Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0036000 | OGI:06006220 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:2104362-2105747 | ||||||||
| Gene Symbol | MAK4 | ||||||||||
| DNA seq | TCATCGTCCCGACAGGTAGGAGAGCGCGAACGAGTTGCTGATCCCCGACGACGTCACCTGCATCCCGCCGTCGCTGGCCGCCGCCGGCGGCGGCAGGCCGAACGGGCCGGGGCCGCGCGCCGCCGGGTCGAGCGCGAGGAGGTCGACGACGATCATGTCCGACGGCGGCGGCGCCTCCACGGCCTCCGCGGCGGCGCCACGCCCCTCGAGCATCTCCACCACGCGCGCCATGGTGGGGCGCGCCCCCGCCTTCTCCTGCGCGCACCACAGCGCCACGTGGACCAGCCTCCGCACCGCCGCCTCCTCCACCGCCTCGCCGGACTCCACCACCCGCCTGTCCAGCACCTCCATCACCCTCCCTTCCCTCGCCATGTCTCCGGCGATCTTCGGGAAGTACGTCCACCGCGGCGACGCCGACGACCCGTCGTCGCCATTCTCCGCCTGCATCAGGTTGCGGCGGCCGCCGACCATCTCGAGCAGAACGAGACCGTAGCTGTACACGTCGGACTTCTCGGTGATGCCGACGCCGAGCAGCCACTCCGGCGCGAGGTACCCCGTCGTGCCGCGCACCGTGGTGACGACGCGGCTCTGCTCCTTCCCCACCAGCTTGGACAGCCCGAAGTCGGAGAGGACGCCGCGGAAGCCGTCGTCGAGGAGGATGTTCTCCGGCTTGACGTCGAGGTGGAGCACCTTGCTGCGGCAGTCATGGTGCAGGTAGGCGAGCGCCCTCGCCACGTCGACGGCGACCTGGTACCGCGCCGCCCACGGCAGGTACCTCCGGCGGCGGCGATCGCCGGAGTGCGGGGAGAAGATCCACCTGTCAAGGGAGCCGTGCTCCATGTACTCGTAGACGAGGAAGCGCGGCCCGCGCGGGACGAGGCAGAAGCCGACGAGGCGGACGAGGTGGGCGTGCTGCGCGCTGGCGATCGCCGACACCTCCGACTTGAACTCCTTATCGGCGTGGTCGGCGCCGCCGTCGATCCGCTTCACCGCCACCGCCGTGCCGTCGTCGAGGATGCCCTTGTACACCGTCCCCGACGAGCCCCGCCCGACGGCGTACTGGAACCCGTCCGTCGCCGCCGCCAGCGACTCGAGCGTGAGCTTGCGCGGCAGCCCGGCGACCTTGCGGAAGTAGCTGTACTCCACGCGGATCCGCTCGTCCTCCATCGACGGCAGCCGCCTCGCCATGCGCGCCGCCCGCCTCCGCTCGCCCGCCGCGTGGTGCAGCAGCGCCGCGGCGGCCGCCGACAGCGCGGCGGAGACGATGACGGCGGTGGAGAGGAAGAACGGCCGCGACAGCCGGAAGCGGAGGTAGAGAGCGAGCTCGAGGACCAGCAGCACGGCGGCGGCCGCGCCGGCGACGATCTTGGCCGTCTTGCTCTCCAT
More
|
||||||||||
| CDS seq | ATGGAGAGCAAGACGGCCAAGATCGTCGCCGGCGCGGCCGCCGCCGTGCTGCTGGTCCTCGAGCTCGCTCTCTACCTCCGCTTCCGGCTGTCGCGGCCGTTCTTCCTCTCCACCGCCGTCATCGTCTCCGCCGCGCTGTCGGCGGCCGCCGCGGCGCTGCTGCACCACGCGGCGGGCGAGCGGAGGCGGGCGGCGCGCATGGCGAGGCGGCTGCCGTCGATGGAGGACGAGCGGATCCGCGTGGAGTACAGCTACTTCCGCAAGGTCGCCGGGCTGCCGCGCAAGCTCACGCTCGAGTCGCTGGCGGCGGCGACGGACGGGTTCCAGTACGCCGTCGGGCGGGGCTCGTCGGGGACGGTGTACAAGGGCATCCTCGACGACGGCACGGCGGTGGCGGTGAAGCGGATCGACGGCGGCGCCGACCACGCCGATAAGGAGTTCAAGTCGGAGGTGTCGGCGATCGCCAGCGCGCAGCACGCCCACCTCGTCCGCCTCGTCGGCTTCTGCCTCGTCCCGCGCGGGCCGCGCTTCCTCGTCTACGAGTACATGGAGCACGGCTCCCTTGACAGGTGGATCTTCTCCCCGCACTCCGGCGATCGCCGCCGCCGGAGGTACCTGCCGTGGGCGGCGCGGTACCAGGTCGCCGTCGACGTGGCGAGGGCGCTCGCCTACCTGCACCATGACTGCCGCAGCAAGGTGCTCCACCTCGACGTCAAGCCGGAGAACATCCTCCTCGACGACGGCTTCCGCGGCGTCCTCTCCGACTTCGGGCTGTCCAAGCTGGTGGGGAAGGAGCAGAGCCGCGTCGTCACCACGGTGCGCGGCACGACGGGGTACCTCGCGCCGGAGTGGCTGCTCGGCGTCGGCATCACCGAGAAGTCCGACGTGTACAGCTACGGTCTCGTTCTGCTCGAGATGGTCGGCGGCCGCCGCAACCTGATGCAGGCGGAGAATGGCGACGACGGGTCGTCGGCGTCGCCGCGGTGGACGTACTTCCCGAAGATCGCCGGAGACATGGCGAGGGAAGGGAGGGTGATGGAGGTGCTGGACAGGCGGGTGGTGGAGTCCGGCGAGGCGGTGGAGGAGGCGGCGGTGCGGAGGCTGGTCCACGTGGCGCTGTGGTGCGCGCAGGAGAAGGCGGGGGCGCGCCCCACCATGGCGCGCGTGGTGGAGATGCTCGAGGGGCGTGGCGCCGCCGCGGAGGCCGTGGAGGCGCCGCCGCCGTCGGACATGATCGTCGTCGACCTCCTCGCGCTCGACCCGGCGGCGCGCGGCCCCGGCCCGTTCGGCCTGCCGCCGCCGGCGGCGGCCAGCGACGGCGGGATGCAGGTGACGTCGTCGGGGATCAGCAACTCGTTCGCGCTCTCCTACCTGTCGGGACGATGA
More
|
||||||||||
| Protein seq | MESKTAKIVAGAAAAVLLVLELALYLRFRLSRPFFLSTAVIVSAALSAAAAALLHHAAGERRRAARMARRLPSMEDERIRVEYSYFRKVAGLPRKLTLESLAAATDGFQYAVGRGSSGTVYKGILDDGTAVAVKRIDGGADHADKEFKSEVSAIASAQHAHLVRLVGFCLVPRGPRFLVYEYMEHGSLDRWIFSPHSGDRRRRRYLPWAARYQVAVDVARALAYLHHDCRSKVLHLDVKPENILLDDGFRGVLSDFGLSKLVGKEQSRVVTTVRGTTGYLAPEWLLGVGITEKSDVYSYGLVLLEMVGGRRNLMQAENGDDGSSASPRWTYFPKIAGDMAREGRVMEVLDRRVVESGEAVEEAAVRRLVHVALWCAQEKAGARPTMARVVEMLEGRGAAAEAVEAPPPSDMIVVDLLALDPAARGPGPFGLPPPAAASDGGMQVTSSGISNSFALSYLSGR |
||||||||||
| Function | Probable receptor-like protein kinase At5g20050 [UniProtKB/Swiss-Prot:Q94C25] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0036000 | OsMH63_06T0036000.1 | Chr06 | 2104362 | 2105747 | - | maker | ||
| CDS seq | ATGGAGAGCAAGACGGCCAAGATCGTCGCCGGCGCGGCCGCCGCCGTGCTGCTGGTCCTCGAGCTCGCTCTCTACCTCCGCTTCCGGCTGTCGCGGCCGTTCTTCCTCTCCACCGCCGTCATCGTCTCCGCCGCGCTGTCGGCGGCCGCCGCGGCGCTGCTGCACCACGCGGCGGGCGAGCGGAGGCGGGCGGCGCGCATGGCGAGGCGGCTGCCGTCGATGGAGGACGAGCGGATCCGCGTGGAGTACAGCTACTTCCGCAAGGTCGCCGGGCTGCCGCGCAAGCTCACGCTCGAGTCGCTGGCGGCGGCGACGGACGGGTTCCAGTACGCCGTCGGGCGGGGCTCGTCGGGGACGGTGTACAAGGGCATCCTCGACGACGGCACGGCGGTGGCGGTGAAGCGGATCGACGGCGGCGCCGACCACGCCGATAAGGAGTTCAAGTCGGAGGTGTCGGCGATCGCCAGCGCGCAGCACGCCCACCTCGTCCGCCTCGTCGGCTTCTGCCTCGTCCCGCGCGGGCCGCGCTTCCTCGTCTACGAGTACATGGAGCACGGCTCCCTTGACAGGTGGATCTTCTCCCCGCACTCCGGCGATCGCCGCCGCCGGAGGTACCTGCCGTGGGCGGCGCGGTACCAGGTCGCCGTCGACGTGGCGAGGGCGCTCGCCTACCTGCACCATGACTGCCGCAGCAAGGTGCTCCACCTCGACGTCAAGCCGGAGAACATCCTCCTCGACGACGGCTTCCGCGGCGTCCTCTCCGACTTCGGGCTGTCCAAGCTGGTGGGGAAGGAGCAGAGCCGCGTCGTCACCACGGTGCGCGGCACGACGGGGTACCTCGCGCCGGAGTGGCTGCTCGGCGTCGGCATCACCGAGAAGTCCGACGTGTACAGCTACGGTCTCGTTCTGCTCGAGATGGTCGGCGGCCGCCGCAACCTGATGCAGGCGGAGAATGGCGACGACGGGTCGTCGGCGTCGCCGCGGTGGACGTACTTCCCGAAGATCGCCGGAGACATGGCGAGGGAAGGGAGGGTGATGGAGGTGCTGGACAGGCGGGTGGTGGAGTCCGGCGAGGCGGTGGAGGAGGCGGCGGTGCGGAGGCTGGTCCACGTGGCGCTGTGGTGCGCGCAGGAGAAGGCGGGGGCGCGCCCCACCATGGCGCGCGTGGTGGAGATGCTCGAGGGGCGTGGCGCCGCCGCGGAGGCCGTGGAGGCGCCGCCGCCGTCGGACATGATCGTCGTCGACCTCCTCGCGCTCGACCCGGCGGCGCGCGGCCCCGGCCCGTTCGGCCTGCCGCCGCCGGCGGCGGCCAGCGACGGCGGGATGCAGGTGACGTCGTCGGGGATCAGCAACTCGTTCGCGCTCTCCTACCTGTCGGGACGATGA
More
|
|||||||
| Protein seq | MESKTAKIVAGAAAAVLLVLELALYLRFRLSRPFFLSTAVIVSAALSAAAAALLHHAAGERRRAARMARRLPSMEDERIRVEYSYFRKVAGLPRKLTLESLAAATDGFQYAVGRGSSGTVYKGILDDGTAVAVKRIDGGADHADKEFKSEVSAIASAQHAHLVRLVGFCLVPRGPRFLVYEYMEHGSLDRWIFSPHSGDRRRRRYLPWAARYQVAVDVARALAYLHHDCRSKVLHLDVKPENILLDDGFRGVLSDFGLSKLVGKEQSRVVTTVRGTTGYLAPEWLLGVGITEKSDVYSYGLVLLEMVGGRRNLMQAENGDDGSSASPRWTYFPKIAGDMAREGRVMEVLDRRVVESGEAVEEAAVRRLVHVALWCAQEKAGARPTMARVVEMLEGRGAAAEAVEAPPPSDMIVVDLLALDPAARGPGPFGLPPPAAASDGGMQVTSSGISNSFALSYLSGR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.582068 | 6.460978 | 0.0105055 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0142650 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g05070 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0142650 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0003130 | RBH | 0.106908 | 2.796971 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0003060 | RBH | 0.0 | 0.576318 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0003000 | RBH | 0.0 | 3.512207 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0003030 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0002980 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0002950 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0037500 | RBH | 0.416013 | 8.1286765 | 0.020091 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0003080 | RBH | 0.0 | 0.069793 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0002970 | RBH | 0.0 | 0.735463 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0002970 | RBH | 0.0 | 3.614781 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0003000 | RBH | 0.0 | 0.063592 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0002870 | RBH | 0.066441 | 3.844864 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G002890 | RBH | 0.0 | 0.510873 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0003080 | RBH | 0.0 | 5.758836 | 0.0 |
