACAAACAACCATCTTGCTAATATAGAAAAGTTAGCCTATTTGAGGTATCTGAGCATTAGCGGAACAGGAGTAAGTGTGCTCCCCGCCAATATTGGGCGTCTCCAGCATTTGGAGACATTAGATATACTAGATACTCAAGTTAAAGAATTACCACCATCCATTGTTCTACTTCAGCAATTGGTTCGTCTGTCTGTCAATTCTGACGTCATGTTCCCTGCAGAAGGTGTTAGCAAGATGCAAGCATTGGAGCAGCTAACAGGTCTCTTGCCCTTCAATCAACCGGTAAGCTTTTTGAAGGAGCTAGGTGAGCTTACCAAGCTGAGAGTACTAGCGGTATCTTGGATTCCTGACCATGTTAGAGATTCTGATGAGGCCCATGCCGAGCATGAAAAGAGCTACGAGAAGATTTTCATCTCCTCACTTAATGCACTGGACAGACATAGCCTTCAATATCTAGATCTGTCTCTTTATTATTCTTATTCGGATATAGCTGCAAAACGCTTCTTGTTTGATTCGTGGTTCCCTTCCCTAAAAAACCTCCGGAGATTGAGCATTGTAAACGGGTTCAAGACGACAACCATTCCAAGTTGGATTCGCCTTGCTGCCAAGCTTGAGAAATTAGAGCTCAGTAAAGCATATGTTACTCAGGACGATCTCGAAATGCTTGGAGACCTGAAAGCTCTCGAATATCTTGCCCTTCCCTTTTCAGACACACAAGGATCATGGCTCACCATCAGCAACCATGGTTTCCGATGTCTCAAGTTTGCCTTTCTTTGCAACGTGTTGTTTATGCATGATTCCATGCCTAATCTGAAGGACCTCCACATTGGCATTAGATTGAATGTGGTTGGTGAGAATGATTCCTTCCAGCACCTCCCCAACACCCTCTGCAGAGTCCATGCCTGGATTTCTGGCAATCTAGATGCGGTCTCAAAACTGAAAGAAAAAATCTTGAACATTGCGAACACACATCCCAACCGTCCCTCACTCACGACTGCGACATACATTCAGTAG
More
|
||||||||||
| Protein seq | MVSIVGCAGLGKTTLAKQVYDKIKGEFECKAFVSVSQKPNIKELILNISNQVGNKSTNMSDDVANLVDNLREYLKQKRYIVVVDDIWNPEPWNFIGEALVKTSPGSIIILTTRVKEVAMSSSSSHGGFVYPMKHLDGAHSKRLFYKRIFDCEEQCPPEFEQASKEILERCDGIPLAIISISSFLADRQSLYHWNEVKKIISSPIPGNKDLETMQSVLALSYYNLPHDLRSCLLYLSAFPEDCEIGKTRLVSRWIAEGFINARPGENLYEAGLRYFNVLINQSLIQPWNEHYGEVLSCRVHDVILNFIVSKSVEENFMTLLDPSGPVPLQHSNCCKVRRMSLQGSYCQEKFASSMKSIKPHVRSLACSMDCTGLHPLSEFKVARVLDLEGCESLTNNHLANIEKLAYLRYLSISGTGVSVLPANIGRLQHLETLDILDTQVKELPPSIVLLQQLVRLSVNSDVMFPAEGVSKMQALEQLTGLLPFNQPVSFLKELGELTKLRVLAVSWIPDHVRDSDEAHAEHEKSYEKIFISSLNALDRHSLQYLDLSLYYSYSDIAAKRFLFDSWFPSLKNLRRLSIVNGFKTTTIPSWIRLAAKLEKLELSKAYVTQDDLEMLGDLKALEYLALPFSDTQGSWLTISNHGFRCLKFAFLCNVLFMHDSMPNLKDLHIGIRLNVVGENDSFQHLPNTLCRVHAWISGNLDAVSKLKEKILNIANTHPNRPSLTTATYIQ |
||||||||||
| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0055800 | OsMH63_06T0055800.1 | Chr06 | 3124463 | 3127904 | - | maker | ||
| CDS seq | ATGGTATCCATCGTCGGGTGTGCGGGCTTGGGCAAGACCACTCTGGCCAAACAAGTGTACGACAAAATCAAAGGGGAATTCGAGTGCAAGGCCTTTGTTTCGGTGTCTCAGAAACCGAACATAAAGGAGCTTATCCTCAACATTTCTAATCAAGTTGGCAACAAGTCAACAAACATGTCGGATGATGTAGCAAATCTGGTGGATAATCTTAGGGAATATCTCAAGCAAAAAAGGTATATTGTCGTAGTGGATGATATATGGAACCCAGAACCATGGAACTTCATTGGAGAAGCATTGGTCAAAACTAGTCCTGGTAGCATAATAATTTTGACGACACGTGTGAAAGAAGTGGCGATGTCATCTTCATCTTCTCATGGTGGTTTTGTTTATCCGATGAAACATCTCGATGGCGCTCACTCCAAAAGGTTGTTTTACAAAAGAATTTTTGACTGTGAAGAGCAATGTCCTCCTGAATTTGAACAAGCTTCTAAAGAGATACTGGAAAGATGTGATGGTATACCCCTAGCAATCATTTCCATATCCAGCTTCTTGGCTGATCGTCAATCGTTATATCACTGGAATGAGGTAAAAAAAATTATCAGTTCTCCAATACCAGGAAATAAGGATCTTGAGACCATGCAATCAGTGTTAGCACTCAGTTATTACAACCTTCCACATGATTTAAGAAGTTGCCTGTTATACTTGAGTGCATTCCCAGAAGATTGTGAAATTGGAAAGACCCGTTTGGTAAGCAGATGGATTGCAGAAGGATTTATCAATGCAAGACCAGGAGAAAATCTATATGAAGCAGGGCTGAGGTATTTCAATGTGCTGATAAACCAGAGCTTGATCCAACCATGGAATGAGCACTACGGTGAGGTGCTGAGCTGCCGTGTTCACGACGTCATTCTTAATTTCATAGTGTCCAAATCAGTAGAGGAGAACTTTATGACCTTGTTGGATCCGTCTGGTCCTGTACCTTTGCAGCATAGCAACTGCTGCAAGGTTCGTCGCATGTCTCTCCAGGGTAGCTACTGCCAAGAGAAATTTGCCTCGAGCATGAAGTCGATTAAGCCTCATGTCCGGTCACTTGCTTGTTCTATGGACTGCACAGGATTGCATCCTCTATCGGAATTTAAAGTTGCAAGAGTACTGGATCTAGAAGGGTGCGAATCATTGACAAACAACCATCTTGCTAATATAGAAAAGTTAGCCTATTTGAGGTATCTGAGCATTAGCGGAACAGGAGTAAGTGTGCTCCCCGCCAATATTGGGCGTCTCCAGCATTTGGAGACATTAGATATACTAGATACTCAAGTTAAAGAATTACCACCATCCATTGTTCTACTTCAGCAATTGGTTCGTCTGTCTGTCAATTCTGACGTCATGTTCCCTGCAGAAGGTGTTAGCAAGATGCAAGCATTGGAGCAGCTAACAGGTCTCTTGCCCTTCAATCAACCGGTAAGCTTTTTGAAGGAGCTAGGTGAGCTTACCAAGCTGAGAGTACTAGCGGTATCTTGGATTCCTGACCATGTTAGAGATTCTGATGAGGCCCATGCCGAGCATGAAAAGAGCTACGAGAAGATTTTCATCTCCTCACTTAATGCACTGGACAGACATAGCCTTCAATATCTAGATCTGTCTCTTTATTATTCTTATTCGGATATAGCTGCAAAACGCTTCTTGTTTGATTCGTGGTTCCCTTCCCTAAAAAACCTCCGGAGATTGAGCATTGTAAACGGGTTCAAGACGACAACCATTCCAAGTTGGATTCGCCTTGCTGCCAAGCTTGAGAAATTAGAGCTCAGTAAAGCATATGTTACTCAGGACGATCTCGAAATGCTTGGAGACCTGAAAGCTCTCGAATATCTTGCCCTTCCCTTTTCAGACACACAAGGATCATGGCTCACCATCAGCAACCATGGTTTCCGATGTCTCAAGTTTGCCTTTCTTTGCAACGTGTTGTTTATGCATGATTCCATGCCTAATCTGAAGGACCTCCACATTGGCATTAGATTGAATGTGGTTGGTGAGAATGATTCCTTCCAGCACCTCCCCAACACCCTCTGCAGAGTCCATGCCTGGATTTCTGGCAATCTAGATGCGGTCTCAAAACTGAAAGAAAAAATCTTGAACATTGCGAACACACATCCCAACCGTCCCTCACTCACGACTGCGACATACATTCAGTAG
More
|
|||||||
| Protein seq | MVSIVGCAGLGKTTLAKQVYDKIKGEFECKAFVSVSQKPNIKELILNISNQVGNKSTNMSDDVANLVDNLREYLKQKRYIVVVDDIWNPEPWNFIGEALVKTSPGSIIILTTRVKEVAMSSSSSHGGFVYPMKHLDGAHSKRLFYKRIFDCEEQCPPEFEQASKEILERCDGIPLAIISISSFLADRQSLYHWNEVKKIISSPIPGNKDLETMQSVLALSYYNLPHDLRSCLLYLSAFPEDCEIGKTRLVSRWIAEGFINARPGENLYEAGLRYFNVLINQSLIQPWNEHYGEVLSCRVHDVILNFIVSKSVEENFMTLLDPSGPVPLQHSNCCKVRRMSLQGSYCQEKFASSMKSIKPHVRSLACSMDCTGLHPLSEFKVARVLDLEGCESLTNNHLANIEKLAYLRYLSISGTGVSVLPANIGRLQHLETLDILDTQVKELPPSIVLLQQLVRLSVNSDVMFPAEGVSKMQALEQLTGLLPFNQPVSFLKELGELTKLRVLAVSWIPDHVRDSDEAHAEHEKSYEKIFISSLNALDRHSLQYLDLSLYYSYSDIAAKRFLFDSWFPSLKNLRRLSIVNGFKTTTIPSWIRLAAKLEKLELSKAYVTQDDLEMLGDLKALEYLALPFSDTQGSWLTISNHGFRCLKFAFLCNVLFMHDSMPNLKDLHIGIRLNVVGENDSFQHLPNTLCRVHAWISGNLDAVSKLKEKILNIANTHPNRPSLTTATYIQ
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.114607 | 1.675828 | 0.036825 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0158300 | SBH | 0.918229 | 0.691815 | 0.781452 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g06860 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0158300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0004720 | SBH | 0.0 | 4.015603 | 0.605101 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0004640 | SBH | 0.042734 | 0.598777 | 0.088820 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0004570 | RBH | 0.0 | 4.738573 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0004700 | RBH | 0.074877 | 0.146464 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0004600 | SBH | 1.066025 | 0.000000 | 0.383828 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0055600 | RBH | 0.2354465 | 2.0371815 | 0.2655435 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0004480 | SBH | 0.0 | 0.390189 | 0.073867 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0055700 | RBH | 0.2224535 | 1.0152775 | 0.038344 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0004730 | RBH | 0.148050 | 0.078334 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0004580 | SBH | 0.005467 | 2.900727 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0004630 | SBH | 1.727281 | 3.758378 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0004610 | RBH | 0.0 | 0.260673 | 0.247824 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0004490 | RBH | 0.000000 | 4.765694 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G004390 | RBH | 0.000000 | 9.550834 | 0.065641 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0004640 | RBH | 0.168848 | 4.881926 | 1.871208 |
