Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0451100 | OGI:04085340 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:30547362-30549059 | ||||||||
| Gene Symbol | DREB1E, OsDREB1E, OsERF030, OsERF#030, OsERF30, ERF30, AP2/EREBP#160, AP2/EREBP160, OsDREB1-1, CR350 | ||||||||||
| DNA seq | CTACTGTGCCACCCCGCGTAGCAGCAGTGGACGCGCACGCTCTCGCGCTCGCAGCATCCCCCACCCGTCAAGTGCATAACTATATAAAGCCGCCGCCCCGGTCCGTTTTCCTTTCCTCCCAAATCAAGACCAAGTCGGATAATTTCAAATCCTTGTCGAGTGAACTGATCCATCGATGGAGTGGGCGTACTACGGCAGTGGGTACTCCTCGTCGGGGACGCCGTCGCCGGTGGGCGGCGACGGGGACGAGGACTCGTACATGACGGTGTCGTCGGCGCCGCCCAAGCGGCGGGCGGGGAGGACCAAGTTCAAGGAGACGAGGCACCCGGTGTACAAGGGCGTGCGCAGCAGGAACCCCGGGAGGTGGGTCTGCGAGGTGCGCGAGCCGCACGGCAAGCAGAGGATCTGGCTCGGCACCTTCGAGACCGCCGAGATGGCGGCGCGCGCGCACGACGTCGCGGCGATGGCGCTGCGCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCGCCGCGCAGGCTCCGCGTGCCGCCGCTGGGGGCCGGGCACGAGGAGATACGCCGCGCCGCGGTCGAGGCCGCCGAGCTGTTCCGCCCGGCGCCCGGGCAGCACAATGCGGCTGCCGAGGCGGCGGCCGCTGTCGCTGCGCAGGCAACCGCGGCGAGCGCGGAGCTCTTTGCCGACTTCCCTTGCTACCCGATGGACGGACTGGAATTCGAAATGCAGGGGTACCTCGACATGGCACAGGGAATGCTCATCGAGCCGCCGCCATTGGCAGGGCAATCGACGTGGGCCGAGGAGGACTACGACTGCGAGGTCAATCTATGGAGCTACTGATGATCGCCCGTGCACCTGAACCGAACCAGCCCTGATGAGCAGGAGGACTCAATGTACAGCTTATTATGGTATATAATCAAGTACGAACCGTACTTATGGTGTGCCGTTTCCCTGCTATTCTGACGAAAATGGAATGCGATCAGAAGGAGCAGAGGAGTGTCCTTTAGGTTGGTAGAGGGGGCTCCATGCTCGTGCGACACTGGCAATGGGGGCCAAAAATTTTATTGGCGCCAGAAATAGCACTTGCTGCGGATGATCCCTTTAGTTTCTGTAGTAACAAGCCTCACCTCCCAGGCTTGTCTAATAAGCAGCTAAGTTTGCTGCATATTTGACCTTGTACGTGGTTATGACCCTCGAGGGAGCTAATGAAGTGGATATATGGTCGATCAGCTAATTCCATCTGGAATTGTCACGGTACAGGCTACAAATGGTCCCATTTCCAGATAAACGCGGAAGCAGGAAGGGGAGAGGAAAAGATCGCTATCCCAGCATTTGGTTGTGATGTCACTGCTCCAGAATCTTTACTAGTACGACTATGGACCTATGGTGGATTTTGTTGTTTGTCCGATGGTCCTGGAATTTGTTTTGAGCTAATTGTTGAATTTTAAAAAGCAAAGCTACCAGGTTGCATCTAATTATGATTTCGGGAGCACTAGGCATCGTCGTATTGTATCGACTTATCGTTATTGGACCCAGGACTGGTACCTTTTACTGGACAATTTCAGAATTCTACTAAGCGGCGGAGCTTCCGGTATGGTTAGATTTTGTCAGTGAGCATATGTACAATTAAAGTCTAATCACTAATGAATATACTAATCACTGTGTTTTTACCGATGCACCTACTATTAAATAGTATCTTTTAG
More
|
||||||||||
| CDS seq | ATGGAGTGGGCGTACTACGGCAGTGGGTACTCCTCGTCGGGGACGCCGTCGCCGGTGGGCGGCGACGGGGACGAGGACTCGTACATGACGGTGTCGTCGGCGCCGCCCAAGCGGCGGGCGGGGAGGACCAAGTTCAAGGAGACGAGGCACCCGGTGTACAAGGGCGTGCGCAGCAGGAACCCCGGGAGGTGGGTCTGCGAGGTGCGCGAGCCGCACGGCAAGCAGAGGATCTGGCTCGGCACCTTCGAGACCGCCGAGATGGCGGCGCGCGCGCACGACGTCGCGGCGATGGCGCTGCGCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCGCCGCGCAGGCTCCGCGTGCCGCCGCTGGGGGCCGGGCACGAGGAGATACGCCGCGCCGCGGTCGAGGCCGCCGAGCTGTTCCGCCCGGCGCCCGGGCAGCACAATGCGGCTGCCGAGGCGGCGGCCGCTGTCGCTGCGCAGGCAACCGCGGCGAGCGCGGAGCTCTTTGCCGACTTCCCTTGCTACCCGATGGACGGACTGGAATTCGAAATGCAGGGGTACCTCGACATGGCACAGGGAATGCTCATCGAGCCGCCGCCATTGGCAGGGCAATCGACGTGGGCCGAGGAGGACTACGACTGCGAGGTCAATCTATGGAGCTACTGA
More
|
||||||||||
| Protein seq | MEWAYYGSGYSSSGTPSPVGGDGDEDSYMTVSSAPPKRRAGRTKFKETRHPVYKGVRSRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAAMALRGRAACLNFADSPRRLRVPPLGAGHEEIRRAAVEAAELFRPAPGQHNAAAEAAAAVAAQATAASAELFADFPCYPMDGLEFEMQGYLDMAQGMLIEPPPLAGQSTWAEEDYDCEVNLWSY |
||||||||||
| Function | Dehydration-responsive element-binding protein 1E [UniProtKB/Swiss-Prot:Q8H273] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0451100 | OsMH63_04T0451100.1 | Chr04 | 30547362 | 30549059 | + | maker | ||
| CDS seq | ATGGAGTGGGCGTACTACGGCAGTGGGTACTCCTCGTCGGGGACGCCGTCGCCGGTGGGCGGCGACGGGGACGAGGACTCGTACATGACGGTGTCGTCGGCGCCGCCCAAGCGGCGGGCGGGGAGGACCAAGTTCAAGGAGACGAGGCACCCGGTGTACAAGGGCGTGCGCAGCAGGAACCCCGGGAGGTGGGTCTGCGAGGTGCGCGAGCCGCACGGCAAGCAGAGGATCTGGCTCGGCACCTTCGAGACCGCCGAGATGGCGGCGCGCGCGCACGACGTCGCGGCGATGGCGCTGCGCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCGCCGCGCAGGCTCCGCGTGCCGCCGCTGGGGGCCGGGCACGAGGAGATACGCCGCGCCGCGGTCGAGGCCGCCGAGCTGTTCCGCCCGGCGCCCGGGCAGCACAATGCGGCTGCCGAGGCGGCGGCCGCTGTCGCTGCGCAGGCAACCGCGGCGAGCGCGGAGCTCTTTGCCGACTTCCCTTGCTACCCGATGGACGGACTGGAATTCGAAATGCAGGGGTACCTCGACATGGCACAGGGAATGCTCATCGAGCCGCCGCCATTGGCAGGGCAATCGACGTGGGCCGAGGAGGACTACGACTGCGAGGTCAATCTATGGAGCTACTGA
More
|
|||||||
| Protein seq | MEWAYYGSGYSSSGTPSPVGGDGDEDSYMTVSSAPPKRRAGRTKFKETRHPVYKGVRSRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAAMALRGRAACLNFADSPRRLRVPPLGAGHEEIRRAAVEAAELFRPAPGQHNAAAEAAAAVAAQATAASAELFADFPCYPMDGLEFEMQGYLDMAQGMLIEPPPLAGQSTWAEEDYDCEVNLWSY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.5629295 | 24.082141 | 0.0234705 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0572400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g48350 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0572400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0023610 | RBH | 0.0 | 0.0 | 0.536474 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0024340 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0024070 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0023830 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0023960 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0448400 | RBH | 1.178997 | 32.4850675 | 0.252655 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022730 | RBH | 0.0 | 0.0 | 0.115492 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0455100 | RBH | 3.320178 | 5.215579 | 0.2524765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0023230 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0023060 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023180 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023580 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0023780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G023030 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0022920 | RBH | 0.0 | 0.0 | 0.696043 |
