Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0050000 | OGI:05009380 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:3478547-3484076 | ||||||||
| Gene Symbol | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | ||||||||||
| DNA seq | TCGCAGCCAACTCCAACATCCTGAGCTCCAATCTCCCACTCCATTCCGGCCGCGCATTCTCCCGCTCTCGATCGATCGATCGATCATGGTGGTGCCTTCCGCGACGACGCCAGCGAGGCAGGAGACGGTGGTGGCGGCGGCGCCGCCAGCTGCGGCGGCGTCCGGTGTCGTCGGCGGCGGCGGCGGCGTGACGATAGCGACGGTGGACATGTCGGCGGAGCGCGGCGCGGTGGCGAGGCAGGTGGCGACGGCGTGCGCGGCGCACGGGTTCTTCCGGTGCGTCGGGCACGGCGTGCCGGCGGCGGCGCCCGTCGCGGCGAGGCTGGACGCCGCGACGGCGGCGTTCTTCGCGATGGCGCCGGCGGAGAAGCAGCGCGCCGGGCCGGCGAGCCCGCTCGGGTACGGCTGCCGGAGCATCGGGTTCAACGGCGACGTCGGCGAGCTGGAGTACCTGCTCCTCCACGCCAACCCCGCCGCCGTCGCGCACCGGGCCAGGACCATCGACGCCATGGACCCCTCTCGCTTCAGGTACGTACAATACCACCACTCACTCTTAGCCTAGCTTAATCGATTAGTTTTTTACTCCCTCCATTTCTCCGTTTCCCCGTTTCATGTTATAAGATGTTATGGGTTTTTGAATAGATTCACGTTTCACGCTATAAAATGTTCTGGGTTTTGAATAAATTCATGCATGATCTATTGATGAACTTTTAAGAGTCCAAAACATTTTGTAACATGGAACGGATGGAGTGGCGTATTGTGTTGCGCCTACGTGTCAAAGTATGCATGCTTACATGGCACACGTATTTAAAACATTGTAATGCATGTATATAACTAATGTTCTCTATGGTTTAATTTTTTCTTAATGCTACCCATGCATATTCTATAATAAATAAAGTGTGCCGGACTCCGGTCACAGAAGAATATATTTGTTTTAATGTATCAGTTTAACTTCGACGATAATTATTATTGTTCGAAGTACAAATTTTCGGCATATTTAATAGTGTGGCCTTGTTCTATCAAAACATAATTTTTCGTAAGAGATTATATACTTGTATAACTTATTTTTGGATTGTAGGGATCCTTTCCCTATGGTTTTACTTCAAAAGATGACTTACATTTGGATTGGTGATAAAGAATATACAACTAAGTAGACAAAGTTATATCTAGTTCATTTTGAAAAGTTCAAGGCTCTTTTTTCAACGGGAAAGGAGTATCCTATATAAGATATATTATACAGTTAACTCTGTGCCTTTTAAAAGCTCTGTTGACAGTAAAATCTCATGTAGCTGGTTCATCCAAAAAAAAAAAATTCTCATGTAGCTGGGCATACACGAGCCTTTTTTTTTTTAAGAACTTACATACACGAGCTTAATTACTTCTCTCGATCCTTTTGCGGATGCGCTTGGTTGCTCGTAATAAATTTTGTCACAAATCTTTGATAACCCCACCATTTCCCAAATTTAAGCATACATGGTGGTAGAACTATATTCACTAAGTTTTACAGTGTCGTTGTTACAACAATAAACTAATATTGCAAATATTGCAATAGTTACAATATAATTAATTTCTTCTATGTATTATGTACTGAAACGCATATCAATCACATGCATGGCACTGCATATATGGTCTTAAACTATATATGAGGCAACGTGAATAATATATATTATTAATTAAGTATTACCCGTATACACACACATACACATATAATTAAAGATTGTCATTTTTATTATTTTTGCTAGACCCCTCGTCCCTGTGCATCACTAAAGTATTTTTATTGAACTAGCTGACCTCTACAGGGGTTTAAAGCTTGATTACTTAATTAAACTGTTAATGAAAGACGACTATATATGATCCAATAATATGTTAATTAAGACGGTGCATGGGTGTCCGGTGTCCCTGCAGTGTGAGATGAACATGCAAAAAAAATTAAATATATATCATGCTGTGTTCCTTAACTAACCGGCCACATCTACATATTCATGTCATAATCCTGCATCTGTCTCACTGCTGATGTGATGCCGTCCAAGCAGTAGTAGTGTGGGTTGGTAGCAGTAAAAGGGTTTTGTCAGCTTGGTTAGGTTTTCCTATCTACAATATATCTATCTATCTTTTTCATGTGTTGTCAAAATACAGTGAGATATGCTTACATATTTCTGCATCTGAGTACTGCTCAGGGGTGATGCAACGAAGCATCAGGTACATATCTATATATTTAGAGGGCTCAGGGCTCCATCGTTTAGCCTTCAGTTTATAGGCATAAGAAAAAATAAATTTTATAGTTAATTTTTAGGTTTTTTTATCGTAATTTATTTTTTCAGTATTTACTAAGAACATGTGTATAAAAGTTTTATCTATATATTATTTTTTAATCACTAATATACTGTTTCGCTTATAACTATATAGTAGTATAAGGTATAGACTTGCATGATGTCTATCTACATGCATGCATGGGATGCATATGTAGGATAGGCTTGGCTTGAGAGATGTCTAGCTAGCTATGGGTTTTTCATCAGCTACAGGGCAATTAATTTATAGATATGCATAATATATTGTGTTCAGAAGTCAAAAGAAGGCCAAGTTGGAATCATGCATACCTGCACTGCACTCATGCCAGTTGCAAGCTTGCAATTGCAACTGGGCTTGCTTCTTTTCTTTTCAGCTGGTTTGGCTTGCATATTTTCCATGTTATGATCTTCTGATGTAGCCTTTTGACTATATATCAAGGATGGACTAAATGTTAGTTTACACAATAAGGAAAAGGATGGAAATGTTACACTCATGTCATCATATACTATAACTTAAGGTAAATTAAGATCAATTTACATTAATTTTATTAAGAAAAAGTTGACTCAAGAAAGCTGCAGTTTATGTTATAATTTTAACTTATTATGTTAGCATATGGGGTTTTCATTTTTAATTCTTCATAGTACTACTTCAGTACATATCCATATGTATATTGTCATTTTCAGACACAGGTCCCATCAATTAAATCACGGAAATGCATGAGTACATAGTTTTCAAAACAATAATTATCACAATAATGGCATAATTGATGCTATGATGGACAGGCCAATGATAAGTTAGTTCCAACAATTTAAGATCATACATAGCTAGTTTCTAAAGCAAAAGAAAAGCATGCAACTGATGGGACATAACAAACTTGATAGCTCCACAAAATGGGCATAAGAAATTTTCTAATGAAAGTTAGGTATCATTGTCTAACCAAATAGACATTGGAAAAGGATCAAGCATACCAATTGATATTTTCATTTTTGCTCTAAAAAATGACTACATAAGTGGTTTTGAAAGCGAAAGCGAATATTGCCATTGGAGAAAATGTCTACCAACTAAGACAATAATATATCAGATTTTCCTTAACTATCTTTGTGTATGCTGAATGAGAGCTCACATACTAGGAGAGATTACTCACCACTCACTGACTGTACTCAGAACCAGGTAGTGGCCTAATCAGAGTTTGCTGAGAGAAAATATGATGAAATGGACAAGAAAACCCTCACTTAGGTAGTTAGAAGACTCCTCTCAGGGTCCCTCTCCAACAAACTGTATATATTTGTGTATCAACCAATCTGACATATATGCAGTGGTTTCCAATTAATGGCAATATCCAACCACCAACTGATGCAGCAACAGAGTGAGTACTTGAAGCATCCTTATCTACCAGAAAGCTCTGCAAGCTTAATTAGCAAAGTACAGCAGGTTTTCATGTAGAAAATGATGTGTTTAGTTGGGATATACATGATATATACTTTTTGAAACTCCTCTTAGTTCTCTATCACCATACATACATCAGCCATTAATATATAATATCCATACTAGTACAAGAATATTAATCTTAATGCCTTAATCAACTCAAAAGCCTAAGCTTAATTATCACAAGCACATCATTTTGGAAACATATTGATAGCAACATGCCAGTGAAGTAGTGAACACAAAGAATGGGATAATAATGATCAAGAATGCATCAGGTTAAGAACAGAATGGCTAGGAAATCTTCACAGTAACCATTTTGCTATATGAAAAGTGCAAGACAAGAAGGAAGAACAACCTCTTTTTGTCAAATGCAACAGACAGGGGCCCACATGGAAGTACACACATGTCTGATGAGAATAAAATGATCCAGGCCCCTAAAGAGCATATCTATGCTATCCATATAAAGCCAAACAAAAGAAAGGAGGCACACATGCAAGGAGTCCTCTTTATGGTAAGATAAAATGAAATGTCCCAGAGGTTGTGTAGTGGCAGGGGCAGTGATACTTGTGATCCACGCACTGATGGGTCTTTCCATGGAGCAGTGGAAAAAAGTATGGCCAATCCTGTCAACAACACATTTTTGCCCATTGGAAAATTTGTCACCCCTCGGCTGCATGATGTACTGCTGATTCTGTGGCCTATCCATGCATCACAAGATTCACAAGAAACGAATATATCACGTCTTGTAGATGGTGGTGCACAAGCACAGAGGCATACACATATACCCATCAGTGTATCATCTTTTCTAACTCATCAGGCAGGCATGCCGAGGGAGGGTGGGTGCAGCTTTTGATTTGCTGCAGCCATCAATCAGTCAAAGACCTTGCTCCTCTTTCTCCAGCTTCTTTTTACTTGTCATGGCACATCCAACCTGATTCTGTGATAACAGCATTCTTTTGATAAAATCAATTTCAAGTTGATTGTGCTCACTTGCTGATATCCTCCCTCACTCTGTTGCAGTGCTATTGTGAATGAGTACATTGAAGCCATGAAGAAGCTCGCATGTGAGATCCTGGACCTGTTAGGAGAGGGGCTAGGTCTCAAGGACCCCAGATACTTCAGCAAGCTTACCACAAACGCTGACAGTGACTGCCTCCTGAGGATCAACCACTACCCTCCATCATGCAACATTCACAAACTTGACCATGATGACCAATGCAATATCAAGAGCCTTGTTAGCACCAAGGCTAGCAATGGTGGGAATCTGATGGCAGGTGGGCGCATTGGGTTCGGCGAGCACTCTGACCCGCAGATCCTTAGCTTGCTCCGAGCAAACGATGTGGAAGGGCTACAGGTGTTTGTGCCGGACCACGAGGGCAAGGAGATGTGGGTTCAGGTGCCATCGGACCCATCGGCCATTTTCGTCAATGTTGGTGATGTCCTCCAGGTAGTCACAGTAAATGACTAGAGCAAAAAAAAACAGCATTACATATATCAGAATAAGGTTTACTATTATCAAAAGATATTATTTCATAGATTATAAAAGGACCGCAAAGAAATTATTTCATAGATTATAAAAGGACCGCATTGACTATCATATGATTTACAAATTATGTGGCTTTCTTCCAGTTATTCATAAAAAATGTTTCTTTGCTCACTGCAAAACACACAGGAAAGTAATATATATTTAATCATTTGATTCATAAGGCTGCAGCACTGCTGAACAATGTTTCTTTTGTCAAAAAAAATGCAACACTGATATGTTTGTTATTTTCAGACTCAAATTCATTGTATTGCTGCAATTCTTACCAGCTGA
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| CDS seq | ATGAAGAAGCTCGCATGTGAGATCCTGGACCTGTTAGGAGAGGGGCTAGGTCTCAAGGACCCCAGATACTTCAGCAAGCTTACCACAAACGCTGACAGTGACTGCCTCCTGAGGATCAACCACTACCCTCCATCATGCAACATTCACAAACTTGACCATGATGACCAATGCAATATCAAGAGCCTTGTTAGCACCAAGGCTAGCAATGGTGGGAATCTGATGGCAGGTGGGCGCATTGGGTTCGGCGAGCACTCTGACCCGCAGATCCTTAGCTTGCTCCGAGCAAACGATGTGGAAGGGCTACAGGTGTTTGTGCCGGACCACGAGGGCAAGGAGATGTGGGTTCAGGTGCCATCGGACCCATCGGCCATTTTCGTCAATGTTGGTGATGTCCTCCAGACTCAAATTCATTGTATTGCTGCAATTCTTACCAGCTGA
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| Protein seq | MKKLACEILDLLGEGLGLKDPRYFSKLTTNADSDCLLRINHYPPSCNIHKLDHDDQCNIKSLVSTKASNGGNLMAGGRIGFGEHSDPQILSLLRANDVEGLQVFVPDHEGKEMWVQVPSDPSAIFVNVGDVLQTQIHCIAAILTS |
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| Function | Gibberellin 2-beta-dioxygenase 1 [UniProtKB/Swiss-Prot:Q5W726] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0050000 | OsMH63_05T0050000-mRNA-1 | Chr05 | 3478547 | 3484076 | + | maker | ||
| CDS seq | ATGAAGAAGCTCGCATGTGAGATCCTGGACCTGTTAGGAGAGGGGCTAGGTCTCAAGGACCCCAGATACTTCAGCAAGCTTACCACAAACGCTGACAGTGACTGCCTCCTGAGGATCAACCACTACCCTCCATCATGCAACATTCACAAACTTGACCATGATGACCAATGCAATATCAAGAGCCTTGTTAGCACCAAGGCTAGCAATGGTGGGAATCTGATGGCAGGTGGGCGCATTGGGTTCGGCGAGCACTCTGACCCGCAGATCCTTAGCTTGCTCCGAGCAAACGATGTGGAAGGGCTACAGGTGTTTGTGCCGGACCACGAGGGCAAGGAGATGTGGGTTCAGGTGCCATCGGACCCATCGGCCATTTTCGTCAATGTTGGTGATGTCCTCCAGACTCAAATTCATTGTATTGCTGCAATTCTTACCAGCTGA
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| Protein seq | MKKLACEILDLLGEGLGLKDPRYFSKLTTNADSDCLLRINHYPPSCNIHKLDHDDQCNIKSLVSTKASNGGNLMAGGRIGFGEHSDPQILSLLRANDVEGLQVFVPDHEGKEMWVQVPSDPSAIFVNVGDVLQTQIHCIAAILTS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.5381565 | 6.4431595 | 1.211367 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0158600 | RBH | 0.233149 | 0.119682 | 49.877514 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g06670 | RBH | 0.153728 | 0.000000 | 11.322511 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0158600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0004230 | RBH | 0.030198 | 0.831486 | 38.641613 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0004270 | RBH | 0.0 | 0.0 | 27.121450 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0004180 | RBH | 0.156887 | 3.820884 | 75.413864 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0004260 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0004300 | RBH | 0.000000 | 0.000000 | 204.704681 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0213400 | RBH | 0.1048835 | 0.1527485 | 0.031569 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0004080 | RBH | 0.074158 | 0.297883 | 16.046915 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0051000 | RBH | 0.6656605 | 8.0229635 | 2.6809195 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0004230 | RBH | 0.0 | 0.035353 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0004140 | RBH | 0.0 | 0.764263 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0004230 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0004250 | RBH | 0.099135 | 0.321136 | 15.274749 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0004300 | RBH | 0.000000 | 2.177161 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G004170 | RBH | 0.000000 | 0.000000 | 16.392864 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0004380 | RBH | 0.000000 | 3.988183 | 110.307198 |
