Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0499400 | OGI:03081580 | 12/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:32191991-32196545 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCCATCTTTCAAGTTATGCAGATGTCATCACAAATTGTTACACCAATCACCAGGCTGGCTGTTTATATATTATCAGACCAGGCTATATAGAGTATACTATACTAACTGTTCATATTATCTGGAAATCTTGCTTGCTACTTGAGCGGTAAAAGGGTATAGATATGAGGTTAAGGAACGAAGCGGCAGCAAATCGAGGCTCTCTCTGAAATCATTTTTACATCTACAAAAGCACATTTTAACCTTTTCTAGAACACATATGTTACTTAGAAGCAGGAAGTTCATGCAAAATTTCATCGACAAGATAACCAGGGCGGCACTGGAAGAGTTATCTTTTACTCAATCTGTATAGCATCAAAGTTCATCGGATTGTACATTGGCTAAAAGTTTCCTGTTTCATTTGAACCACCTCAGCAAAAGCAACCTGAAGAGTTTGTTGTGCAAAGGTAAAAACTTCCCCAGACGTTGATCCTTCCCTTGCATATCTAAGGGCATCACGGTGAAGCTCACTGTACCGCAAGCATTCGTCCAACACAAAGCCATTCTTTGCTTCTTTTGTCCACCGTTTCAATATGTAAACATCTGGTATGGTGCGTACATCAAGGGCCAAGAATACTCTTAGTATATGCCGGCACAAGATACCACAACTCTCAAACTTGCAGCAGCTGCACTTAGCTATATTGCCAGAAGTATCATACCTGACTCTGCATGTGGCTTCAGTATCCTCCTTTGTGACACTATACACAGCAATCAACCCATCATTGTCAAGACTAGAGATATAATAGCCTAAAGATCCAATGAATTCTTCCTCAAGAATGTTGAACACAGTTGTTGTGTATATTTCTGACACTTGTTTCATCATGTTTGAGGGGGTTCTTAGGACAGGTCTGGTAAAAGATGTGGCCAGATCCTCCACAGCTTCTCTTTCTGACCAACCGGCCATCAGATGCTCAAACAATGAAATGAAAACTGGTAAAGCTGTTCTTCTGTTGAAGTACTTCTCAAAGATGTTTCTCAAGCTTTCAGGTCTCTGAGATGCTGCAAGATCAGCAGTAAATACACCTTTGAAATATACAGGAACCCATTTTTGCCGAATTCTGTACAGAGACTGGAGCCATGAGTTGTCATGCAAGTCATACTTATCAAGGACTTTCTTCCAACTTAACTCAAACATTTCAATTGTTTCAGGCTCATTGATGCACACATAAAATTCTCTTTCAAAAGAAACATGCCTAAAATATATGTCAGCCAAAATGTCCTTGGATCTCTTTAATATGTCTGCAGTAAAATACAGATGGTGCGTTTGTGGAAATATTTTTGCTATTGCTGAACCAATTGCTTCATTATAAACCGTTGTTAGTGACGTAGGATGGTGTGAACCCATTGCTGCAATCCAGTTCTGAAAGAGCCAAATGTAGGAAGCCTCCGTGAAATCAGTTAATAATGCACAACCAAACATTTCACGTTGCAAGTGATGATTGACACCAGAAAACATAACTAATGGCAAAAGGTCATTATTCTCAACAAAAGATGTCTCGAGTGTTACGGCATCTCCAAAATAGTAATACGATGTTCTTGCTTTGGCATCAGCCCAGAAGGCATGGGTTAAGCAATCATTTTTCTCGACTTGAAATGCATATGAAAATGTGGGATTCTCGGCATTCAGCCGCTTGAAGTATCCAAGAAGCTTTTGCGTATCATCCAACCCAAATGCATTACGGCGTGGTTCTCTTATTTCTTGATCATTTGTCGCCTGCTTTTCAAAATTCCTCCCTAGGTCTGCCAGAGGTGAATTCAAGGTTGGAGCAATTGAATTCTCTCGAAGAACACTACTTTTTGCAAGAACAACTACCTCACTGTTTGACTGAATGTAGTGCACCTTGTTTGGTACATTGGCCAGCTCATGTGTATGTGCCAAGAAAAGCTTCGAAACAACCCATTTATCTTGATCCTTCTTCACTATCTCAAACATCGCTTGGCAACCTTCCCTTGGAACACCCCGGTTTCTCTTTCTCCTGTTCTCATTTTCTTCGCACGGTGTAGCCCCCTCCCTTGTGCAAACAAAGCGCCGCATTACAAATGTCTCATCCTTTGGTGAACGGCGGGATAATCTGATACGTACATCAAAGCCCATACGGCTAGCATACGCATAGTAGAATGTTTGGGCAGATTCATAAGAAGGGAATTCCATTCCTGCAAAAGGTTCTAGTTGTGCATATTCTTCAGGCGCAACGTATCTCACTATGCTTGGAGCTGCAACAGCATGATTGTGTTCCTTGATGAGCTTGATCACAACCCACCGCCCATAATATTTCTGACTAACCTCGATCATCGCATGGCAACCCTCCCTTATTATTGCACGCTTTCTCTTTCTCTTGCCAGTGTCAGTTTGCTTCTTGTGGTGGAAACCTTCCTTTGAACACACAAAACGGCGCATGATAATAGACTCATCATTCCTTGAGCGTCGGGACTTGCTAATGCGCACAGAGAAACCTACTCGACTAGCATAAGCCATGTAGAACACCTTTGCAGCCTCTTCTGATTCAAACTCCATCCCAACAAAAGGTTCACTATTTTCCAGATTCGCTTTGCTGGAAGTATTATTCATGTCAACTGGTTCACTGTTGACATCAAATGCCATCTGATTTTCAGTATAATCATCATTAAGATCAACAAGATTGTCCCTCAACAAATTATCTTCACTCGAGGCATTGTCCATCACAAAAACTTTTCAACAGTGCCGACCCACACATTAACCAGGAAGTCTGTTTCAAAAATGAGGTCATATACTCTGGAAAAAAATGGAACAGCAGAAGTCTCTTTGGTAACCAAAATAAGCAAAATGCTCACTGGAAAAATAAGATGAACTGGCTAATTGCATAAATAAAAGAGATACTACTTTTAAATTATTGCTCATAGCTATTGGAGGCTTCAGGGTGCAACTAAATAAATTTATGAAACAACTAGGTGTCATCAAGGAAACCTCCAATGGCTTTTGCTGTCTGAGAATATAACATTGGCAAAGATAAGAATACACAGATCTAGGTTTTCTCAAGGTGGTTAATAATCATACGATGTTAGTCAGATTCTAATTGCATGGAAATAAGGCATCATATTGTAGAATCAAACTATGAAAAGGCAAAACCACATATCTCATCTGCTTTTAAGTCTGGCAAATTTTGTGTCTAATTGTCATTCAAACAACAATTTCATACATGTTAAAGCACTTACCATTGTGGTATGGCATTGAGCTCCAAATAATTTAGAGCCTCCACTAACATAGCAAATTAATAGTCTAGGTATGGTGTGAACATGGACAATTTCTAAAGATTGTATACACTATCCAAATATGCTATGGATTAAAGATGGACTAACCAGCTCAGAGCTACAGGTGCTCAGTAGTGCGAGTTTTAGTACTGAAGTGCTGTGGTTACAGCCCTTCAACTGCAAAGTGATCCAGTTATTCTTCCATTGTCCTTCAACAGAGGAGCTTGCATGGTGCAATATGTTCCAGGACCCATGACCACAAGGAGGCCAGAGAGGAGTATGAGCTGAGGGCAATCATTGCAGTGGATGCACCTGCTCAACAAGATCCGGTGACCAACAGGAGCGTGTCTAGTTACCAGCGATTGGACCTGATCAGAAGTAAACTATATGAGAGAGTAGATTAAGAGGCCACAGGTAGCCTAGCTTTTCTATCAGTCACGCGATAATGATATCAAGACCAAACTGTTACCCAATGAAGGTAAATAGATGCTAGTAAAAAAACAGCAGCATGCAATGATTTTTGTAGAACAGTTGGATGGCGTTATAAAGCCTTAGTGTATCAACCCGTAGACTGGCATTATGCCTTACACAAATGATAACAAAATATAGAGAAAGCACATAGTATTACTGAAGGCCCAGATCAAAGTAAGAGTAACCCCCATCCTGAAACGGTAGCGTTTAAACAGAAGAGCATGATTTCCCAACATGAGAAATTAGCAAGGGATTCAAAACTTAGCACACTAATAAGCAAACCAATGCAAGTTATCAATTTATAAAAGCAGTAATCGCCACAGACAATTCTATTTATAATAGTAAGCAACATCTACATATACTTTCTATTTACATATCAACCAAAAATATAGAAAATTAATTATAACTTCCCTCTCCAGTTCACAAAGCATTATTCAACACAGTACATACTATCATGCGTGATCACCAAACCCACGCAAATTCAAGTGCAAAATTCATAACAGGAAGAATGTCACCTCTTCTCAGGACGCCAGCACCTCCGCACCGTGCCACCGAGGGCGGGGACGCAGCAAGACGCCGCCACCGCTTGGTCGTGGACCTCGCCTCCGATGCACGCCGCCTCCGAGCCTCCGCCTCGCCTCTGGGTCACCACCGCCGACCCAAGCCCTGCCCCAATATGCCCACAGAAAGAAATGAAATGAAATGAGAAGAAAATGTAGATGCGCATATAATTACCCTACTTATTATAACATTTCAGGCTCAACGAATTTGCATCCTTTTTCCAGCTTCCTACAAAATCTGTTTTACATAATTTACACAT
More
|
||||||||||
| CDS seq | ATGTGGCTTGGGTCGGCGGTGGTGACCCAGAGGCGAGGCGGAGGCTCGGAGGCGGCGTGCATCGGAGGCGAGGTCCACGACCAAGCGGTGGCGGCGTCTTGCTGCGTCCCCGCCCTCGGTGGCACGGTGCGGAGGTGCTGGCGTCCTGAGAAGAGAGTATATGACCTCATTTTTGAAACAGACTTCCTGGTTAATGTGTGGGTCGGCACTGTTGAAAAGTTTTTGTGA |
||||||||||
| Protein seq | MWLGSAVVTQRRGGGSEAACIGGEVHDQAVAASCCVPALGGTVRRCWRPEKRVYDLIFETDFLVNVWVGTVEKFL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0499400 | OsMH63_03T0499400.1 | Chr03 | 32191991 | 32196545 | - | maker | ||
| CDS seq | ATGTGGCTTGGGTCGGCGGTGGTGACCCAGAGGCGAGGCGGAGGCTCGGAGGCGGCGTGCATCGGAGGCGAGGTCCACGACCAAGCGGTGGCGGCGTCTTGCTGCGTCCCCGCCCTCGGTGGCACGGTGCGGAGGTGCTGGCGTCCTGAGAAGAGAGTATATGACCTCATTTTTGAAACAGACTTCCTGGTTAATGTGTGGGTCGGCACTGTTGAAAAGTTTTTGTGA
More
|
|||||||
| Protein seq | MWLGSAVVTQRRGGGSEAACIGGEVHDQAVAASCCVPALGGTVRRCWRPEKRVYDLIFETDFLVNVWVGTVEKFL |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.5856245 | 6.347563 | 13.0054315 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0032280 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0031880 | RBH | 0.464063 | 4.706016 | 4.944968 |
