Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0596200 | OGI:03097690 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:38097920-38098743 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTATTCCGCCAACCCCTTGTCGCGAGTCGGTCCGACGTCCAGACTCTATTTTGAATGATGAGCCAGGCATGAAATTTACATTTCCCTGGCGCCCAAACTTTCCAGATTAGGGAGTTGAAGTTTGTGTTTGGCGCCCCCAAACATTGGGCATGATAAGCCGAGGAAGCTGTATAGTGGCCGCTGCTTGTGAATTTCCAAACAATCTGATCCGGCTCCTCGCTGTCTAAGTGCACATTCCGTACCGCCTCCCACAGGCGGACTAGCTGATCGAGAAGGTTGATTGTGATAGATGAACCCACATCGAGGGTCAGGTCATGCACCCAGGAGTCGTCTTCTTTCCCTTGCCGTAGGGATTTCTTCCTATTTTTGGAGATCTCATAGACCAACGGCATTAGGTCTTTTGGTCTTCGGCCGTTAATCCATGCGGAGTCCCAGAAGCGCGTCGTATTCCCATCGCCCACAGTTATCTTTGTTGAGGCGGCGAAGAGGTCCCTATCCACACCATCACAAGGCGTTTCCAAACCCACCCAAGGCTTGCTTGGATCTCTCCATTCGTTCCACAACCATCGCAATCTCAGAGCTCTTGTGAATTTGTCCAAGCTTAGGACACCAAGGCCCCCCTGGCTGGTCGGCAAGCATGTCTTTGCCCAGTTGACCTTGCATTTCCCCCCGGTGATATCCCCCGTACCAGCCCAAAGGAAGCGACGTCTCTGCTTGTCAAGCTGCTCCAGGGATTCCTTCATCACCTTCAAGGCAGTGAGGAGATAAATTGGCTGTGCTGAAAGCACAGACTTTACAAGCGTGGTTCTCCCGGCTGCTGCCAT
More
|
||||||||||
| CDS seq | ATGGCAGCAGCCGGGAGAACCACGCTTGTAAAGTCTGTGCTTTCAGCACAGCCAATTTATCTCCTCACTGCCTTGAAGGTGATGAAGGAATCCCTGGAGCAGCTTGACAAGCAGAGACGTCGCTTCCTTTGGGCTGGTACGGGGGATATCACCGGGGGGAAATGCAAGGTCAACTGGGCAAAGACATGCTTGCCGACCAGCCAGGGGGGCCTTGGTGTCCTAAGCTTGGACAAATTCACAAGAGCTCTGAGATTGCGATGGTTGTGGAACGAATGGAGAGATCCAAGCAAGCCTTGGGTGGGTTTGGAAACGCCTTGTGATGGTGTGGATAGGGACCTCTTCGCCGCCTCAACAAAGATAACTGTGGGCGATGGGAATACGACGCGCTTCTGGGACTCCGCATGGATTAACGGCCGAAGACCAAAAGACCTAATGCCGTTGGTCTATGAGATCTCCAAAAATAGGAAGAAATCCCTACGGCAAGGGAAAGAAGACGACTCCTGGGTGCATGACCTGACCCTCGATGTGGGTTCATCTATCACAATCAACCTTCTCGATCAGCTAGTCCGCCTGTGGGAGGCGAGTCTGGACGTCGGACCGACTCGCGACAAGGGGTTGGCGGAATAA
More
|
||||||||||
| Protein seq | MAAAGRTTLVKSVLSAQPIYLLTALKVMKESLEQLDKQRRRFLWAGTGDITGGKCKVNWAKTCLPTSQGGLGVLSLDKFTRALRLRWLWNEWRDPSKPWVGLETPCDGVDRDLFAASTKITVGDGNTTRFWDSAWINGRRPKDLMPLVYEISKNRKKSLRQGKEDDSWVHDLTLDVGSSITINLLDQLVRLWEASLDVGPTRDKGLAE |
||||||||||
| Function | Putative ribonuclease H protein At1g65750 [UniProtKB/Swiss-Prot:P0C2F6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0596200 | OsMH63_03T0596200.1 | Chr03 | 38097920 | 38098743 | - | maker | ||
| CDS seq | ATGGCAGCAGCCGGGAGAACCACGCTTGTAAAGTCTGTGCTTTCAGCACAGCCAATTTATCTCCTCACTGCCTTGAAGGTGATGAAGGAATCCCTGGAGCAGCTTGACAAGCAGAGACGTCGCTTCCTTTGGGCTGGTACGGGGGATATCACCGGGGGGAAATGCAAGGTCAACTGGGCAAAGACATGCTTGCCGACCAGCCAGGGGGGCCTTGGTGTCCTAAGCTTGGACAAATTCACAAGAGCTCTGAGATTGCGATGGTTGTGGAACGAATGGAGAGATCCAAGCAAGCCTTGGGTGGGTTTGGAAACGCCTTGTGATGGTGTGGATAGGGACCTCTTCGCCGCCTCAACAAAGATAACTGTGGGCGATGGGAATACGACGCGCTTCTGGGACTCCGCATGGATTAACGGCCGAAGACCAAAAGACCTAATGCCGTTGGTCTATGAGATCTCCAAAAATAGGAAGAAATCCCTACGGCAAGGGAAAGAAGACGACTCCTGGGTGCATGACCTGACCCTCGATGTGGGTTCATCTATCACAATCAACCTTCTCGATCAGCTAGTCCGCCTGTGGGAGGCGAGTCTGGACGTCGGACCGACTCGCGACAAGGGGTTGGCGGAATAA
More
|
|||||||
| Protein seq | MAAAGRTTLVKSVLSAQPIYLLTALKVMKESLEQLDKQRRRFLWAGTGDITGGKCKVNWAKTCLPTSQGGLGVLSLDKFTRALRLRWLWNEWRDPSKPWVGLETPCDGVDRDLFAASTKITVGDGNTTRFWDSAWINGRRPKDLMPLVYEISKNRKKSLRQGKEDDSWVHDLTLDVGSSITINLLDQLVRLWEASLDVGPTRDKGLAE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g56910 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0041620 | SBH | 0.255608 | 0.000000 | 0.427363 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0471100 | SBH | 0 | 0 | 0.007442 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0553800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0041380 | SBH | 0.000000 | 2.322688 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G040941 | SBH | 0.324402 | 1.382530 | 2.020595 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
