Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0269800 | OGI:05047610 | 7/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:18520018-18524129 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAATCAGTTGCTGCCATGATATCCAATGGACTTTCCTTTTCTGACGGTCTTCTCCCCCACCAAAATTTCTGGATCAGCTGCATATATTCCTCACAGAGCCCTGCTGGAAGCTTAAACACACTCATCACGTAGGTCGGAATAGCCTGTAGGACTGATTTAATTAAAACTTCCTTCCCTCCCATAGAGAGGTATTTCTCATTCCAATCCGTTAATCTTTTCTCAAATCTCTCCTTCAAAGATTGGTATCTTCCTGCCTTCAGTCTACCCATCGGAGTAGGCAGACCAAGATATTTATCTTCAAAGGAAGTGTGCTGAACTTGCAAAAGTGATCTGATGTCAGACTGCAGAGCATCCCCACAATGCTTTCCAAACATCAAAGAACATTTGGCCAGGCTCAGGAGTTGGCCTGTGCTTTGCTCATACAAAGTAAGAGCACTCTTAACCACATTAGTCTGTTCCATATTTGATTTAAAGAACAACAGACTATCATCTGCAAACAAGAGATGGGAAATTCCAGGGGCTCTCCTGCAGACTTTCAGAGGTTGTAACCGTCCTAATCTTTCAGCTTCACTCAGCGCCGTTGATAAACCGTCTGCCACAAAGAGGAACAAATAGGGCGACAGGGGATCACCCTGTCGGAGGCCTCTGGTTAGTTTGAAGGATTCAAGCATGGATCCGTTGAAGCGAACAGCATAGCTAACAGAGGTAACACAGGTCATCAATAGCTGAATCCATTGAGAACAAAAACCAACCTTAAGAAGAGCTCCCTCCAGGTATCTCCAATCCACCCTATCATACGCCTTTGTAAGGTCCAACTTATAAGCACAGAATTGAGACTCAACTGATTTACACCGATTGATGGCATGGAAGCACTCAAAAGCTATGATAGCATTGTCAATGATCATCCGGCCGGGAATGAAGGCGCTTTGCGCTGGCGCGATAACATCCTAAAGTAACGGCCGCATCCTATTCACCAAACACTTAGCAATCACCTTGTAAATCACATTACAAAGGCTTATTGGTCTGTAATCTTTCAAATCCTTTGGCTCTTTCTTTTTCAGAATTAACACAATGGCAGTGTCATTTACACCTTGTGGCATTCTTCTTTGTTCAAAGAACAGCTTAACAGCCGCAATAATGTCCCGTTTCAACACATCCCAATTCTTCTGAAAGAACCTTGCCGGAAAACCATCCGGCCCCGGCGCTTTTAACGGACCCATATGGAACAAAGCATTTGAAATTTCATCATCAGAGAATTCTTTACAAAGCAGCTCATTCATCTCCGACGTGACTCTGCGCTGTACCAAATCAAGTATTGGTTCTGGCTCGATAGAAGGGTCATTAGTGTAAAGCTCTTTGAAGAAATTTGATGTCATATCTTCCATCTCCTCCCTCTTATCACACCAGGTTCCATCACTTCTCTGCAGCCTATTAATCTTGTTTTTCTTGTGGCGCCAAGCCGCTTTCCTATGAAAAAAGGATGTGTTTCGGTCACCTTCCTTCAACCAAGAGATTCTTGATCTCTGCTACCATTGCATTTCCTCCCTGTACAAGAGTTCATCCAGTTTCCTGGATATATCGAGATAGTCTTGATCACTAGCACACCTGCCTGCCATCTGAAGCTCTGCCAATCGATTCCTTGTTTCTTTAATATCTTTGCTAACTGAACCAAATTTATCACGGCTCCAAGTCTGTAGTGCTCCCATCACAGACTTCAAGCGGCTTGCCACCGAGCCTAAGTCTGATATATGTTCCTGTAGTTGCCAAGCAGATTTAATCTCATATGTCAGGTGCTCATCCCTCTCCCACATAATTTCATACCGCAGACACCGATCCCCTTTCTTAATGCGATCCACTCGGGAGGCTTGGAGAAGAATAGGACTGTGATCAGAACTGGACACAGTAAGGTGAATCACTTCTGCAGCAGGAAAGAGAGAAGACCAACTCTGGCTTGCTACTGCACGATCCAGCCGAACTCGCACATTATTCCTTCCTTTTTGCTTGTTATCAAAAGTCCAGGTGGCACCCGTGAAACCTAAATCAAACACATCGCAGTGCGACAAGACTTCCCGGAAAACCATCATCTGCTTCTCCCTTCTCTTGTGGTCAGAAAAATGCTCAAACTGCCACATAGCTTCATTAAAGTCGCCCACTAAGCACCATGGAGCAGCAGAATTTGATTTGATGCGACAAAGAAGAGTCCACATGTTATGCCTTTCGCTAGCTTTGGGCTCACCATACACAAAGGTGCATCGCCATTGCACAGGGCAGCTTTCGTCCTTAATGAGCACATCAATATATCTGAAGTTGTAGGATAGAAGATCCACTTGTACTGTGTCATCCCAAAAGAGGGCTAGTCCATCCCCCGTTCCTTCTCCAGGCACTAGTACACAATTCCGCAGCCCCAATCTCCATTTTAAGCCACACACTCTTTCTGTATTTTGACGTGTTTCAGACAAAAAAACCAGCTTGGGCTTGTGTGTTTGCACTAGGCAAACAAGATCTTGAACTGTCCGAGGCCGCCCTGATCCTCGGCAGTTCCAGCTTAAAATATTCATTGCTCCTGACGGGCTTCCTTTGGAATGCCCGTCAGGTGGATCGACTTTGTTGTCGATAGAGATAAACTCTTACTCCTCTTACTATCACCTCCAACTAGAACATCAAACGAAGGTCCATCATATCCTAGGCCAAGGAGAGATTTATCCATACTCCTCTTTCCTAGCACTGGTTTTCCCCCATCATCGATATTTTCCTTCTGTCCCTCACCAAGTTCGTCCTCTCTAAGCTGGTTTATAAGAGAGATATCTTCATGGATCACTGATAGGGGTGGAACATGTTCGTCCACCTCCTCACGGCCATTCCCAACACCTTCATCAAGCTGTTCGTACTGATTGATTGAATCTTTGCCAGACACCCAAGTCTCCCCTGCAGTCTCACTCCCTATTTGTCCCTCCTTAGCTTGCTGTGAAGCTGCATGGAAGGTAGGCTAATCTTCTTGAGTTTTTCCCATATGCTCCCACTGTTCAGCTAGCTTCCTGACCTCAACATCCTCCCTGGATTTTCCTAGGTTCCTAGCATTTAAACCCTTCAACTCTTCCTGCACTGTAGTGATCTCTGCCTATATCTCATCCCGGTTAGAAAAATTTTCCTTTACTGGAGCATTTTCCTCTGGCGAGTTCTTCTTCCTATCTTCCTTGCCTAATGGGCCATCTTTATTTCGGCTTCCCGCAGAAGCTGGCTTGGACTGGTTCTCACCTGGGAACCTTAGATTTCTCTTCGCGTTGTTGTCAACTTTACCAGGCAGAGCCCAACTACGATGTTCAAACTGCTTATAAGGTGACGCCCTGAGATTAAGGCCAAACCTCACCGTTTGCTTATCCGAGGGTAAATCACATTCCCTCTCCATGTGACCAATGTGGCCACAGTAAAAGCAAAACTGAGGGATCCTCTCATACTTGACATCATACCTCTGAACCACCGAAGATGACTCCTTGTCTTTTAGTTTCAGCCAACGCGTCAGTGGTTTATCCACAGGGTCCTCCACTCGAACTCTCATAAAATCATCCCATGCTCTTCCCTGATCATCCACCGCCACCTTACGAACCTCACCCAGCCTTGCACCAATCAATTTACCCATTGTTTCAGTCATCATAGACAGGGGTAGATCGTAAATTCTCACCCAAACTAGTAGCGAGTTCAGTTTCACATCCGAAGGTCTAGACTTGCCATCATACTCCGTGATCAGGAAAGCATCCCCTCGATAGATCCAAGGACCGCCTCCAGTCGCAAACCTGAAATCCCCTGCAAATTGGAATTCCAGTAGAAATCGATTATCATGCAGACGTTTGTACTCCATGCCTTGTCTCAAGCCCCATGCCTTTTGCATGGCTTCAAACAGTCCCTTTGTGCTGAAAGTCCTCCTTGAGAAGAACTTCCCAATGGCCACATACTGTGTATCAATCTGCTTTTTAGCCTCATCAAAGTCTACCACAATTGCATCTTCATCGTCTTCCTCCTCCGAAGCCCCGCCCTGATCTTCAATCGGTTCCTCATCGGCTGTTGCACCACCTTCATCACGATGACGATCGCGCGGATCTTCATGGGATGCCAT
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| CDS seq | ATGGCATCCCATGAAGATCCGCGCGATCGTCATCGTGATGAAGGTGGTGCAACAGCCGATGAGGAACCGATTGAAGATCAGGGCGGGGCTTCGGAGGAGGAAGACGATGAAGATGCAATTGTGGTAGACTTTGATGAGGCTAAAAAGCAGATTGATACACAGTATGTGGCCATTGGGAAGTTCTTCTCAAGGAGGACTTTCAGCACAAAGGGACTGTTTGAAGCCATGCAAAAGGCATGGGGCTTGAGACAAGGCATGGAGTACAAACGTCTGCATGATAATCGATTTCTACTGGAATTCCAATTTGCAGGGGATTTCAGGTTTGCGACTGGAGGCGGTCCTTGGATCTATCGAGGGGATGCTTTCCTGATCACGGAGTATGATGGCAAGTCTAGACCTTCGGATGTGAAACTGAACTCGCTACTAGTTTGGGTGAGAATTTACGATCTACCCCTGTCTATGATGACTGAAACAATGGGTAAATTGATTGGTGCAAGGCTGGGTGAGGTTCGTAAGGTGGCGGTGGATGATCAGGGAAGAGCATGGGATGATTTTATGAGAGTTCGAGTGGAGGACCCTGTGGATAAACCACTGACGCGTTGGCTGAAACTAAAAGACAAGGAGTCATCTTCGGTGGTTCAGAGGTATGATGTCAAGTATGAGAGGATCCCTCAGTTTTGCTTTTACTGTGGCCACATTGGTCACATGGAGAGGGAATGTGATTTACCCTCGGATAAGCAAACGGTGAGGTTTGGCCTTAATCTCAGGGCGTCACCTTATAAGCAGTTTGAACATCGTAGTTGGGCTCTGCCTGGTAAAGTTGACAACAACGCGAAGAGAAATCTAAGGTTCCCAGGTGAGAACCAGTCCAAGCCAGCTTCTGCGGGAAGCCGAAATAAAGATGGCCCATTAGGCAAGGAAGATAGGAAGAAGAACTCGCCAGAGGAAAATGCTCCAGCAGAGATCACTACAGTGCAGGAAGAGTTGAAGGGTTTAAATGCTAGGAACCTAGGAAAATCCAGGGAGGATGTTGAGCAAGCTAAGGAGGGACAAATAGGGAGTGAGACTGCAGGGGAGACTTGGGTGTCTGGCAAAGATTCAATCAATCAGTACGAACAGCTTGATGAAGGTGTTGGGAATGGCCGTGAGGAGGTGGACGAACATGTTCCACCCCTATCAGTGATCCATGAAGATATCTCTCTTATAAACCAGCTTAGAGAGGACGAACTTGGTGAGGGACAGAAGGAAAATATCGATGATGGGGGAAAACCAGTGCTAGGAAAGAGGAGTATGGATAAATCTCTCCTTGGCCTAGGATATGATGGACCTTCGTTTGATGTTCTAGTTGGAGGTGATAGAGCAATGAATATTTTAAGCTGGAACTGCCGAGGATCAGGGCGGCCTCGGACAGTTCAAGATCTTGTTTGCCTAGTGCAAACACACAAGCCCAAGCTGGTTTTTTTGTCTGAAACACGTCAAAATACAGAAAGAGTGTGTGGCTTAAAATGGAGATTGGGGCTGCGGAATTGTGTACTAGTGCCTGGAGAAGGAACGGGGGATGGACTAGCCCTCTTTTGGGATGACACAGTACAAGTGGATCTTCTATCCTACAACTTCAGATATATTGATGTGCTCATTAAGGACGAAAGCTGCCCTGTGCAATGGCGATGCACCTTTGTGTATGGTGAGCCCAAAGCTAGCGAAAGGCATAACATGTGGACTCTTCTTTGTCGCATCAAATCAAATTCTGCTGCTCCATGGTGCTTAGTGGGCGACTTTAATGAAGCTATGTGGCAGTTTGAGCATTTTTCTGACCACAAGAGAAGGGAGAAGCAGATGATGGTTTTCCGGGAAGTCTTGTCGCACTGCGATGTGTTTGATTTAGGTTTCACGGGTGCCACCTGGACTTTTGATAACAAGCAAAAAGGAAGGAATAATGTGCGAGTTCGGCTGGATCGTGCAGTAGCAAGCCAGAGTTGGTCTTCTCTCTTTCCTGCTGCAGAAGTGATTCACCTTACTGTGTCCAGTTCTGATCACAGTCCTATTCTTCTCCAAGCCTCCCGAGTGGATCGCATTAAGAAAGGGGATCGGTGTCTGCGGTATGAAATTATGTGGGAGAGGGATGAGCACCTGACATATGAGATTAAATCTGCTTGGCAACTACAGGAACATATATCAGACTTAGGCTCGGTGGCAAGCCGCTTGAAGTCTGTGATGGGAGCACTACAGACTTGGAGCCGTGATAAATTTGGTTCAGTTAGCAAAGATATTAAAGAAACAAGGAATCGATTGGCAGAGCTTCAGATGGCAGGCAGGAAAGCGGCTTGGCGCCACAAGAAAAACAAGATTAATAGGCTGCAGAGAAGTGATGGAACCTGGTGTGATAAGAGGGAGGAGATGGAAGATATGACATCAAATTTCTTCAAAGAGCTTTACACTAATGACCCTTCTATCGAGCCAGAACCAATACTTGATTTGGTACAGCGCAGAGTCACGTCGGAGATGAATGAGCTGCTTTGTAAAGAATTCTCTGATGATGAAATTTCAAATGCTTTGTTCCATATGGGTCCGTTAAAAGCGCCGGGGCCGGATGGTTTTCCGGCAAGGTTCTTTCAGAAGAATTGGGATGTGTTGAAACGGGACATTATTGCGGCTGTTAAGCTGTTCTTTGAACAAAGAAGAATGCCACAAGGTGTAAATGACACTGCCATTGTGTTAATTCTGAAAAAGAAAGAGCCAAAGGATTTGAAAGATTACAGACCAATAAGCCTTTGTAATGTGATTTACAAGGATGTTATCGCGCCAGCGCAAAGCGCCTTCATTCCCGGCCGGATGATCATTGACAATGCTATCATAGCTTTTGAGTGCTTCCATGCCATCAATCGGTGTAAATCAGTTGAGTCTCAATTCTGTGCTTATAAGTTGGACCTTACAAAGGCGTATGATAGGGTGGATTGGAGATACCTGGAGGGAGCTCTTCTTAAGCTATTGATGACCTGTGTTACCTCTGTTAGCTATGCTGTTCGCTTCAACGGATCCATGCTTGAATCCTTCAAACTAACCAGAGGCCTCCGACAGGGTGATCCCCTGTCGCCCTATTTGTTCCTCTTTGTGGCAGACGGTTTATCAACGGCGCTGAGTGAAGCTGAAAGATTAGGACGGTTACAACCTCTGAAAGTCTGCAGGAGAGCCCCTGGAATTTCCCATCTCTTGTTTGCAGATGATAGTCTGTTGTTCTTTAAATCAAATATGGAACAGACTAATGTGGTTAAGAGTGCTCTTACTTTGTATGAGCAAAGCACAGGCCAACTCCTGAGCCTGGCCAAATGTTCTTTGATGTTTGGAAAGCATTGTGGGGATGCTCTGCAGTCTGACATCAGATCACTTTTGCAAGTTCAGCACACTTCCTTTGAAGATAAATATCTTGGTCTGCCTACTCCGATGGGTAGACTGAAGGCAGGAAGATACCAATCTTTGAAGGAGAGATTTGAGAAAAGATTAACGGATTGGAATGAGAAATACCTCTCTATGGGAGGGAAGGAAGTTTTAATTAAATCAGTCCTACAGGCTATTCCGACCTACGTGATGAGTGTGTTTAAGCTTCCAGCAGGGCTCTGTGAGGAATATATGCAGCTGATCCAGAAATTTTGGTGGGGGAGAAGACCGTCAGAAAAGGAAAGTCCATTGGATATCATGGCAGCAACTGATTAA
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| Protein seq | MASHEDPRDRHRDEGGATADEEPIEDQGGASEEEDDEDAIVVDFDEAKKQIDTQYVAIGKFFSRRTFSTKGLFEAMQKAWGLRQGMEYKRLHDNRFLLEFQFAGDFRFATGGGPWIYRGDAFLITEYDGKSRPSDVKLNSLLVWVRIYDLPLSMMTETMGKLIGARLGEVRKVAVDDQGRAWDDFMRVRVEDPVDKPLTRWLKLKDKESSSVVQRYDVKYERIPQFCFYCGHIGHMERECDLPSDKQTVRFGLNLRASPYKQFEHRSWALPGKVDNNAKRNLRFPGENQSKPASAGSRNKDGPLGKEDRKKNSPEENAPAEITTVQEELKGLNARNLGKSREDVEQAKEGQIGSETAGETWVSGKDSINQYEQLDEGVGNGREEVDEHVPPLSVIHEDISLINQLREDELGEGQKENIDDGGKPVLGKRSMDKSLLGLGYDGPSFDVLVGGDRAMNILSWNCRGSGRPRTVQDLVCLVQTHKPKLVFLSETRQNTERVCGLKWRLGLRNCVLVPGEGTGDGLALFWDDTVQVDLLSYNFRYIDVLIKDESCPVQWRCTFVYGEPKASERHNMWTLLCRIKSNSAAPWCLVGDFNEAMWQFEHFSDHKRREKQMMVFREVLSHCDVFDLGFTGATWTFDNKQKGRNNVRVRLDRAVASQSWSSLFPAAEVIHLTVSSSDHSPILLQASRVDRIKKGDRCLRYEIMWERDEHLTYEIKSAWQLQEHISDLGSVASRLKSVMGALQTWSRDKFGSVSKDIKETRNRLAELQMAGRKAAWRHKKNKINRLQRSDGTWCDKREEMEDMTSNFFKELYTNDPSIEPEPILDLVQRRVTSEMNELLCKEFSDDEISNALFHMGPLKAPGPDGFPARFFQKNWDVLKRDIIAAVKLFFEQRRMPQGVNDTAIVLILKKKEPKDLKDYRPISLCNVIYKDVIAPAQSAFIPGRMIIDNAIIAFECFHAINRCKSVESQFCAYKLDLTKAYDRVDWRYLEGALLKLLMTCVTSVSYAVRFNGSMLESFKLTRGLRQGDPLSPYLFLFVADGLSTALSEAERLGRLQPLKVCRRAPGISHLLFADDSLLFFKSNMEQTNVVKSALTLYEQSTGQLLSLAKCSLMFGKHCGDALQSDIRSLLQVQHTSFEDKYLGLPTPMGRLKAGRYQSLKERFEKRLTDWNEKYLSMGGKEVLIKSVLQAIPTYVMSVFKLPAGLCEEYMQLIQKFWWGRRPSEKESPLDIMAATD |
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| Function | LINE-1 retrotransposable element ORF2 protein [UniProtKB/Swiss-Prot:P11369] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0269800 | OsMH63_05T0269800-mRNA-1 | Chr05 | 18520018 | 18524129 | - | maker | ||
| CDS seq | ATGGCATCCCATGAAGATCCGCGCGATCGTCATCGTGATGAAGGTGGTGCAACAGCCGATGAGGAACCGATTGAAGATCAGGGCGGGGCTTCGGAGGAGGAAGACGATGAAGATGCAATTGTGGTAGACTTTGATGAGGCTAAAAAGCAGATTGATACACAGTATGTGGCCATTGGGAAGTTCTTCTCAAGGAGGACTTTCAGCACAAAGGGACTGTTTGAAGCCATGCAAAAGGCATGGGGCTTGAGACAAGGCATGGAGTACAAACGTCTGCATGATAATCGATTTCTACTGGAATTCCAATTTGCAGGGGATTTCAGGTTTGCGACTGGAGGCGGTCCTTGGATCTATCGAGGGGATGCTTTCCTGATCACGGAGTATGATGGCAAGTCTAGACCTTCGGATGTGAAACTGAACTCGCTACTAGTTTGGGTGAGAATTTACGATCTACCCCTGTCTATGATGACTGAAACAATGGGTAAATTGATTGGTGCAAGGCTGGGTGAGGTTCGTAAGGTGGCGGTGGATGATCAGGGAAGAGCATGGGATGATTTTATGAGAGTTCGAGTGGAGGACCCTGTGGATAAACCACTGACGCGTTGGCTGAAACTAAAAGACAAGGAGTCATCTTCGGTGGTTCAGAGGTATGATGTCAAGTATGAGAGGATCCCTCAGTTTTGCTTTTACTGTGGCCACATTGGTCACATGGAGAGGGAATGTGATTTACCCTCGGATAAGCAAACGGTGAGGTTTGGCCTTAATCTCAGGGCGTCACCTTATAAGCAGTTTGAACATCGTAGTTGGGCTCTGCCTGGTAAAGTTGACAACAACGCGAAGAGAAATCTAAGGTTCCCAGGTGAGAACCAGTCCAAGCCAGCTTCTGCGGGAAGCCGAAATAAAGATGGCCCATTAGGCAAGGAAGATAGGAAGAAGAACTCGCCAGAGGAAAATGCTCCAGCAGAGATCACTACAGTGCAGGAAGAGTTGAAGGGTTTAAATGCTAGGAACCTAGGAAAATCCAGGGAGGATGTTGAGCAAGCTAAGGAGGGACAAATAGGGAGTGAGACTGCAGGGGAGACTTGGGTGTCTGGCAAAGATTCAATCAATCAGTACGAACAGCTTGATGAAGGTGTTGGGAATGGCCGTGAGGAGGTGGACGAACATGTTCCACCCCTATCAGTGATCCATGAAGATATCTCTCTTATAAACCAGCTTAGAGAGGACGAACTTGGTGAGGGACAGAAGGAAAATATCGATGATGGGGGAAAACCAGTGCTAGGAAAGAGGAGTATGGATAAATCTCTCCTTGGCCTAGGATATGATGGACCTTCGTTTGATGTTCTAGTTGGAGGTGATAGAGCAATGAATATTTTAAGCTGGAACTGCCGAGGATCAGGGCGGCCTCGGACAGTTCAAGATCTTGTTTGCCTAGTGCAAACACACAAGCCCAAGCTGGTTTTTTTGTCTGAAACACGTCAAAATACAGAAAGAGTGTGTGGCTTAAAATGGAGATTGGGGCTGCGGAATTGTGTACTAGTGCCTGGAGAAGGAACGGGGGATGGACTAGCCCTCTTTTGGGATGACACAGTACAAGTGGATCTTCTATCCTACAACTTCAGATATATTGATGTGCTCATTAAGGACGAAAGCTGCCCTGTGCAATGGCGATGCACCTTTGTGTATGGTGAGCCCAAAGCTAGCGAAAGGCATAACATGTGGACTCTTCTTTGTCGCATCAAATCAAATTCTGCTGCTCCATGGTGCTTAGTGGGCGACTTTAATGAAGCTATGTGGCAGTTTGAGCATTTTTCTGACCACAAGAGAAGGGAGAAGCAGATGATGGTTTTCCGGGAAGTCTTGTCGCACTGCGATGTGTTTGATTTAGGTTTCACGGGTGCCACCTGGACTTTTGATAACAAGCAAAAAGGAAGGAATAATGTGCGAGTTCGGCTGGATCGTGCAGTAGCAAGCCAGAGTTGGTCTTCTCTCTTTCCTGCTGCAGAAGTGATTCACCTTACTGTGTCCAGTTCTGATCACAGTCCTATTCTTCTCCAAGCCTCCCGAGTGGATCGCATTAAGAAAGGGGATCGGTGTCTGCGGTATGAAATTATGTGGGAGAGGGATGAGCACCTGACATATGAGATTAAATCTGCTTGGCAACTACAGGAACATATATCAGACTTAGGCTCGGTGGCAAGCCGCTTGAAGTCTGTGATGGGAGCACTACAGACTTGGAGCCGTGATAAATTTGGTTCAGTTAGCAAAGATATTAAAGAAACAAGGAATCGATTGGCAGAGCTTCAGATGGCAGGCAGGAAAGCGGCTTGGCGCCACAAGAAAAACAAGATTAATAGGCTGCAGAGAAGTGATGGAACCTGGTGTGATAAGAGGGAGGAGATGGAAGATATGACATCAAATTTCTTCAAAGAGCTTTACACTAATGACCCTTCTATCGAGCCAGAACCAATACTTGATTTGGTACAGCGCAGAGTCACGTCGGAGATGAATGAGCTGCTTTGTAAAGAATTCTCTGATGATGAAATTTCAAATGCTTTGTTCCATATGGGTCCGTTAAAAGCGCCGGGGCCGGATGGTTTTCCGGCAAGGTTCTTTCAGAAGAATTGGGATGTGTTGAAACGGGACATTATTGCGGCTGTTAAGCTGTTCTTTGAACAAAGAAGAATGCCACAAGGTGTAAATGACACTGCCATTGTGTTAATTCTGAAAAAGAAAGAGCCAAAGGATTTGAAAGATTACAGACCAATAAGCCTTTGTAATGTGATTTACAAGGATGTTATCGCGCCAGCGCAAAGCGCCTTCATTCCCGGCCGGATGATCATTGACAATGCTATCATAGCTTTTGAGTGCTTCCATGCCATCAATCGGTGTAAATCAGTTGAGTCTCAATTCTGTGCTTATAAGTTGGACCTTACAAAGGCGTATGATAGGGTGGATTGGAGATACCTGGAGGGAGCTCTTCTTAAGCTATTGATGACCTGTGTTACCTCTGTTAGCTATGCTGTTCGCTTCAACGGATCCATGCTTGAATCCTTCAAACTAACCAGAGGCCTCCGACAGGGTGATCCCCTGTCGCCCTATTTGTTCCTCTTTGTGGCAGACGGTTTATCAACGGCGCTGAGTGAAGCTGAAAGATTAGGACGGTTACAACCTCTGAAAGTCTGCAGGAGAGCCCCTGGAATTTCCCATCTCTTGTTTGCAGATGATAGTCTGTTGTTCTTTAAATCAAATATGGAACAGACTAATGTGGTTAAGAGTGCTCTTACTTTGTATGAGCAAAGCACAGGCCAACTCCTGAGCCTGGCCAAATGTTCTTTGATGTTTGGAAAGCATTGTGGGGATGCTCTGCAGTCTGACATCAGATCACTTTTGCAAGTTCAGCACACTTCCTTTGAAGATAAATATCTTGGTCTGCCTACTCCGATGGGTAGACTGAAGGCAGGAAGATACCAATCTTTGAAGGAGAGATTTGAGAAAAGATTAACGGATTGGAATGAGAAATACCTCTCTATGGGAGGGAAGGAAGTTTTAATTAAATCAGTCCTACAGGCTATTCCGACCTACGTGATGAGTGTGTTTAAGCTTCCAGCAGGGCTCTGTGAGGAATATATGCAGCTGATCCAGAAATTTTGGTGGGGGAGAAGACCGTCAGAAAAGGAAAGTCCATTGGATATCATGGCAGCAACTGATTAA
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| Protein seq | MASHEDPRDRHRDEGGATADEEPIEDQGGASEEEDDEDAIVVDFDEAKKQIDTQYVAIGKFFSRRTFSTKGLFEAMQKAWGLRQGMEYKRLHDNRFLLEFQFAGDFRFATGGGPWIYRGDAFLITEYDGKSRPSDVKLNSLLVWVRIYDLPLSMMTETMGKLIGARLGEVRKVAVDDQGRAWDDFMRVRVEDPVDKPLTRWLKLKDKESSSVVQRYDVKYERIPQFCFYCGHIGHMERECDLPSDKQTVRFGLNLRASPYKQFEHRSWALPGKVDNNAKRNLRFPGENQSKPASAGSRNKDGPLGKEDRKKNSPEENAPAEITTVQEELKGLNARNLGKSREDVEQAKEGQIGSETAGETWVSGKDSINQYEQLDEGVGNGREEVDEHVPPLSVIHEDISLINQLREDELGEGQKENIDDGGKPVLGKRSMDKSLLGLGYDGPSFDVLVGGDRAMNILSWNCRGSGRPRTVQDLVCLVQTHKPKLVFLSETRQNTERVCGLKWRLGLRNCVLVPGEGTGDGLALFWDDTVQVDLLSYNFRYIDVLIKDESCPVQWRCTFVYGEPKASERHNMWTLLCRIKSNSAAPWCLVGDFNEAMWQFEHFSDHKRREKQMMVFREVLSHCDVFDLGFTGATWTFDNKQKGRNNVRVRLDRAVASQSWSSLFPAAEVIHLTVSSSDHSPILLQASRVDRIKKGDRCLRYEIMWERDEHLTYEIKSAWQLQEHISDLGSVASRLKSVMGALQTWSRDKFGSVSKDIKETRNRLAELQMAGRKAAWRHKKNKINRLQRSDGTWCDKREEMEDMTSNFFKELYTNDPSIEPEPILDLVQRRVTSEMNELLCKEFSDDEISNALFHMGPLKAPGPDGFPARFFQKNWDVLKRDIIAAVKLFFEQRRMPQGVNDTAIVLILKKKEPKDLKDYRPISLCNVIYKDVIAPAQSAFIPGRMIIDNAIIAFECFHAINRCKSVESQFCAYKLDLTKAYDRVDWRYLEGALLKLLMTCVTSVSYAVRFNGSMLESFKLTRGLRQGDPLSPYLFLFVADGLSTALSEAERLGRLQPLKVCRRAPGISHLLFADDSLLFFKSNMEQTNVVKSALTLYEQSTGQLLSLAKCSLMFGKHCGDALQSDIRSLLQVQHTSFEDKYLGLPTPMGRLKAGRYQSLKERFEKRLTDWNEKYLSMGGKEVLIKSVLQAIPTYVMSVFKLPAGLCEEYMQLIQKFWWGRRPSEKESPLDIMAATD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.018506 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g30520 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0018330 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0018330 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0018410 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0070900 | SBH | 0.014581 | 0.0056025 | 0.151993 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0017910 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0240600 | SBH | 0.0137285 | 0 | 0.045218 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0018230 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0018150 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0018290 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0018330 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0018350 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G017840 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
