Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_04G0097900 OGI:04021320 | 1/16 Minghui 63 | MH63RS3 | HZAU Chr04:6213602-6216052
Gene Symbol -
DNA seq

TTAAACGGAATCTCGTCCTCGAGATTCAGAAGAACTAGAGAACAGATGGGGTTGAGCTGACTTCAATTCATCTTCTCGCTCCCAAGTGGCTTCTTCTTCTGAATGATTACTCCACTGAACCTTACAGAACCGTATAACGCGATTCCTGGTTTTCCTCTCGCTTACTTCCAAAATTCTGACTGGCTTCTCAACATAAGTTAAATCTTCTTGAAGCTCTATACGATCAGGATCTGCTTCCTCCGTAGGTACACGTAAACATTTCTTCAACTGAGACACATGGAACACATCATGTATTCCCGCCATTGACGGAGGCAACTCTAACTGATAAGCTACTTCACCTCTTCGACTCACAATCTTAAAAGGTCCCACAAAACGCGGTGCCAATTTCCCTTTGGTTTGGAAACGATGAACTCCGCGTAACGGCGTAACTCGAAGATATACATAATCTCCTTCTTCGAAAGCTAAATCTCTGCGACGATTGTCAGCATAGCTCTTCTGACACGACTGAGCAACGCGCAATCTTTCTTGGATAATCTTCACTTTTTCTTCCGCCTTTCGTAATATATCTGTCCCAAAAACTTGACGTTCACCGGTTTGATCCCAAAGAAGCGGCGTACGGCACTTTCGACCATATAATGCTTCATTCGGAGACATTTGCAAACTAGCTTGATAACTATTGTTATATGAGAATTCCGCGTACGGCAAATTTTTATCCCAACTTCCACCAAAATCTAGAACACAGGCTCTCAACATATCTTCTAAAATTTGGTTTACTCTTTCCGTCTGACCATCTGTTTGAGGGTGATAGGCAGTACTGAAATTCAAACGGGTACCCAATTCTGATTGTAATTTCTGCCAAAACTTCGAAGTAAACTGGCTACCTCTATCTGACACTATCTTCTTAGGAACACCATGCAAACATACCACTCTGGCCATATATAACTCTGCAAGCTTATTCCCCGTATAGGTTGTTTTGACCGGTATGAAATGAGCGACTTTTGTCAACCGATCAACCACTACCCAAATAGAATCATGTCCTGCCGACGTTCTGGGTAGACCGGTTATAAAATCCATTCCTATTTCTTCCCACTTCCACTCTGGAATCTTCAACGGTTGTAACAGACCAGCTGGCTTCTGATGTTCCGCTTTGACCCGCTGACAAACATCACATAGGGCCACATATTCTGCTATCTCACGTCGCATACTGGCCCACCAGAATTGTTGCTTTAAGTCTTGGTACATCTTAGTGCTTCCAGGGTGAATAGAATACAAAGTTTCATGAGCTTCTTTCATGATAGTATCCTTCAACTCCTTATTATCTGGGACACAAATTCTTTCTTCTAACCACACAGTACCTTGCTCATCTTCTACAAAACCGATGGCTTTTCCTCTTCGCATGTTCTTCTTTATTTCCTGGATATCAAGATCATTCACTTGAGCTTCTCTAACTTGATCAAACAGAGTAGGTTTAGCTTCCAAAGCGGCCACAAAACCTCTGCTAACTATTCCCAAGTTCAACCTTTCAAATTCTTGGCATAACTCCCAAGGTAAACGTCGACCTTCTGACGTATTACAGTAGCTTTTCCTGCTAAGGGCATCGGCTACAACATTTGCTTTTCCCGGGTGATAATGGATTTCCATATCATAGTCCTTAATCAACTCTAACCATCTTCGCTGACGCATGTTCAAATCAGGTTGAGTGAAAATGTACTTCAAACTTTTATGATCCGTATATATCTCTGTACGGTTACCGTAAAGATAATGACGCCAAATCTTCAATGCATGCACCACAGCTGCCAACTCTAGGTCATGCGTTGGATAGTTATTCTCATGAGGACGTAATTGCCTAGATGCATAAGCAACCACTTTTCCTTCTTGCATCAACACACAACCCAAACCGAGTCGGGATGCATCACAATACACTTGGAAACCTTTCCTCGAATCAGGCAAAATTAACACAGGCGCAGTCACTAGCCTTTTCTTCAGTTCTTGGAAACTTTGTTCACAATCCTCCGTCCACTTGTACTTCACATCCTTCTGAAGCAGACGAGTCATTGGTCTGGCGATCTTTGAAAAGTTCTCAATGAACCTACGGTAATACCCAGCAAGTCCAAGGAAACTACGAACTTCTGAAACCGTCTTGGGTTGCTTCCAATTTAACACTGTCTTCACATTACTTGGATCCACTGCCACTCCTCCAGATGAGATGACATGACCAAGAAACTTCACTTCGGACAACCAAAATTCACACTTACTGAACTTGGCATAAAGCTGATGCTCACGTAGTTTCTCTAAAGCGAGACGAAGATGCTCTTCATGTTCTTCCTTCGTCTTGGAGTAAATGAGAATGTCATCAATAAACACTACGACAAACTTATCCAAATATTCCATAAACACCTTGTTCATCAGATTCATGAAAAAGGCTGGGGCATTAGTGAGTCCAAACGACAT

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CDS seq

ATGTCGTTTGGACTCACTAATGCCCCAGCCTTTTTCATGAATCTGATGAACAAGGTGTTTATGGAATATTTGGATAAGTTTGTCGTAGTGTTTATTGATGACATTCTCATTTACTCCAAGACGAAGGAAGAACATGAAGAGCATCTTCGTCTCGCTTTAGAGAAACTACGTGAGCATCAGCTTTATGCCAAGTTCAGTAAGTGTGAATTTTGGTTGTCCGAAGTGAAGTTTCTTGGTCATGTCATCTCATCTGGAGGAGTGGCAGTGGATCCAAGTAATGTGAAGACAGTGTTAAATTGGAAGCAACCCAAGACGGTTTCAGAAGTTCGTAGTTTCCTTGGACTTGCTGGGTATTACCGTAGGTTCATTGAGAACTTTTCAAAGATCGCCAGACCAATGACTCGTCTGCTTCAGAAGGATGTGAAGTACAAGTGGACGGAGGATTGTGAACAAAGTTTCCAAGAACTGAAGAAAAGGCTAGTGACTGCGCCTGTGTTAATTTTGCCTGATTCGAGGAAAGGTTTCCAAGTGTATTGTGATGCATCCCGACTCGGTTTGGGTTGTGTGTTGATGCAAGAAGGAAAAGTGGTTGCTTATGCATCTAGGCAATTACGTCCTCATGAGAATAACTATCCAACGCATGACCTAGAGTTGGCAGCTGTGGTGCATGCATTGAAGATTTGGCGTCATTATCTTTACGGTAACCGTACAGAGATATATACGGATCATAAAAGTTTGAAGTACATTTTCACTCAACCTGATTTGAACATGCGTCAGCGAAGATGGTTAGAGTTGATTAAGGACTATGATATGGAAATCCATTATCACCCGGGAAAAGCAAATGTTGTAGCCGATGCCCTTAGCAGGAAAAGCTACTGTAATACGTCAGAAGGTCGACGTTTACCTTGGGAGTTATGCCAAGAATTTGAAAGGTTGAACTTGGGAATAGTTAGCAGAGGTTTTGTGGCCGCTTTGGAAGCTAAACCTACTCTGTTTGATCAAGTTAGAGAAGCTCAAGTGAATGATCTTGATATCCAGGAAATAAAGAAGAACATGCGAAGAGGAAAAGCCATCGGTTTTGTAGAAGATGAGCAAGGTACTGTGTGGTTAGAAGAAAGAATTTGTGTCCCAGATAATAAGGAGTTGAAGGATACTATCATGAAAGAAGCTCATGAAACTTTGTATTCTATTCACCCTGGAAGCACTAAGATGTACCAAGACTTAAAGCAACAATTCTGGTGGGCCAGTATGCGACGTGAGATAGCAGAATATGTGGCCCTATGTGATGTTTGTCAGCGGGTCAAAGCGGAACATCAGAAGCCAGCTGGTCTGTTACAACCGTTGAAGATTCCAGAGTGGAAGTGGGAAGAAATAGGAATGGATTTTATAACCGGTCTACCCAGAACGTCGGCAGGACATGATTCTATTTGGGTAGTGGTTGATCGGTTGACAAAAGTCGCTCATTTCATACCGGTCAAAACAACCTATACGGGGAATAAGCTTGCAGAGTTATATATGGCCAGAGTGGTATGTTTGCATGGTGTTCCTAAGAAGATAGTGTCAGATAGAGGTAGCCAGTTTACTTCGAAGTTTTGGCAGAAATTACAATCAGAATTGGGTACCCGTTTGAATTTCAGTACTGCCTATCACCCTCAAACAGATGGTCAGACGGAAAGAGTAAACCAAATTTTAGAAGATATGTTGAGAGCCTGTGTTCTAGATTTTGGTGGAAGTTGGGATAAAAATTTGCCGTACGCGGAATTCTCATATAACAATAGTTATCAAGCTAGTTTGCAAATGTCTCCGAATGAAGCATTATATGGTCGAAAGTGCCGTACGCCGCTTCTTTGGGATCAAACCGGTGAACGTCAAGTTTTTGGGACAGATATATTACGAAAGGCGGAAGAAAAAGTGAAGATTATCCAAGAAAGATTGCGCGTTGCTCAGTCGTGTCAGAAGAGCTATGCTGACAATCGTCGCAGAGATTTAGCTTTCGAAGAAGGAGATTATGTATATCTTCGAGTTACGCCGTTACGCGGAGTTCATCGTTTCCAAACCAAAGGGAAATTGGCACCGCGTTTTGTGGGACCTTTTAAGATTGTGAGTCGAAGAGGTGAAGTAGCTTATCAGTTAGAGTTGCCTCCGTCAATGGCGGGAATACATGATGTGTTCCATGTGTCTCAGTTGAAGAAATGTTTACGTGTACCTACGGAGGAAGCAGATCCTGATCGTATAGAGCTTCAAGAAGATTTAACTTATGTTGAGAAGCCAGTCAGAATTTTGGAAGTAAGCGAGAGGAAAACCAGGAATCGCGTTATACGGTTCTGTAAGGTTCAGTGGAGTAATCATTCAGAAGAAGAAGCCACTTGGGAGCGAGAAGATGAATTGAAGTCAGCTCAACCCCATCTGTTCTCTAGTTCTTCTGAATCTCGAGGACGAGATTCCGTTTAA

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Protein seq

MSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVKTVLNWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNTSEGRRLPWELCQEFERLNLGIVSRGFVAALEAKPTLFDQVREAQVNDLDIQEIKKNMRRGKAIGFVEDEQGTVWLEERICVPDNKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILRKAEEKVKIIQERLRVAQSCQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQWSNHSEEEATWEREDELKSAQPHLFSSSSESRGRDSV

Function Transposon Tf2-9 polyprotein [UniProtKB/Swiss-Prot:P0CT40]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_04G0097900 OsMH63_04T0097900.1 Chr04 6213602 6216052 - maker
CDS seq

ATGTCGTTTGGACTCACTAATGCCCCAGCCTTTTTCATGAATCTGATGAACAAGGTGTTTATGGAATATTTGGATAAGTTTGTCGTAGTGTTTATTGATGACATTCTCATTTACTCCAAGACGAAGGAAGAACATGAAGAGCATCTTCGTCTCGCTTTAGAGAAACTACGTGAGCATCAGCTTTATGCCAAGTTCAGTAAGTGTGAATTTTGGTTGTCCGAAGTGAAGTTTCTTGGTCATGTCATCTCATCTGGAGGAGTGGCAGTGGATCCAAGTAATGTGAAGACAGTGTTAAATTGGAAGCAACCCAAGACGGTTTCAGAAGTTCGTAGTTTCCTTGGACTTGCTGGGTATTACCGTAGGTTCATTGAGAACTTTTCAAAGATCGCCAGACCAATGACTCGTCTGCTTCAGAAGGATGTGAAGTACAAGTGGACGGAGGATTGTGAACAAAGTTTCCAAGAACTGAAGAAAAGGCTAGTGACTGCGCCTGTGTTAATTTTGCCTGATTCGAGGAAAGGTTTCCAAGTGTATTGTGATGCATCCCGACTCGGTTTGGGTTGTGTGTTGATGCAAGAAGGAAAAGTGGTTGCTTATGCATCTAGGCAATTACGTCCTCATGAGAATAACTATCCAACGCATGACCTAGAGTTGGCAGCTGTGGTGCATGCATTGAAGATTTGGCGTCATTATCTTTACGGTAACCGTACAGAGATATATACGGATCATAAAAGTTTGAAGTACATTTTCACTCAACCTGATTTGAACATGCGTCAGCGAAGATGGTTAGAGTTGATTAAGGACTATGATATGGAAATCCATTATCACCCGGGAAAAGCAAATGTTGTAGCCGATGCCCTTAGCAGGAAAAGCTACTGTAATACGTCAGAAGGTCGACGTTTACCTTGGGAGTTATGCCAAGAATTTGAAAGGTTGAACTTGGGAATAGTTAGCAGAGGTTTTGTGGCCGCTTTGGAAGCTAAACCTACTCTGTTTGATCAAGTTAGAGAAGCTCAAGTGAATGATCTTGATATCCAGGAAATAAAGAAGAACATGCGAAGAGGAAAAGCCATCGGTTTTGTAGAAGATGAGCAAGGTACTGTGTGGTTAGAAGAAAGAATTTGTGTCCCAGATAATAAGGAGTTGAAGGATACTATCATGAAAGAAGCTCATGAAACTTTGTATTCTATTCACCCTGGAAGCACTAAGATGTACCAAGACTTAAAGCAACAATTCTGGTGGGCCAGTATGCGACGTGAGATAGCAGAATATGTGGCCCTATGTGATGTTTGTCAGCGGGTCAAAGCGGAACATCAGAAGCCAGCTGGTCTGTTACAACCGTTGAAGATTCCAGAGTGGAAGTGGGAAGAAATAGGAATGGATTTTATAACCGGTCTACCCAGAACGTCGGCAGGACATGATTCTATTTGGGTAGTGGTTGATCGGTTGACAAAAGTCGCTCATTTCATACCGGTCAAAACAACCTATACGGGGAATAAGCTTGCAGAGTTATATATGGCCAGAGTGGTATGTTTGCATGGTGTTCCTAAGAAGATAGTGTCAGATAGAGGTAGCCAGTTTACTTCGAAGTTTTGGCAGAAATTACAATCAGAATTGGGTACCCGTTTGAATTTCAGTACTGCCTATCACCCTCAAACAGATGGTCAGACGGAAAGAGTAAACCAAATTTTAGAAGATATGTTGAGAGCCTGTGTTCTAGATTTTGGTGGAAGTTGGGATAAAAATTTGCCGTACGCGGAATTCTCATATAACAATAGTTATCAAGCTAGTTTGCAAATGTCTCCGAATGAAGCATTATATGGTCGAAAGTGCCGTACGCCGCTTCTTTGGGATCAAACCGGTGAACGTCAAGTTTTTGGGACAGATATATTACGAAAGGCGGAAGAAAAAGTGAAGATTATCCAAGAAAGATTGCGCGTTGCTCAGTCGTGTCAGAAGAGCTATGCTGACAATCGTCGCAGAGATTTAGCTTTCGAAGAAGGAGATTATGTATATCTTCGAGTTACGCCGTTACGCGGAGTTCATCGTTTCCAAACCAAAGGGAAATTGGCACCGCGTTTTGTGGGACCTTTTAAGATTGTGAGTCGAAGAGGTGAAGTAGCTTATCAGTTAGAGTTGCCTCCGTCAATGGCGGGAATACATGATGTGTTCCATGTGTCTCAGTTGAAGAAATGTTTACGTGTACCTACGGAGGAAGCAGATCCTGATCGTATAGAGCTTCAAGAAGATTTAACTTATGTTGAGAAGCCAGTCAGAATTTTGGAAGTAAGCGAGAGGAAAACCAGGAATCGCGTTATACGGTTCTGTAAGGTTCAGTGGAGTAATCATTCAGAAGAAGAAGCCACTTGGGAGCGAGAAGATGAATTGAAGTCAGCTCAACCCCATCTGTTCTCTAGTTCTTCTGAATCTCGAGGACGAGATTCCGTTTAA

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Protein seq

MSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVKTVLNWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNTSEGRRLPWELCQEFERLNLGIVSRGFVAALEAKPTLFDQVREAQVNDLDIQEIKKNMRRGKAIGFVEDEQGTVWLEERICVPDNKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILRKAEEKVKIIQERLRVAQSCQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQWSNHSEEEATWEREDELKSAQPHLFSSSSESRGRDSV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0055735 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0191000 SBH 0.0 0.0 1.668803
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g07470 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os04g0191000 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0284500 SBH 0.0033605 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0062900 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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