Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0210200 | OGI:04042910 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:13678811-13681216 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGAAGAACAGTGCAAGGCTGAAGGAGCTTGGACTTCCTGATCGCTACACCCCAGTTTTGGAAGGCTATGTTGGTGTTCATTCTGACCAGAATCAAAGTGGAGATTCGGAGTCCGAGTATGATCCTTTAAAGGATGATACTGGTGAAGGAGATTTGATTGATGATGAGAATGCAAAGGTTGTAATTCCTTTATGTTGACAAGTCTTAACTTGTTATTTTTCTTCCTAATTCAATGTAATACTATGTTGACCAATCCATGCTTTTCTTTCCAGCAGTGCTCTAAGGAGAAGACTCGCAAGAACTGTAACAACAAAACTTCAAGCATCCAGACTGGTGGAGTCAAGTTTCGGTCTCGCAAGAGAGTTTATGCAGAGCAAATGACTCCTAAAGTTACAAGGTCAAAGAAAAGCATTGCCCAACAAGATGCAAGTCTCACACCAAGTGATATTTGTATGCCAGCTACATCACAAGCTAACGCTGGAGATCTCGATGGCAACTTAGATGACCACACACAGGCTGCTGTTGAAGGCCAGTTCTACTGCCACATTTCTTGGTTACATTCCATTAACATGAGTCAGCTATAAAAATGTTTAACTTGCTGATCTAAGTTTATTGCTTGTTTACCTTTTGAAAATATTAACTGAGTTTTAAGAATAAAAAAAATTAATGAAACCAATTTTCACATTTTTACTTGACAACACTCACATGACCACCGGGTCTGATGCTATCAACCAACATAATCAGCACAACCATATGGACAATGGAGGTGATGAATTCTTACTGTCGTTATGTAAGTTTTGTTTGTATGATGAATGCTTTTCTTACTTGCTGCCCTTTTTTAGATGGCTTCACCCAGCATGATGACAACACCCTTGTGGCTGATGTAGTTGATGGCATTACTCAACACGGTGACCACAACCAGATTACCAACGAAGGTGAGTTTGTTCATCTATTTTCCATATTTCATATTGTCTCAGTTGATCAATATTTGTATGCAAAGCTTTCAATTCATGATCATCTTGGATCAATGTTTGCTTCACCTCAATAATTTTAGTTTTAATTTCAACTGCAATGTACATTTACAACTAGGGGGAGTGGAGAGAAGGGACCGGGGAAATAATATGGGACGTGGTCTCCAAAGGTTAAACCGAGCGTGCCGTGGCAAGCTGCAAGTTGTCATAACTGAAGGGAATATAAGGCCAGTGGTTCCTCTTGTTGCTGCAAAGTTTGCAACTGAATGCAACATCATAGTTAGGAACCATGTGCCTATACTCCCGCATTGGAAGCTATACAAGGAAAAACCTGCATCTGCGTACGTTAATCTGTTCTTAGGAAAACTAAAGGTACATGCATTCTCTGGTCCTTTCCACATTTAGTCTCAATAGAAGATCCATTGTTTGTTATTTTAAGCCATAAATTACTGAATTGATATTCTTTTCTATAAATGTTCTTCCATTCGATTAGGCCAAGTTTGACATAAACATAGAGGATGATACAGTTAAAATGGCTTGTACTGAGATGATGAAGTCCGCAGTTCACCAACAAAGATACAGGCTGAAGCAAAAATATTTTGATCCTTTTCCACTACATTTGGTTACAAAAACTTCTCCTGTCAAATTCATGAGTAATGAACAGTGGACTCAACTCCTAGAATCATGGAAGAGTCCCCAAAAGATGGTATGTTCTCTCTGCAAAACCAGATTGATGCCTTGTGCATGCTAATCTATCACCAACCTTACATGTATTGTTGTCTTTAATGTAGGAGATGTGTCAAAAGAACAAAGAAAACCGAGGGAATGTTAAGTACCATCACACAACCGGATCTCGTGCCTACATGGTTCATGTTGAAAATTTGGTAAGTGGGCCATTTTAAGCACCATATAACTTTTTGTATGAACAAGCTACTGCTTAAATACGTCTGCCTCAGCCTAAACAAGATGATGTCCATGCTCATGTTGTTATGTTCATGAGAGTCCATTAGTTTGTGGAATGTTCAAGGACACTATATCTGATCCGATGCCAATACATTGTGTGAAAGGTGACGAGTTAGGTTTCCATCTATGTCTAAGTTGAGTGTGTTAATAGATTAAAAGTTATTGTTTTTATGTTTGTGTATGCAGTGAAAGACCTCTGTTGCAGTTGTTTGTCTAAGTGGAAAACATAGTGTGACTGTGTGCAACAAATGAGGCTAGAAATTAGTTGAACATGTTCTTTTAGATTCTCAATTGAACAGTAGCTGCCCAGATTTTCGTAACATCTTAATTCATGCTGGACCTAATGCATATATGTTGTTCTCAGGATGACAAATACAATGATGAAGAACCTAATGCATTTGATTTGTTCAAGGAGTTCCACTACAGCAAGAAAAAAAATGCTACACCCCTGTTGTACATGAGGCTATTGTAA
More
|
||||||||||
| CDS seq | ATGAAGAACAGTGCAAGGCTGAAGGAGCTTGGACTTCCTGATCGCTACACCCCAGTTTTGGAAGGCTATGTTGGTGTTCATTCTGACCAGAATCAAAGTGGAGATTCGGAGTCCGAGTATGATCCTTTAAAGGATGATACTGGTGAAGGAGATTTGATTGATGATGAGAATGCAAAGCAGTGCTCTAAGGAGAAGACTCGCAAGAACTGTAACAACAAAACTTCAAGCATCCAGACTGGTGGAGTCAAGTTTCGGTCTCGCAAGAGAGTTTATGCAGAGCAAATGACTCCTAAAGTTACAAGGTCAAAGAAAAGCATTGCCCAACAAGATGCAAGTCTCACACCAAGTGATATTTATGGCTTCACCCAGCATGATGACAACACCCTTGTGGCTGATGTAGTTGATGGCATTACTCAACACGGTGACCACAACCAGATTACCAACGAAGGGGGAGTGGAGAGAAGGGACCGGGGAAATAATATGGGACGTGGTCTCCAAAGGTTAAACCGAGCGTGCCGTGGCAAGCTGCAAGTTGTCATAACTGAAGGGAATATAAGGCCAGTGGTTCCTCTTGTTGCTGCAAAGTTTGCAACTGAATGCAACATCATAGTTAGGAACCATGTGCCTATACTCCCGCATTGGAAGCTATACAAGGAAAAACCTGCATCTGCGTACGTTAATCTGTTCTTAGGAAAACTAAAGGCCAAGTTTGACATAAACATAGAGGATGATACAGTTAAAATGGCTTGTACTGAGATGATGAAGTCCGCAGTTCACCAACAAAGATACAGGCTGAAGCAAAAATATTTTGATCCTTTTCCACTACATTTGGTTACAAAAACTTCTCCTGTCAAATTCATGAGTAATGAACAGTGGACTCAACTCCTAGAATCATGGAAGAGTCCCCAAAAGATGGAGATGTGTCAAAAGAACAAAGAAAACCGAGGGAATGTTAAGTACCATCACACAACCGGATCTCGTGCCTACATGGTTCATGTTGAAAATTTGGATGACAAATACAATGATGAAGAACCTAATGCATTTGATTTGTTCAAGGAGTTCCACTACAGCAAGAAAAAAAATGCTACACCCCTGTTGTACATGAGGCTATTGTAA
More
|
||||||||||
| Protein seq | MKNSARLKELGLPDRYTPVLEGYVGVHSDQNQSGDSESEYDPLKDDTGEGDLIDDENAKQCSKEKTRKNCNNKTSSIQTGGVKFRSRKRVYAEQMTPKVTRSKKSIAQQDASLTPSDIYGFTQHDDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACRGKLQVVITEGNIRPVVPLVAAKFATECNIIVRNHVPILPHWKLYKEKPASAYVNLFLGKLKAKFDINIEDDTVKMACTEMMKSAVHQQRYRLKQKYFDPFPLHLVTKTSPVKFMSNEQWTQLLESWKSPQKMEMCQKNKENRGNVKYHHTTGSRAYMVHVENLDDKYNDEEPNAFDLFKEFHYSKKKNATPLLYMRLL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0210200 | OsMH63_04T0210200-mRNA-1 | Chr04 | 13678811 | 13681216 | + | maker | ||
| CDS seq | ATGAAGAACAGTGCAAGGCTGAAGGAGCTTGGACTTCCTGATCGCTACACCCCAGTTTTGGAAGGCTATGTTGGTGTTCATTCTGACCAGAATCAAAGTGGAGATTCGGAGTCCGAGTATGATCCTTTAAAGGATGATACTGGTGAAGGAGATTTGATTGATGATGAGAATGCAAAGCAGTGCTCTAAGGAGAAGACTCGCAAGAACTGTAACAACAAAACTTCAAGCATCCAGACTGGTGGAGTCAAGTTTCGGTCTCGCAAGAGAGTTTATGCAGAGCAAATGACTCCTAAAGTTACAAGGTCAAAGAAAAGCATTGCCCAACAAGATGCAAGTCTCACACCAAGTGATATTTATGGCTTCACCCAGCATGATGACAACACCCTTGTGGCTGATGTAGTTGATGGCATTACTCAACACGGTGACCACAACCAGATTACCAACGAAGGGGGAGTGGAGAGAAGGGACCGGGGAAATAATATGGGACGTGGTCTCCAAAGGTTAAACCGAGCGTGCCGTGGCAAGCTGCAAGTTGTCATAACTGAAGGGAATATAAGGCCAGTGGTTCCTCTTGTTGCTGCAAAGTTTGCAACTGAATGCAACATCATAGTTAGGAACCATGTGCCTATACTCCCGCATTGGAAGCTATACAAGGAAAAACCTGCATCTGCGTACGTTAATCTGTTCTTAGGAAAACTAAAGGCCAAGTTTGACATAAACATAGAGGATGATACAGTTAAAATGGCTTGTACTGAGATGATGAAGTCCGCAGTTCACCAACAAAGATACAGGCTGAAGCAAAAATATTTTGATCCTTTTCCACTACATTTGGTTACAAAAACTTCTCCTGTCAAATTCATGAGTAATGAACAGTGGACTCAACTCCTAGAATCATGGAAGAGTCCCCAAAAGATGGAGATGTGTCAAAAGAACAAAGAAAACCGAGGGAATGTTAAGTACCATCACACAACCGGATCTCGTGCCTACATGGTTCATGTTGAAAATTTGGATGACAAATACAATGATGAAGAACCTAATGCATTTGATTTGTTCAAGGAGTTCCACTACAGCAAGAAAAAAAATGCTACACCCCTGTTGTACATGAGGCTATTGTAA
More
|
|||||||
| Protein seq | MKNSARLKELGLPDRYTPVLEGYVGVHSDQNQSGDSESEYDPLKDDTGEGDLIDDENAKQCSKEKTRKNCNNKTSSIQTGGVKFRSRKRVYAEQMTPKVTRSKKSIAQQDASLTPSDIYGFTQHDDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACRGKLQVVITEGNIRPVVPLVAAKFATECNIIVRNHVPILPHWKLYKEKPASAYVNLFLGKLKAKFDINIEDDTVKMACTEMMKSAVHQQRYRLKQKYFDPFPLHLVTKTSPVKFMSNEQWTQLLESWKSPQKMEMCQKNKENRGNVKYHHTTGSRAYMVHVENLDDKYNDEEPNAFDLFKEFHYSKKKNATPLLYMRLL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0240600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g37230 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0240600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0022810 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0406400 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0304500 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
