Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0243000 | OGI:05042940 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:16729235-16731580 | ||||||||
| Gene Symbol | RLCK184, OsRLCK184, RLCK175, OsRLCK175, - | ||||||||||
| DNA seq | GGTCAGCATATATAATTTTACTTGGAGACAAATTATAAATCACAATATTAAGGAGTTCCCAGAGAAATCATCAATCACAATTGTTAGTATCCTATTATATATGGAGCTCCCAGATAACAAGCTTACAGATTTCATCCAAGGAAATGAAAAGGCTAAGTGGATGCCTATCAACAGCCACAGTATCAAGGAGTTCACGGAAGATGAGATTGAATGGATCACTAACAACTACAGCACTCCTATCGGCAAAGGTGGCTTTGGAGAAGTTTACAAGGGTTACCTTTATGGTGGTGACCCGGTTGCAGTGAAGAAATACATATGCCAGAATTCAAAAGAAGAGTTCGCTAAAGAGATTACGGTCCATCACCAAATCAACCACAAGAATGTCGTCAGGCTCTTGGGATATTGTGCAGAGGAAAATGCTTTGATGATAGTCACTGAGTTTATCCCGGGGGGAAGCCTCAGAGATCTTCTTCATGACAACGGCGGCCCTGTACCGTTAGATGGAAGGTTAAGTATTGCTATAGAATGCGCAGATGCATTACACTACATGCATTGCTCCGTATCTCAACCAATCGTTCATGGTGACATCAAGCCTGATAACATACTTCTAGACAACAACCTAGTTGCAAGATTGTCTGACTTTGGAATATCAAGGTTGATTTGCAATATGGACAAAATGCAGTACACCATACATGTTATAGGCAGCAGAGGTTACATAGATCCAGAACATATTGAAAGTGGGCTTGTTGATCCAAAGAACGATGTCTACAGTTTTGGAGTTGTTCTCTTGGAACTAATTACTAGAGCCAAAGCATGTGAAAATGGGTTAAGTACTGGCCTTGTAAGAAACTTCTCTCAGGCTCTTCAAAGAGGAAAGAAAAAGGCTAGGGAGATGTTTGACACTGAAATAGTAAACGCAACAAGGAACATGACTGTTCTAGACAATATAGGGAAGCTGGCAACTGAATGTCTCAGAAATGATATCAAACAACGTCCTGAGATGAAAGATGTCGCAGAGCGCCTCCGGTTGATTAGAAAAATGCATCGTGAAGAAGAAGAAAAGACTGGTCAATGGTCTCTATGGCGAAGGCTAGATAAGGTTAACAAACAAGACACAGGCTTTTCGAGTTCCAACTCCACTAGAGGCAGGTTTTTCGAGAGAGATGGAGAATTGGTATTGGGAAAAGATAGCACCTTGAAAATATTCACAGAAGAGGAATTAAGGAAAGCCACAAATAACTACTCACTTGATAATGTGATCCGAGGTAGCGAGCCAGTTGATAAAGTCTTCTCTTCAAAGAAAAAATATGAAGCCTACAGAGGGCGTCTTGAGGACAATATGCAGGTGGTAGTGAAGTGGGTCACCTTCGTAAGTAAAGATAATCAAGATGATTTTGTTAACAAACTGACTGTTGTATCTCGTTTTTCCCATAGAAACATCATCAAACTTTTGGGTTGCTGCTTTAATAAGCGTGACGCTGTGTTCTTGGTATACGAATATGCTACCAAGGGAAGTCTGCATGATATATTGCAGTCTGCAAGCGGTGATCTCCCACTCCAATTACGCTTGGATATTGCTACCGGATCTGCACATGCATTGGCATATTTGCATTCAGGGGCGACATCGACTGATATAATCCCACATGGGCATGTCAAATCTGCCAATATACTACTAGACGACAGTTTTGTGCCCAAGTTCTCCGATGTAGCAGCCATAATCCTGCGTGAACTCTACATTGCAGGGGATTTATCATATATTGTTCATTCACTTCGCTCAATGGAAGGGTTTTTCACACCAAAGAGAGATGTTTACAATTTTGGAATTGTCCTCTTGGAACTTATAACAATGAAACAATATAATGGCTACTGCATCCTACCCCATGAATTTATCGAGGTTTATGAGAAAGAGAAGAGCGGGAGAGCCATGTTTGACAAAGAGATTGCAGCCAAGGAAGAAAACATTGCTATTCTTGAAGAGATGGCCAAGCTGGCAACCGAGTGCTTCAAGAGGGACAGTAAGGAGCGACCAGATATGGTAGAGGTGGCAAAATGTCTTGAGAAACTTCAAAAGAGGTCGGCACCGTAAGTGATGGTAGAGGTTGCTGTTAACTGAGCATTATTAAACCCAATGCATTATTCCATGGGTAATCATCCCAATGCACTATTTTTTTTAGATAATGGAATTTAACATCCCAGCCTTTGCTCAAAAAGAGCTACAGCCAATTATTACATTGTATCAATCTAGAAAAGAGCGTAGTTCAGCTAAATAGGACACACCAAACAAAAACAGAGGAAACTAAGCCAAAATAAGGAGAACACATTTATTGAAGTCTATTTGTGAACCTC
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| CDS seq | GTCAGCATATATAATTTTACTTGGAGACAAATTATAAATCACAATATTAAGGAGTTCCCAGAGAAATCATCAATCACAATTGTTAGTATCCTATTATATATGGAGCTCCCAGATAACAAGCTTACAGATTTCATCCAAGGAAATGAAAAGGCTAAGTGGATGCCTATCAACAGCCACAGTATCAAGGAGTTCACGGAAGATGAGATTGAATGGATCACTAACAACTACAGCACTCCTATCGGCAAAGGTGGCTTTGGAGAAGTTTACAAGGGTTACCTTTATGGTGGTGACCCGGTTGCAGTGAAGAAATACATATGCCAGAATTCAAAAGAAGAGTTCGCTAAAGAGATTACGGTCCATCACCAAATCAACCACAAGAATGTCGTCAGGCTCTTGGGATATTGTGCAGAGGAAAATGCTTTGATGATAGTCACTGAGTTTATCCCGGGGGGAAGCCTCAGAGATCTTCTTCATGACAACGGCGGCCCTGTACCGTTAGATGGAAGGTTAAGTATTGCTATAGAATGCGCAGATGCATTACACTACATGCATTGCTCCGTATCTCAACCAATCGTTCATGGTGACATCAAGCCTGATAACATACTTCTAGACAACAACCTAGTTGCAAGATTGTCTGACTTTGGAATATCAAGGTTGATTTGCAATATGGACAAAATGCAGTACACCATACATGTTATAGGCAGCAGAGGTTACATAGATCCAGAACATATTGAAAGTGGGCTTGTTGATCCAAAGAACGATGTCTACAGTTTTGGAGTTGTTCTCTTGGAACTAATTACTAGAGCCAAAGCATGTGAAAATGGGTTAAGTACTGGCCTTGTAAGAAACTTCTCTCAGGCTCTTCAAAGAGGAAAGAAAAAGGCTAGGGAGATGTTTGACACTGAAATAGTAAACGCAACAAGGAACATGACTGTTCTAGACAATATAGGGAAGCTGGCAACTGAATGTCTCAGAAATGATATCAAACAACGTCCTGAGATGAAAGATGTCGCAGAGCGCCTCCGGTTGATTAGAAAAATGCATCGTGAAGAAGAAGAAAAGACTGGTCAATGGTCTCTATGGCGAAGGCTAGATAAGGTTAACAAACAAGACACAGGCTTTTCGAGTTCCAACTCCACTAGAGGCAGGTTTTTCGAGAGAGATGGAGAATTGGTATTGGGAAAAGATAGCACCTTGAAAATATTCACAGAAGAGGAATTAAGGAAAGCCACAAATAACTACTCACTTGATAATGTGATCCGAGGTAGCGAGCCAGTTGATAAAGTCTTCTCTTCAAAGAAAAAATATGAAGCCTACAGAGGGCGTCTTGAGGACAATATGCAGGTGGTAGTGAAAAACATCATCAAACTTTTGGGTTGCTGCTTTAATAAGCGTGACGCTGTGTTCTTGGTATACGAATATGCTACCAAGGGAAGTCTGCATGATATATTGCAGTCTGCAAGCGGTGATCTCCCACTCCAATTACGCTTGGATATTGCTACCGGATCTGCACATGCATTGGCATATTTGCATTCAGGGGCGACATCGACTGATATAATCCCACATGGGCATGTCAAATCTGCCAATATACTACTAGACGACAGTTTTGTGCCCAAGTTCTCCGATGTAGCAGCCATAATCCTGCGTGAACTCTACATTGCAGGGGATTTATCATATATTGTTCATTCACTTCGCTCAATGGAAGGGTTTTTCACACCAAAGAGAGATGTTTACAATTTTGGAATTGTCCTCTTGGAACTTATAACAATGAAACAATATAATGGCTACTGCATCCTACCCCATGAATTTATCGAGGTTTATGAGAAAGAGAAGAGCGGGAGAGCCATGTTTGACAAAGAGATTGCAGCCAAGGAAGAAAACATTGCTATTCTTGAAGAGATGGCCAAGCTGGCAACCGAGTGCTTCAAGAGGGACAGTAAGGAGCGACCAGATATGGTAGAGGTGGCAAAATGTCTTGAGAAACTTCAAAAGAGGTCGGCACCGTAA
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| Protein seq | VSIYNFTWRQIINHNIKEFPEKSSITIVSILLYMELPDNKLTDFIQGNEKAKWMPINSHSIKEFTEDEIEWITNNYSTPIGKGGFGEVYKGYLYGGDPVAVKKYICQNSKEEFAKEITVHHQINHKNVVRLLGYCAEENALMIVTEFIPGGSLRDLLHDNGGPVPLDGRLSIAIECADALHYMHCSVSQPIVHGDIKPDNILLDNNLVARLSDFGISRLICNMDKMQYTIHVIGSRGYIDPEHIESGLVDPKNDVYSFGVVLLELITRAKACENGLSTGLVRNFSQALQRGKKKAREMFDTEIVNATRNMTVLDNIGKLATECLRNDIKQRPEMKDVAERLRLIRKMHREEEEKTGQWSLWRRLDKVNKQDTGFSSSNSTRGRFFERDGELVLGKDSTLKIFTEEELRKATNNYSLDNVIRGSEPVDKVFSSKKKYEAYRGRLEDNMQVVVKNIIKLLGCCFNKRDAVFLVYEYATKGSLHDILQSASGDLPLQLRLDIATGSAHALAYLHSGATSTDIIPHGHVKSANILLDDSFVPKFSDVAAIILRELYIAGDLSYIVHSLRSMEGFFTPKRDVYNFGIVLLELITMKQYNGYCILPHEFIEVYEKEKSGRAMFDKEIAAKEENIAILEEMAKLATECFKRDSKERPDMVEVAKCLEKLQKRSAP |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0243000 | OsMH63_05T0243000.1 | Chr05 | 16729235 | 16731580 | + | maker | ||
| CDS seq | GTCAGCATATATAATTTTACTTGGAGACAAATTATAAATCACAATATTAAGGAGTTCCCAGAGAAATCATCAATCACAATTGTTAGTATCCTATTATATATGGAGCTCCCAGATAACAAGCTTACAGATTTCATCCAAGGAAATGAAAAGGCTAAGTGGATGCCTATCAACAGCCACAGTATCAAGGAGTTCACGGAAGATGAGATTGAATGGATCACTAACAACTACAGCACTCCTATCGGCAAAGGTGGCTTTGGAGAAGTTTACAAGGGTTACCTTTATGGTGGTGACCCGGTTGCAGTGAAGAAATACATATGCCAGAATTCAAAAGAAGAGTTCGCTAAAGAGATTACGGTCCATCACCAAATCAACCACAAGAATGTCGTCAGGCTCTTGGGATATTGTGCAGAGGAAAATGCTTTGATGATAGTCACTGAGTTTATCCCGGGGGGAAGCCTCAGAGATCTTCTTCATGACAACGGCGGCCCTGTACCGTTAGATGGAAGGTTAAGTATTGCTATAGAATGCGCAGATGCATTACACTACATGCATTGCTCCGTATCTCAACCAATCGTTCATGGTGACATCAAGCCTGATAACATACTTCTAGACAACAACCTAGTTGCAAGATTGTCTGACTTTGGAATATCAAGGTTGATTTGCAATATGGACAAAATGCAGTACACCATACATGTTATAGGCAGCAGAGGTTACATAGATCCAGAACATATTGAAAGTGGGCTTGTTGATCCAAAGAACGATGTCTACAGTTTTGGAGTTGTTCTCTTGGAACTAATTACTAGAGCCAAAGCATGTGAAAATGGGTTAAGTACTGGCCTTGTAAGAAACTTCTCTCAGGCTCTTCAAAGAGGAAAGAAAAAGGCTAGGGAGATGTTTGACACTGAAATAGTAAACGCAACAAGGAACATGACTGTTCTAGACAATATAGGGAAGCTGGCAACTGAATGTCTCAGAAATGATATCAAACAACGTCCTGAGATGAAAGATGTCGCAGAGCGCCTCCGGTTGATTAGAAAAATGCATCGTGAAGAAGAAGAAAAGACTGGTCAATGGTCTCTATGGCGAAGGCTAGATAAGGTTAACAAACAAGACACAGGCTTTTCGAGTTCCAACTCCACTAGAGGCAGGTTTTTCGAGAGAGATGGAGAATTGGTATTGGGAAAAGATAGCACCTTGAAAATATTCACAGAAGAGGAATTAAGGAAAGCCACAAATAACTACTCACTTGATAATGTGATCCGAGGTAGCGAGCCAGTTGATAAAGTCTTCTCTTCAAAGAAAAAATATGAAGCCTACAGAGGGCGTCTTGAGGACAATATGCAGGTGGTAGTGAAAAACATCATCAAACTTTTGGGTTGCTGCTTTAATAAGCGTGACGCTGTGTTCTTGGTATACGAATATGCTACCAAGGGAAGTCTGCATGATATATTGCAGTCTGCAAGCGGTGATCTCCCACTCCAATTACGCTTGGATATTGCTACCGGATCTGCACATGCATTGGCATATTTGCATTCAGGGGCGACATCGACTGATATAATCCCACATGGGCATGTCAAATCTGCCAATATACTACTAGACGACAGTTTTGTGCCCAAGTTCTCCGATGTAGCAGCCATAATCCTGCGTGAACTCTACATTGCAGGGGATTTATCATATATTGTTCATTCACTTCGCTCAATGGAAGGGTTTTTCACACCAAAGAGAGATGTTTACAATTTTGGAATTGTCCTCTTGGAACTTATAACAATGAAACAATATAATGGCTACTGCATCCTACCCCATGAATTTATCGAGGTTTATGAGAAAGAGAAGAGCGGGAGAGCCATGTTTGACAAAGAGATTGCAGCCAAGGAAGAAAACATTGCTATTCTTGAAGAGATGGCCAAGCTGGCAACCGAGTGCTTCAAGAGGGACAGTAAGGAGCGACCAGATATGGTAGAGGTGGCAAAATGTCTTGAGAAACTTCAAAAGAGGTCGGCACCGTAA
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| Protein seq | VSIYNFTWRQIINHNIKEFPEKSSITIVSILLYMELPDNKLTDFIQGNEKAKWMPINSHSIKEFTEDEIEWITNNYSTPIGKGGFGEVYKGYLYGGDPVAVKKYICQNSKEEFAKEITVHHQINHKNVVRLLGYCAEENALMIVTEFIPGGSLRDLLHDNGGPVPLDGRLSIAIECADALHYMHCSVSQPIVHGDIKPDNILLDNNLVARLSDFGISRLICNMDKMQYTIHVIGSRGYIDPEHIESGLVDPKNDVYSFGVVLLELITRAKACENGLSTGLVRNFSQALQRGKKKAREMFDTEIVNATRNMTVLDNIGKLATECLRNDIKQRPEMKDVAERLRLIRKMHREEEEKTGQWSLWRRLDKVNKQDTGFSSSNSTRGRFFERDGELVLGKDSTLKIFTEEELRKATNNYSLDNVIRGSEPVDKVFSSKKKYEAYRGRLEDNMQVVVKNIIKLLGCCFNKRDAVFLVYEYATKGSLHDILQSASGDLPLQLRLDIATGSAHALAYLHSGATSTDIIPHGHVKSANILLDDSFVPKFSDVAAIILRELYIAGDLSYIVHSLRSMEGFFTPKRDVYNFGIVLLELITMKQYNGYCILPHEFIEVYEKEKSGRAMFDKEIAAKEENIAILEEMAKLATECFKRDSKERPDMVEVAKCLEKLQKRSAP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.209003 | 3.924382 | 0.131321 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g30820 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0012740 | RBH | 0.0 | 16.160234 | 1.700753 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0012800 | RBH | 0.0 | 0.068409 | 0.486527 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0012710 | RBH | 0.0 | 5.950537 | 1.626395 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0012780 | RBH | 0.0 | 0.264685 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0012800 | RBH | 0.0 | 4.601079 | 7.040386 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0012480 | SBH | 0.0 | 0.395021 | 0.206961 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0251100 | RBH | 0.0597285 | 0.556649 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0012700 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0012630 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0012710 | RBH | 0.0 | 2.420824 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0012740 | RBH | 0.0 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0012800 | RBH | 0.0 | 3.754827 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G012430 | RBH | 0.0 | 0.959536 | 0.525262 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0012740 | RBH | 0.0 | 12.742961 | 0.885243 |
