Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0184700 | OGI:04038590 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:12248416-12253609 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GATGAGGAAAATATAGAATGTAAGAGGATATTAAGCATAGAAAATAGGTCCGGACATATCTGTTTTAGCACAAATGAATCGGAATTTTTCAGTTTTGGACCATAGCATGTACAGTCAGCAAAGTGTTGACAATTCCATGCCAAAGCATGTTTTACCACCTTTACATGTTCGGATCACCATGGTACGCTATCATGGGAATTGGTACGTTCTCATTCCTTCCATGTTGAACAATCTCAGAGCGACATAGAAGCCAAATGTAGCTCAGACAAAAACTTTCTATAGGCTTGTGCAACTAAGTTTAATGCTTATACATGGCAGATGCCCTTATCTTGCAAATTCAATGCCCATAGATGTCTTCCTGCTGTCATACTCCATTGTTTCAACAGGAGAATAACACGGCTCTGAGATGCTACCACTTGAGTTTCCCAATAATCTGAGTGAGCGAATACCCTGAAGTGTGCCAGTGTGTTGTTGTGACGCCGTATCTGCCAATTGCCGAAGTATGTCTGCCACATGGCTCATTGCTGGCCTGTTCTCACTGTCCATAACTAAGCACTGGCTTGCTAGACATGCGAATTCGTGTAGCAGTTCCATGTTATCCTCATGTAGTATTTCTTTATCTATGTGATGATCAATGTTTCCCTTCTTCATAGCATCTTGGAAGAGAGAGGCGAGGCTCACCTCATTGGATAGAGGCTTCCTACGTGTCAAGAGCTCTAGAAGAAGAATGCCAAAGCTGTAGACATCACTCTTATCAGTCAACTGGAACGTCATGAGGTATTCTGGATCTAGATAACCAATTGTTCCCTTCACTACATTAATATTTTCATCAGCCGCTGCCCTAAATATTGAGCACCCAAAATCAGAAACTTTTGCAGTAAATTTGTCACCAATAAGTATGTTGGCAGATTTCACATCCCCATGAAAAATAGGATGATCAAGTGAATGTAGGTATGCAAGTGCTTCAGCAGACTGGGCAGCGATTTCCAGTCGGATATCTAGTGTTCTAGTGGATGCATCGCTTTGGCCATGAATCAAATAGTGTAGGGTCTTATTCGGCACAAATTCATATACTAGAACAGGAACTTCAAACTGCAGACAACAACCAAGAAGTTTGACAATGTACTCATGTCTCACTCGGGAGAGTATGAGCAACTCTTGTCCGAATTCCATCCTCCTATTCGCATCGATTCCCTTGCATCTCTTTATTGCCACAGGATTGTTTTCTGGATCTAGATCAAAACCTTTGTAAACAGTACCCTGACCGCCCTGACCGAGGATTGCGCTCTCCCTGAAATTGTTTGTTGCTAACTCAATTTCTTCTCTGTCATACAACTTAAATGAAACTTGATTCTCTAATTTCATCATATCAAGTAATAATTGGCCTCCATGTTGACGAAAATATGCATCCCTTTTATTCATGAGATCTTGTCTAACCAATCGACGTTTATACTTGATCCATTCTATGCCAAGGAAAATTAGAAGGCCAACAACCGTTGAGGAACAAATTCCTGATTTTTTTAGATCAAATTAGTAAATTAAGTAAGCATCTTCATATATATACAAACACACAAAACATAATTGTAATGCATTTATACCTATAGCCAACAGTACTCCATGTGTTAGCACTTTCTGACACTGTCCAACTGAGGCATTGCCTCGGGTACCCGCAGGACAAATACATTCGAACCCACCAAGAGTATTACGACAAATCCCGTGGCAATTGTTATTCATGTTCTGATCCGTGCACTCATCAATATCTACAATTAGTCATTAAACAGAGAGAGAGAGAGTTTAAGTGAAAAATATATCATAGCAAATATAGAAACCAAAACAAACATGTATAGACTAACACTTTCATGGTAGCAGTTACTCCCTGTAGCCCTAAATAAGTGTAGTTTTAGCCACTTAAGAGAACCACATGAAAAAATATGCTCATCTTTTCATGCCGTGATCCGTCTGCGTAAATAGATTTTTAGACCGCATATGAAAATGAGCCTCGATTTTTAAAGGCACGATCATTTACGGTCCGCCTACAACTTATATAGGTCCTCTTATAGAAAAATAATTATCTAGTAGTTGTTAACAAACAAATTTGGTAGCATCTATGTCAGGAAAGAGGATTTGATCAAAGCGGAGTTGGAGGCGGAGATCGAGTTCGGAAACAAAGCAGGAATCGGCTGGAGTTCAGATCGGCTACGGTTAGGATCGGCTGAGTCTGAGTCAAGCTAAATAAGCCGATATAGCCGATTCCAACAATACGACTTGTGCGCGACATCGGGTCCAAGTTAGTGTACTGTCAACAGTAGTGAAAGGTATATTAGTCTTTTAACCTTTTTCTTAATATGTGTTTGACTAGTTCAAACTGCACTTCTTTAGAGTAGGAGGAAGCAGTACTACTAAAAACAAAGATATATATATATATATATATATATATCGACATTCTCTTCACAAGAGATCCAAACTAATGCCTGATTCAGTTTCCCAAAAATTTTTCCCAAAAACATCACATCGAATCTTTGGACACATGCATGAACCATTAAATAAGATTAAAAGAAAAACTAATTGCACAGTTAGGGGGGAAATCGCGAGACGAATCTTTTGAGCCTAATTAGTCTATGATTAGCCATAAGTGCTACAGTAACCCACATATCCTAATAACGGATTAATTAGGCTCAAAAGATTTGTCTCGCGGTTTTCAGGCGAGTTATGAAATTAGTTTTTTTATTTATGTCCGAAACCCCTTCCGATATCCAGTCAAATATCCGATGTGACACCAAAAAAATTTTCTTTTCGCTAACTAAATAGACCCTAATTGGGTGAACGAGACAATGGAACTTTTTTTGAAAGGTCCGTTTAATTTGAACCAAATCAAATAGATTGTGCGTCTACAATGTGTAGCTAAATAATACTATGTAAAATCTATTTAGAGAGGTATCTCGATTTTGCCTTAACTAGTGACGCCAACATAGAGAAACGTGGAGAAGTCCAGCTACTACATGGTAATACATGCATGCATTTTTTTTAATATACATGTACGTCCTTTTCCTCTTCAAACAAAGTTTTCTCTCAAATTACTTATCCGATCTACAATCTGATTACACCATTGTGTTCGTTACAATTAAATCTTCACAACAAGATCTTACATGATTATATTACGATGAAAAAATATTTATATTTGTAAATTACTTTTATTATATATATAAGTTACTTTTATCATATATATAAGTTACTTTTAGAGTTGACTAAATTACTTCTTAGACATATAAAAGTAAATTTAATAGAGTCTAAAAGTAATTTAAATATATTATAAAAGTAACTTAAAACAAAACGGAAGTAATTTTGTCACGACATTAGAAGTAAATTCGTCGTAGGGATAAAAATATGACTTTATCTAGAAATTAAATTTAATCAGCACAGATCAACACACATAAGTTTAACATTTTTTAAAAGTAATTTCAATGTTAATTGGAAGTAACTTTTGCATGGTTCAAAAGTAGCTCTCTATAAATCTGTTTAATCATCGATTGTCTTTTTCTTTCATTTTTGTTTTTCATATAGAATGAGAAAAGAAGATACTATTGTATTTTTCAAGTTGAAAGGAGATACTAGATGGAGTACAAACTAGCTGTGTAGTCACATCCAATTAAAAAAGACATTCATTAAAGTTACTTTCTTTTGGTTATAAGTTACTTCTATAATATATGCAAATTACTTTTAGGCTTCATTGAATTTACTTTTACATGTATAAGAAGTAATTTAGTGAAATTTGAAAGTAATTTAGATATATTATAAAAGTAATTTATAATTTTTTATCAAAATATAATCATGTGTGATCTTGTTTTAAAGATTTAATTGTTACAAACATAATGGTGCAATCGGATCGTAAATTGGATGAGTAGTTTAAGAGAAAATTGTATTTGAAATATAGGTTGATAATGTCTCTCATAGATGAACTGGTAGCTGGTTTAGACAAACTAGCTACCACTAGCTGTGTAGTCACGTCCATAATACTAAGGTGTCCTTTTAACAAAATCAAATACTACAAATAAGAAACACCATAAGTCTAAATTAATTAATTGCTCTGATCCTCAATTAAAACCTAATAATACTCTGTTTGTTGTTTGATTATTACCTAATTAATCCTATCTTACTGTCCAAACTAACTAACACAGCAACTATTTTAATTCCTCAATCAAGAAAAGGGAACATTCACCTTGGCAACTGCTGGGATCTTCTGGGTGCAGGTAAGGATTTCCACGGAATCCCTTGGAACAATTGCAGATGTAGCCTAGCCCGCTTGGCGAGTCAAAGCACTCACTGTTTCTGCTCCTGCACGCATAGGACTCGGGACTCGCTCGCCTCGCCTGCTCGCAGGTCTCGTTTCCGATGGCCCAATCAAGCAGCAAGGGGACCTGCCCGTTGAAGGTGTCGTTGAACGCCGACGAGGTGACGTACTCCGGGGTGAACCTGAACCACGACGCCGACGACTTCTCCATGAGCGCCGCGTAGCTGCAGCGGCTCACGTTGTGGATGGCCGTCGTGTTGAAGCGGTCGTCGAACCAGACGTAGTAGTACTGGAGCCCCACGGGGATGGACGTCCGGCAGCATCCGATGCCGGAGCAGGCGCCGACGTCGTCGTCGGTGACGGTGAGGTTGCCGGCCTGCAGCCGGCACGTGGCCACGCACCCGGTGGTCAGGCTGCCGACGTCGGCGTCCACGTTGTCGCCGCCGATGTAGGCGAGCGTGCGGCACCCGATGGCGGTGAACACGTTGCCGGTGTGGGAGAACCTGTACGGCGACGAGGTGAAGTCGAGCGCCCAGGTGTTGTTTTCGGGACCGTCCATGGCGCCGGTGGCCGGGTTGTAGCAGTAGGAGGAGATGCTCATCAGGATCCTGGCCTGGCCTTCCGGCAGCAAGACGCCGAGCAGCTCGACGTCCCAGATGAAGGGCTTGTACACGCCGTTGCCGGTGTCGTTGCAGCTGATGTTGAAGCCGTAGGTGCCGTGGCCCAGGGCGCAGCCGGGGGCATCGCCGTTGAGGCCGAACGGGTAAGGGATGTCGACGTCGCCGCATCTTCTCCGGCAGGCCGGCGGCGGCTGTGGTTGCGCGACGGCGAAGGAGAGCCATGCCGTAGTTGCTACGGCGCCTAGGAGGCATAGCAGAGCCGTTTTCGTGTGGATCGTCATTATTC
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| CDS seq | ATGACGATCCACACGAAAACGGCTCTGCTATGCCTCCTAGGCGCCGTAGCAACTACGGCATGGCTCTCCTTCGCCGTCGCGCAACCACAGCCGCCGCCGGCCTGCCGGAGAAGATGCGGCGACGTCGACATCCCTTACCCGTTCGGCCTCAACGGCGATGCCCCCGGCTGCGCCCTGGGCCACGGCACCTACGGCTTCAACATCAGCTGCAACGACACCGGCAACGGCGTGTACAAGCCCTTCATCTGGGACGTCGAGCTGCTCGGCGTCTTGCTGCCGGAAGGCCAGGCCAGGATCCTGATGAGCATCTCCTCCTACTGCTACAACCCGGCCACCGGCGCCATGGACGGTCCCGAAAACAACACCTGGGCGCTCGACTTCACCTCGTCGCCGTACAGGTTCTCCCACACCGGCAACGTGTTCACCGCCATCGGGTGCCGCACGCTCGCCTACATCGGCGGCGACAACGTGGACGCCGACGTCGGCAGCCTGACCACCGGGTGCGTGGCCACGTGCCGGCTGCAGGCCGGCAACCTCACCGTCACCGACGACGACGTCGGCGCCTGCTCCGGCATCGGATGCTGCCGGACGTCCATCCCCGTGGGGCTCCAGTACTACTACGTCTGGTTCGACGACCGCTTCAACACGACGGCCATCCACAACGTGAGCCGCTGCAGCTACGCGGCGCTCATGGAGAAGTCGTCGGCGTCGTGGTTCAGGTTCACCCCGGAGTACGTCACCTCGTCGGCGTTCAACGACACCTTCAACGGGCAGGTCCCCTTGCTGCTTGATTGGGCCATCGGAAACGAGACCTGCGAGCAGGCGAGGCGAGCGAGTCCCGAGTCCTATGCGTGCAGGAGCAGAAACAGTGAGTGCTTTGACTCGCCAAGCGGGCTAGGCTACATCTGCAATTGTTCCAAGGGATTCCGTGGAAATCCTTACCTGCACCCAGAAGATCCCAGCAGTTGCCAAGATATTGATGAGTGCACGGATCAGAACATGAATAACAATTGCCACGGGATTTGTCGTAATACTCTTGGTGGGTTCGAATGTATTTGTCCTGCGGGTACCCGAGGCAATGCCTCAGTTGGACAGTGTCAGAAAGTGCTAACACATGGAGTACTGTTGGCTATAGGAATTTGTTCCTCAACGGTTGTTGGCCTTCTAATTTTCCTTGGCATAGAATGGATCAAGTATAAACGTCGATTGGTTAGACAAGATCTCATGAATAAAAGGGATGCATATTTTCGTCAACATGGAGGCCAATTATTACTTGATATGATGAAATTAGAGAATCAAGTTTCATTTAAGTTGTATGACAGAGAAGAAATTGAGTTAGCAACAAACAATTTCAGGGAGAGCGCAATCCTCGGTCAGGGCGGTCAGGGTACTGTTTACAAAGGTTTTGATCTAGATCCAGAAAACAATCCTGTGGCAATAAAGAGATGCAAGGGAATCGATGCGAATAGGAGGATGGAATTCGGACAAGAGTTGCTCATACTCTCCCGAGTGAGACATGAGTACATTGTCAAACTTCTTGGTTGTTGTCTGCAGTTTGAAGTTCCTGTTCTAGTATATGAATTTGTGCCGAATAAGACCCTACACTATTTGATTCATGGCCAAAGCGATGCATCCACTAGAACACTAGATATCCGACTGGAAATCGCTGCCCAGTCTGCTGAAGCACTTGCATACCTACATTCACTTGATCATCCTATTTTTCATGGGGATGTGAAATCTGCCAACATACTTATTGGTGACAAATTTACTGCAAAAGTTTCTGATTTTGGGTGCTCAATATTTAGGGCAGCGGCTGATGAAAATATTAATGTAGTGAAGGGAACAATTGGTTATCTAGATCCAGAATACCTCATGACGTTCCAGTTGACTGATAAGAGTGATGTCTACAGCTTTGGCATTCTTCTTCTAGAGCTCTTGACACGTAGGAAGCCTCTATCCAATGAGGTGAGCCTCGCCTCTCTCTTCCAAGATGCTATGAAGAAGGGAAACATTGATCATCACATAGATAAAGAAATACTACATGAGGATAACATGGAACTGCTACACGAATTCGCATGTCTAGCAAGCCAGTGCTTAGTTATGGACAGTGAGAACAGGCCAGCAATGAGCCATGTGGCAGACATACTTCGGCAATTGGCAGATACGGCGTCACAACAACACACTGGCACACTTCAGGGTATTCGCTCACTCAGATTATTGGGAAACTCAAGTGGTAGCATCTCAGAGCCGTGTTATTCTCCTGTTGAAACAATGGAGTATGACAGCAGGAAGACATCTATGGGCATTGAATTTGCAAGATAA
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| Protein seq | MTIHTKTALLCLLGAVATTAWLSFAVAQPQPPPACRRRCGDVDIPYPFGLNGDAPGCALGHGTYGFNISCNDTGNGVYKPFIWDVELLGVLLPEGQARILMSISSYCYNPATGAMDGPENNTWALDFTSSPYRFSHTGNVFTAIGCRTLAYIGGDNVDADVGSLTTGCVATCRLQAGNLTVTDDDVGACSGIGCCRTSIPVGLQYYYVWFDDRFNTTAIHNVSRCSYAALMEKSSASWFRFTPEYVTSSAFNDTFNGQVPLLLDWAIGNETCEQARRASPESYACRSRNSECFDSPSGLGYICNCSKGFRGNPYLHPEDPSSCQDIDECTDQNMNNNCHGICRNTLGGFECICPAGTRGNASVGQCQKVLTHGVLLAIGICSSTVVGLLIFLGIEWIKYKRRLVRQDLMNKRDAYFRQHGGQLLLDMMKLENQVSFKLYDREEIELATNNFRESAILGQGGQGTVYKGFDLDPENNPVAIKRCKGIDANRRMEFGQELLILSRVRHEYIVKLLGCCLQFEVPVLVYEFVPNKTLHYLIHGQSDASTRTLDIRLEIAAQSAEALAYLHSLDHPIFHGDVKSANILIGDKFTAKVSDFGCSIFRAAADENINVVKGTIGYLDPEYLMTFQLTDKSDVYSFGILLLELLTRRKPLSNEVSLASLFQDAMKKGNIDHHIDKEILHEDNMELLHEFACLASQCLVMDSENRPAMSHVADILRQLADTASQQHTGTLQGIRSLRLLGNSSGSISEPCYSPVETMEYDSRKTSMGIEFAR |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0184700 | OsMH63_04T0184700-mRNA-1 | Chr04 | 12248416 | 12253609 | - | maker | ||
| CDS seq | ATGACGATCCACACGAAAACGGCTCTGCTATGCCTCCTAGGCGCCGTAGCAACTACGGCATGGCTCTCCTTCGCCGTCGCGCAACCACAGCCGCCGCCGGCCTGCCGGAGAAGATGCGGCGACGTCGACATCCCTTACCCGTTCGGCCTCAACGGCGATGCCCCCGGCTGCGCCCTGGGCCACGGCACCTACGGCTTCAACATCAGCTGCAACGACACCGGCAACGGCGTGTACAAGCCCTTCATCTGGGACGTCGAGCTGCTCGGCGTCTTGCTGCCGGAAGGCCAGGCCAGGATCCTGATGAGCATCTCCTCCTACTGCTACAACCCGGCCACCGGCGCCATGGACGGTCCCGAAAACAACACCTGGGCGCTCGACTTCACCTCGTCGCCGTACAGGTTCTCCCACACCGGCAACGTGTTCACCGCCATCGGGTGCCGCACGCTCGCCTACATCGGCGGCGACAACGTGGACGCCGACGTCGGCAGCCTGACCACCGGGTGCGTGGCCACGTGCCGGCTGCAGGCCGGCAACCTCACCGTCACCGACGACGACGTCGGCGCCTGCTCCGGCATCGGATGCTGCCGGACGTCCATCCCCGTGGGGCTCCAGTACTACTACGTCTGGTTCGACGACCGCTTCAACACGACGGCCATCCACAACGTGAGCCGCTGCAGCTACGCGGCGCTCATGGAGAAGTCGTCGGCGTCGTGGTTCAGGTTCACCCCGGAGTACGTCACCTCGTCGGCGTTCAACGACACCTTCAACGGGCAGGTCCCCTTGCTGCTTGATTGGGCCATCGGAAACGAGACCTGCGAGCAGGCGAGGCGAGCGAGTCCCGAGTCCTATGCGTGCAGGAGCAGAAACAGTGAGTGCTTTGACTCGCCAAGCGGGCTAGGCTACATCTGCAATTGTTCCAAGGGATTCCGTGGAAATCCTTACCTGCACCCAGAAGATCCCAGCAGTTGCCAAGATATTGATGAGTGCACGGATCAGAACATGAATAACAATTGCCACGGGATTTGTCGTAATACTCTTGGTGGGTTCGAATGTATTTGTCCTGCGGGTACCCGAGGCAATGCCTCAGTTGGACAGTGTCAGAAAGTGCTAACACATGGAGTACTGTTGGCTATAGGAATTTGTTCCTCAACGGTTGTTGGCCTTCTAATTTTCCTTGGCATAGAATGGATCAAGTATAAACGTCGATTGGTTAGACAAGATCTCATGAATAAAAGGGATGCATATTTTCGTCAACATGGAGGCCAATTATTACTTGATATGATGAAATTAGAGAATCAAGTTTCATTTAAGTTGTATGACAGAGAAGAAATTGAGTTAGCAACAAACAATTTCAGGGAGAGCGCAATCCTCGGTCAGGGCGGTCAGGGTACTGTTTACAAAGGTTTTGATCTAGATCCAGAAAACAATCCTGTGGCAATAAAGAGATGCAAGGGAATCGATGCGAATAGGAGGATGGAATTCGGACAAGAGTTGCTCATACTCTCCCGAGTGAGACATGAGTACATTGTCAAACTTCTTGGTTGTTGTCTGCAGTTTGAAGTTCCTGTTCTAGTATATGAATTTGTGCCGAATAAGACCCTACACTATTTGATTCATGGCCAAAGCGATGCATCCACTAGAACACTAGATATCCGACTGGAAATCGCTGCCCAGTCTGCTGAAGCACTTGCATACCTACATTCACTTGATCATCCTATTTTTCATGGGGATGTGAAATCTGCCAACATACTTATTGGTGACAAATTTACTGCAAAAGTTTCTGATTTTGGGTGCTCAATATTTAGGGCAGCGGCTGATGAAAATATTAATGTAGTGAAGGGAACAATTGGTTATCTAGATCCAGAATACCTCATGACGTTCCAGTTGACTGATAAGAGTGATGTCTACAGCTTTGGCATTCTTCTTCTAGAGCTCTTGACACGTAGGAAGCCTCTATCCAATGAGGTGAGCCTCGCCTCTCTCTTCCAAGATGCTATGAAGAAGGGAAACATTGATCATCACATAGATAAAGAAATACTACATGAGGATAACATGGAACTGCTACACGAATTCGCATGTCTAGCAAGCCAGTGCTTAGTTATGGACAGTGAGAACAGGCCAGCAATGAGCCATGTGGCAGACATACTTCGGCAATTGGCAGATACGGCGTCACAACAACACACTGGCACACTTCAGGGTATTCGCTCACTCAGATTATTGGGAAACTCAAGTGGTAGCATCTCAGAGCCGTGTTATTCTCCTGTTGAAACAATGGAGTATGACAGCAGGAAGACATCTATGGGCATTGAATTTGCAAGATAA
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| Protein seq | MTIHTKTALLCLLGAVATTAWLSFAVAQPQPPPACRRRCGDVDIPYPFGLNGDAPGCALGHGTYGFNISCNDTGNGVYKPFIWDVELLGVLLPEGQARILMSISSYCYNPATGAMDGPENNTWALDFTSSPYRFSHTGNVFTAIGCRTLAYIGGDNVDADVGSLTTGCVATCRLQAGNLTVTDDDVGACSGIGCCRTSIPVGLQYYYVWFDDRFNTTAIHNVSRCSYAALMEKSSASWFRFTPEYVTSSAFNDTFNGQVPLLLDWAIGNETCEQARRASPESYACRSRNSECFDSPSGLGYICNCSKGFRGNPYLHPEDPSSCQDIDECTDQNMNNNCHGICRNTLGGFECICPAGTRGNASVGQCQKVLTHGVLLAIGICSSTVVGLLIFLGIEWIKYKRRLVRQDLMNKRDAYFRQHGGQLLLDMMKLENQVSFKLYDREEIELATNNFRESAILGQGGQGTVYKGFDLDPENNPVAIKRCKGIDANRRMEFGQELLILSRVRHEYIVKLLGCCLQFEVPVLVYEFVPNKTLHYLIHGQSDASTRTLDIRLEIAAQSAEALAYLHSLDHPIFHGDVKSANILIGDKFTAKVSDFGCSIFRAAADENINVVKGTIGYLDPEYLMTFQLTDKSDVYSFGILLLELLTRRKPLSNEVSLASLFQDAMKKGNIDHHIDKEILHEDNMELLHEFACLASQCLVMDSENRPAMSHVADILRQLADTASQQHTGTLQGIRSLRLLGNSSGSISEPCYSPVETMEYDSRKTSMGIEFAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0184700 | OsMH63_04T0184700-mRNA-2 | Chr04 | 12248416 | 12253609 | - | maker | ||
| CDS seq | ATGACGATCCACACGAAAACGGCTCTGCTATGCCTCCTAGGCGCCGTAGCAACTACGGCATGGCTCTCCTTCGCCGTCGCGCAACCACAGCCGCCGCCGGCCTGCCGGAGAAGATGCGGCGACGTCGACATCCCTTACCCGTTCGGCCTCAACGGCGATGCCCCCGGCTGCGCCCTGGGCCACGGCACCTACGGCTTCAACATCAGCTGCAACGACACCGGCAACGGCGTGTACAAGCCCTTCATCTGGGACGTCGAGCTGCTCGGCGTCTTGCTGCCGGAAGGCCAGGCCAGGATCCTGATGAGCATCTCCTCCTACTGCTACAACCCGGCCACCGGCGCCATGGACGGTCCCGAAAACAACACCTGGGCGCTCGACTTCACCTCGTCGCCGTACAGGTTCTCCCACACCGGCAACGTGTTCACCGCCATCGGGTGCCGCACGCTCGCCTACATCGGCGGCGACAACGTGGACGCCGACGTCGGCAGCCTGACCACCGGGTGCGTGGCCACGTGCCGGCTGCAGGCCGGCAACCTCACCGTCACCGACGACGACGTCGGCGCCTGCTCCGGCATCGGATGCTGCCGGACGTCCATCCCCGTGGGGCTCCAGTACTACTACGTCTGGTTCGACGACCGCTTCAACACGACGGCCATCCACAACGTGAGCCGCTGCAGCTACGCGGCGCTCATGGAGAAGTCGTCGGCGTCGTGGTTCAGGTTCACCCCGGAGTACGTCACCTCGTCGGCGTTCAACGACACCTTCAACGGGCAGGTCCCCTTGCTGCTTGATTGGGCCATCGGAAACGAGACCTGCGAGCAGGCGAGGCGAGCGAGTCCCGAGTCCTATGCGTGCAGGAGCAGAAACAGTGAGTGCTTTGACTCGCCAAGCGGGCTAGGCTACATCTGCAATTGTTCCAAGGGATTCCGTGGAAATCCTTACCTGCACCCAGAAGATCCCAGCAGTTGCCAAGGAATTTGTTCCTCAACGGTTGTTGGCCTTCTAATTTTCCTTGGCATAGAATGGATCAAGTATAAACGTCGATTGGTTAGACAAGATCTCATGAATAAAAGGGATGCATATTTTCGTCAACATGGAGGCCAATTATTACTTGATATGATGAAATTAGAGAATCAAGTTTCATTTAAGTTGTATGACAGAGAAGAAATTGAGTTAGCAACAAACAATTTCAGGGAGAGCGCAATCCTCGGTCAGGGCGGTCAGGGTACTGTTTACAAAGGTTTTGATCTAGATCCAGAAAACAATCCTGTGGCAATAAAGAGATGCAAGGGAATCGATGCGAATAGGAGGATGGAATTCGGACAAGAGTTGCTCATACTCTCCCGAGTGAGACATGAGTACATTGTCAAACTTCTTGGTTGTTGTCTGCAGTTTGAAGTTCCTGTTCTAGTATATGAATTTGTGCCGAATAAGACCCTACACTATTTGATTCATGGCCAAAGCGATGCATCCACTAGAACACTAGATATCCGACTGGAAATCGCTGCCCAGTCTGCTGAAGCACTTGCATACCTACATTCACTTGATCATCCTATTTTTCATGGGGATGTGAAATCTGCCAACATACTTATTGGTGACAAATTTACTGCAAAAGTTTCTGATTTTGGGTGCTCAATATTTAGGGCAGCGGCTGATGAAAATATTAATGTAGTGAAGGGAACAATTGGTTATCTAGATCCAGAATACCTCATGACGTTCCAGTTGACTGATAAGAGTGATGTCTACAGCTTTGGCATTCTTCTTCTAGAGCTCTTGACACGTAGGAAGCCTCTATCCAATGAGGTGAGCCTCGCCTCTCTCTTCCAAGATGCTATGAAGAAGGGAAACATTGATCATCACATAGATAAAGAAATACTACATGAGGATAACATGGAACTGCTACACGAATTCGCATGTCTAGCAAGCCAGTGCTTAGTTATGGACAGTGAGAACAGGCCAGCAATGAGCCATGTGGCAGACATACTTCGGCAATTGGCAGATACGGCGTCACAACAACACACTGGCACACTTCAGGGTATTCGCTCACTCAGATTATTGGGAAACTCAAGTGGTAGCATCTCAGAGCCGTGTTATTCTCCTGTTGAAACAATGGAGTATGACAGCAGGAAGACATCTATGGGCATTGAATTTGCAAGATAA
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| Protein seq | MTIHTKTALLCLLGAVATTAWLSFAVAQPQPPPACRRRCGDVDIPYPFGLNGDAPGCALGHGTYGFNISCNDTGNGVYKPFIWDVELLGVLLPEGQARILMSISSYCYNPATGAMDGPENNTWALDFTSSPYRFSHTGNVFTAIGCRTLAYIGGDNVDADVGSLTTGCVATCRLQAGNLTVTDDDVGACSGIGCCRTSIPVGLQYYYVWFDDRFNTTAIHNVSRCSYAALMEKSSASWFRFTPEYVTSSAFNDTFNGQVPLLLDWAIGNETCEQARRASPESYACRSRNSECFDSPSGLGYICNCSKGFRGNPYLHPEDPSSCQGICSSTVVGLLIFLGIEWIKYKRRLVRQDLMNKRDAYFRQHGGQLLLDMMKLENQVSFKLYDREEIELATNNFRESAILGQGGQGTVYKGFDLDPENNPVAIKRCKGIDANRRMEFGQELLILSRVRHEYIVKLLGCCLQFEVPVLVYEFVPNKTLHYLIHGQSDASTRTLDIRLEIAAQSAEALAYLHSLDHPIFHGDVKSANILIGDKFTAKVSDFGCSIFRAAADENINVVKGTIGYLDPEYLMTFQLTDKSDVYSFGILLLELLTRRKPLSNEVSLASLFQDAMKKGNIDHHIDKEILHEDNMELLHEFACLASQCLVMDSENRPAMSHVADILRQLADTASQQHTGTLQGIRSLRLLGNSSGSISEPCYSPVETMEYDSRKTSMGIEFAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.1012625 | 2.048704 | 0.4095745 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0275100 | RBH | 0.0 | 0.0 | 0.225091 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g20680 | RBH | 0.0 | 0.0 | 0.057943 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0275100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0005940 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0006520 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0006360 | RBH | 0.0 | 0.840987 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0005980 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0006420 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0006250 | RBH | 0.0 | 0.060504 | 0.046490 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0194300 | RBH | 0.0999285 | 3.855455 | 0.1039725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0006030 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0006300 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0006270 | RBH | 0.0 | 2.350280 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0006190 | RBH | 0.0 | 0.120069 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0006440 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G006120 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0006240 | RBH | 0.0 | 5.313581 | 0.0 |
