Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0045800 | OGI:04009290 | 4/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:2822523-2823549 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCCTTCCCGAGTAAGGAAACCTCGAAACCCGACGCAACAGAATCGGAGTCGGGCCTGCCGGTCAGACCGGCCACACACCGCCGGTCTGACCGGCCTTCAACCGGCGGTATGACCGCCCAACACATGGCGGTCAGATCGGCCCACCTCGAAGGAAACCGGTAGACTTCCAAATTTTGGCAATAATTCCTATTTTAAGCCTAGGTGCCAAATTTGGGTGTAAACAGTCCGCAACCAACTCGATTGGCTTGATCAAGGCAGAAAAGGGTCTGCACGCAGTGGCTGAGCTGAATCCGAAAGTTGAAGATCAGAAATATCTCCAACGCTACATCTGCGACGAGATCCAGGAGAGCATCCTTATCTGGCACATCGTCACGGACATCTACCTTCACACTACGTTTGTGCGAGCAATCAAGCTTCTATCCAACTACCTCTTGTTCCTCATGGTGGAACACCCAACGATGGTTCCTGGCATCGACCTTCGCAAATACTACACACAAACATACAAGAAATTGTCGACGAACCATGCTGGCAACACCAATGGTGATCCTGACAGACTAGCCAAAATCCTCGCTCAGAAGAGGTCCGTAAATCCGGTCTTGAAGGAAAACGATGAAAACCAAGCCCTTCGCGGAAATGCTCTGCTGCTTGCAACCAAGCTTACACTCAAGCTTGTTCAACTGAAGGATAAATTGCTGAAAGAGTCTGCGCCTATTACCAAAAAGGAAGAGAAAAAGAAAGTTGACATGGAAACGTTTCTGTTTTACATGTGGGTGGAGTTGCTGCTCTACGTCAGCCACCGGTGTAGCAGGGAATCACATGCCAATAAGCTTAGCGAAGGCGGCGAGCTGACAACCATCGTTTGGCTTATGGCGGAGCAAGCTGGCAAGTTCTACATCGATAAGAAACTCAGTGAAGAAGATAATGTCGATCGACCCACCGCACTAGAACGGAGACCCTCATCTCAATCGGGCGGTAAGCCCCATCTCAATCGGGCACAGCGTCCGTCACAGTCTAGAAGTCACTGA
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| CDS seq | ATGCCTTCCCGAGTAAGGAAACCTCGAAACCCGACGCAACAGAATCGGAGTCGGGCCTGCCGGTCAGACCGGCCACACACCGCCGGTCTGACCGGCCTTCAACCGGCGTCCGCAACCAACTCGATTGGCTTGATCAAGGCAGAAAAGGGTCTGCACGCAGTGGCTGAGCTGAATCCGAAAGTTGAAGATCAGAAATATCTCCAACGCTACATCTGCGACGAGATCCAGGAGAGCATCCTTATCTGGCACATCGTCACGGACATCTACCTTCACACTACGTTTGTGCGAGCAATCAAGCTTCTATCCAACTACCTCTTGTTCCTCATGGTGGAACACCCAACGATGGTTCCTGGCATCGACCTTCGCAAATACTACACACAAACATACAAGAAATTGTCGACGAACCATGCTGGCAACACCAATGGTGATCCTGACAGACTAGCCAAAATCCTCGCTCAGAAGAGGTCCGTAAATCCGGTCTTGAAGGAAAACGATGAAAACCAAGCCCTTCGCGGAAATGCTCTGCTGCTTGCAACCAAGCTTACACTCAAGCTTGTTCAACTGAAGGATAAATTGCTGAAAGAGTCTGCGCCTATTACCAAAAAGGAAGAGAAAAAGAAAGTTGACATGGAAACGTTTCTGTTTTACATGTGGGTGGAGTTGCTGCTCTACGTCAGCCACCGGTGTAGCAGGGAATCACATGCCAATAAGCTTAGCGAAGGCGGCGAGCTGACAACCATCGTTTGGCTTATGGCGGAGCAAGCTGGCAAGTTCTACATCGATAAGAAACTCAGTGAAGAAGATAATGTCGATCGACCCACCGCACTAGAACGGAGACCCTCATCTCAATCGGGCGGTAAGCCCCATCTCAATCGGGCACAGCGTCCGTCACAGTCTAGAAGTCACTGA
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| Protein seq | MPSRVRKPRNPTQQNRSRACRSDRPHTAGLTGLQPASATNSIGLIKAEKGLHAVAELNPKVEDQKYLQRYICDEIQESILIWHIVTDIYLHTTFVRAIKLLSNYLLFLMVEHPTMVPGIDLRKYYTQTYKKLSTNHAGNTNGDPDRLAKILAQKRSVNPVLKENDENQALRGNALLLATKLTLKLVQLKDKLLKESAPITKKEEKKKVDMETFLFYMWVELLLYVSHRCSRESHANKLSEGGELTTIVWLMAEQAGKFYIDKKLSEEDNVDRPTALERRPSSQSGGKPHLNRAQRPSQSRSH |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0045800 | OsMH63_04T0045800.1 | Chr04 | 2822523 | 2823549 | + | maker | ||
| CDS seq | ATGCCTTCCCGAGTAAGGAAACCTCGAAACCCGACGCAACAGAATCGGAGTCGGGCCTGCCGGTCAGACCGGCCACACACCGCCGGTCTGACCGGCCTTCAACCGGCGTCCGCAACCAACTCGATTGGCTTGATCAAGGCAGAAAAGGGTCTGCACGCAGTGGCTGAGCTGAATCCGAAAGTTGAAGATCAGAAATATCTCCAACGCTACATCTGCGACGAGATCCAGGAGAGCATCCTTATCTGGCACATCGTCACGGACATCTACCTTCACACTACGTTTGTGCGAGCAATCAAGCTTCTATCCAACTACCTCTTGTTCCTCATGGTGGAACACCCAACGATGGTTCCTGGCATCGACCTTCGCAAATACTACACACAAACATACAAGAAATTGTCGACGAACCATGCTGGCAACACCAATGGTGATCCTGACAGACTAGCCAAAATCCTCGCTCAGAAGAGGTCCGTAAATCCGGTCTTGAAGGAAAACGATGAAAACCAAGCCCTTCGCGGAAATGCTCTGCTGCTTGCAACCAAGCTTACACTCAAGCTTGTTCAACTGAAGGATAAATTGCTGAAAGAGTCTGCGCCTATTACCAAAAAGGAAGAGAAAAAGAAAGTTGACATGGAAACGTTTCTGTTTTACATGTGGGTGGAGTTGCTGCTCTACGTCAGCCACCGGTGTAGCAGGGAATCACATGCCAATAAGCTTAGCGAAGGCGGCGAGCTGACAACCATCGTTTGGCTTATGGCGGAGCAAGCTGGCAAGTTCTACATCGATAAGAAACTCAGTGAAGAAGATAATGTCGATCGACCCACCGCACTAGAACGGAGACCCTCATCTCAATCGGGCGGTAAGCCCCATCTCAATCGGGCACAGCGTCCGTCACAGTCTAGAAGTCACTGA
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| Protein seq | MPSRVRKPRNPTQQNRSRACRSDRPHTAGLTGLQPASATNSIGLIKAEKGLHAVAELNPKVEDQKYLQRYICDEIQESILIWHIVTDIYLHTTFVRAIKLLSNYLLFLMVEHPTMVPGIDLRKYYTQTYKKLSTNHAGNTNGDPDRLAKILAQKRSVNPVLKENDENQALRGNALLLATKLTLKLVQLKDKLLKESAPITKKEEKKKVDMETFLFYMWVELLLYVSHRCSRESHANKLSEGGELTTIVWLMAEQAGKFYIDKKLSEEDNVDRPTALERRPSSQSGGKPHLNRAQRPSQSRSH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0139100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g05700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0154800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001710 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001870 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0001750 | SBH | 0.0 | 5.818364 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0044000 | SBH | 0.0286345 | 0.0224975 | 0.014109 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001740 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0001630 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001890 | RBH | 0.0 | 0.0 | 0.0 |
