Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0487500 | OGI:03079740 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:31367561-31372233 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAATGCTGTAATCAAACAGGGACTAACACATAAAAAGAGCATTAACAGAACTATAAACTTTAAAGTCAAAGTATGACATACCCACTCCACATTAGGATATGGTATGTTACGAGTAAGCATTTCCAATACAGTGCAGCCAAGACTCCAAATATCAGCCTGGGGCCCATATGTTTTTTTAGGATTAACAACCTGAAAAATAAGAAGTTGTATTTAGCACTTTCACAGTTTATGGCCAAGACATAAGTATCATTAAATAATGGAAAACAACATCATACTATTAGTCAGATCCGCAAGAATCATGATTAAATAAAAGTAAATAGCATAGGATAAATAAACTTTTACCTCAGGTGCCATCCAATAAACACTTCCTTTGCATGATCTCAGCATGTTAATTTTTGACATCTGAAATCCAACAAGAAGAAAATTACCACCGTAAGACAGCATCATAGATAAAGCACTAATATTCATACAAAAAAAAAAAGCTAACCTCCTTCGCCAACCCAAAGTCTGCCAATTTTACTGATCCATTTGCATGAACCAGTATATTTGCGCATTTAATGTCTCTGAAAATGAAAAATAACAATTAGAAAATGTATCAAATGGAAACATCAACAATATCTGATGCAAAAACAAAATGACACACACGGTTAAGAATATAGCGTGATGCCTCATTTATTTTTTTTATAAATATTGTAAGAAGTTAGCTTGCCCAGTTTGTTACTACATCTGCACAGTCCAGAAAAAGGTGTGGTTTTCTAGGTTCCAATAAGAAACTCTTTTCGAGTCAGCAGGACATGTATAACCCCCAGGGCCCTGTGGTGCATGCCACTTTCTAGAGAAGGTGGAGCAGTTGATGTTCGTTTCAGACCAATATACTGACTTCAGGGAATGCAGATGTATCACTATTCGCATTTAAAATGTATGACAAATGAGCTCAAAAGACCACCTTTAGTTATCTGCAGCATCATAAGCATTGAATTATTTTCAATGCTAAATATAAGAGAAGCATCTTTATACCTGTGAACCACATTTCGCTCATGGAGATAAACCAATCCGTTGAGAATCTGCCTTGTGTATGCTGACACTTGTGAGTCTCGTAGTTTATACTTTTGATAGAGGGACGATAGAGAACCTTGTGTAACAAGCTCAATAAAAATGTACAGTTTTGATTCTTCCTGCATTAGAAGTGTTGAATGAATTACATGAGTAATGGACATCATTACAAACATACATGAATGAAAAAAAAAAGTGTATATTGTGTATTGACTGCTTACATAAAACTATTTCTAGAACTGAATCAATAACTGAGTAACATCAAAAGAACAGTGGGGGTACCTTGTCAGTTCCATAATACTGGACTATATTTTCATGTTCAAACTGACTTAGGAGTGCAATTTCCTGAGAACCCAACAACTCAAAATTAGATAGTTTCAGAAGATGCCAAAGCATGTCAAAGCGGTACAATATAGTAAAGACAACAGTACAACATTAGAACAGTGGTATTCACAATAAAAATCAACTGTAACAGATGAAGAACCGCAGCAAAAAAACCTGTTCAAGTGCAAGAATAGATTGTTGTGCGTTGCTTCCTTGGTCAAGCAAAGATACTTCCTTCACAGCAAAAAACGCTCCTTCACTGTAAAGACATTCAACACGGACATCATTTAATGTTTTTAAATACATCGCATGCTCTTCAAATGGTACAGCAACAAGAAAGAATAATATCCTTTACACTACTCTAAGCGACTAGACTGAAGTTTTAATATAACCAGGTGAAAAATATGTTCTATCTCAGTCCTAAGAACTTACAACCTGAAGCCATTAGGTTCCAATAATATTTCACTGTATATGCATAATCAAGTCTTCACAATGTTGCAACTTGCAGCTACCATGGTCCTTTCCTCATGACATTGTAGCCTTTGTAGCACAAATGCAAAATGCTGCCTATTTGAGAGTACTATAGCAAAGTAGTTGGGTACTACCGTTGTTGATTTTTATCAGGCATATTTTAATTTCAAAAAGTCTTCAAGAGTAAATTTTGAGCATGATTTCTCATAATCTATAAAACCAATATTGTACAAAAGCACTTTGAAATGTGAATCTGTTTGATATAATTTTTAGACATTAAATATACTTGTAATTTGACTAACTGTTGGTCAGAATCTACAATTTTTGACTTTTTAAAATCAAAATACTCCCAATCGAAATCAATGGCCGAGTATCAATCAAATTCAGTCATTAAAGGTCAGAGCATGTACTTTATGCCATTGTTATGACTGAAGGGATTAAGTCAAATAAAAATATTTTCTCCCTTCAGTTCTCATGGCATAATCATTCAAAAAATAAATTATGATGCAACAGTAAAACCTCCAGCGCATATCTGTCGACTGGCTACAGAAAGGGCAATCTATATGGACTGCTGAATGAATAATGCCCATACCCACATTGCATTGACAAGTCACACCAGGACAAAAGAGTAGAAAATGTAGCACCAGGAGATAAATTCATACAAAATGTAGCACCAGGGCATAAGACTAAAGGAGCTGTGTTTTAGAATATTATAATTTCAGACCATGTCAACAATACGTTCCTGTCGTGTGAGGGAAATGATTTAACAACACCAAATCAATACATGGCAGAACTGTGCTGGGTTTTTCCTATAACTGGCCCCGTTCGTTGCTTCAAGTTGGAGCAAAATTTTCCGCGCATGCAAAACGAAAAGGCTCAATAACATACGATTAATTAAGTATTAACTATCATAAATTATGGATTTATTTGATTTTATAAAACAACTTCTATATAGATTTTTTTTTTTTGAAAAACACACACCATTTAACAGTTTGAAAAGCGTGCTAACGGAAAACGAGGAAGTTCAAGGTTAAAGTTGAAGAAAAGAACTAAGCCACAGGTCTAAGGGCGACAGAATGGTATTCTTGTCCCACTCCCAATCACCCCAGTACCAACACACTACACAGACATTCCCAAATAAATATTTGACATTCTAGTATTCTACTTGTAGAATTCATTATATAACAGCATGCACTTCTAAGTTTTAGGTAATAAAAAAAAGAGCCTTGCCCATCTTCTAACGAGGGGATTGTTTGGACTAGCTAAGATTTATCTTTCATGAAAATAACTGTAAGCTAAGGCCAGCTATGACATAACAGTCTATTTTTAAAATATGCTTAAATTAGACAAAAGATTGCAGTACCCTGTGATAAGTAGTACTAGTAGCAAAGATGATATGGGCAAACACCAAATAAAAACTAAAGCATTATTAGTACTTACTCACTGATGCCCTCATACACCATCCCAAATGAGCCGCTCCCCAGAAGAGCACCACGCATCCACGACTTAATCTTCCTCTTGAACTTTCCATTTGGTGAGATGATGAACATAGCCTCCGTAGTTGTGCTGGATGCATCATCATCATTTGTTGTTGACAATGATGATGTCCCAGTGAACCCTTCAAAGGTCTCTCCTATCCTTAACTCTTTCAGCTCCCCGTCCACCCCTGCCACTCCCTCGTCAGCAAACTCCTCCTCCTCGGTGTCCGACATGTGAGACGCGTCCACGCGTTCATCATCTGTTCTCACTTCACTTTTCTCTTCACTGGGAGCAAACGAGTTCACAATATCCCAAGCCGACACCCCGCTCATGTCTTTAGCCACAATTGAACGCCTCATTGGCGGCGGTGCGAGTGCCATGAGCGGCTGAGGCGGGGAGAGCACAGGAGGTCGGGCTCCTCGGATACCGACTTCGCCGCCTCCTCTCTTTGGCGATAGCAGGGGCAATCCAGCGAGGGGTTCCACAGCAGCAACGGCAGGGGCAGCCTTGGGGGATTCCTGACCGAGCGCCGCAGCGGTAGGCTCCTCCGCCGAATCAGTTGCGGTGGAATTGGAGGAAGAATTGAGGGACTCCTCAGGAATTGAAGCAGGGAATGAGGGAGGAAGGTCGCACTGGATGACCTCGGGGGCGGAAATGGTGCGGGCCATGGGAGAGGGGTCGTCGACGGGTGGCGAGGAGACGAAGCGGGAGCGCGGTAGTAGGTCGGAGTTAGAACGCTCTTTCCGGGCTTCCCATGCGGCGACGGGGATCGCGAACTCCTCCGGCCCCGATAAACCCAGGCTGCGGCACAGCTCGTCGACCTCCCCCTCCACGCTGCCGCTGATGCGGATGTCCGTGCCGCCGCCCCCGACGGCCAGGTCGAGCGAGCGCGACGGCCGGAGCCCCAGCGACCGGTCCGCCGACATGGACGACGACCACGACGCGCACGCCGGCACGGACGACGCCCCCGCCCCCGCCCCCGCCCCCGCCGCCTCGTAGTCGATGTGCTTCACCGCGTTGCGGCGCTCCAGCCGCGAGCTACGCCCGCGGCTCCCGCTTCCGCTCCCTTCCCCTCCGCCGCCGCGGCTGCTGGAGTCCATCGACGACGCGTCCGCGCCGCGGCGGCCGGAGGAGGACGACTGCTTACGGCTCCACGAGAACATCTGGATCCATAAGACAACTGAATCCTCGCCTAGATGCTCGGCTCCATGGTGGCGCCGCCGCCGCCGCGTAATCCCTCCGGGATCCAAGCTCAATTCCGCAGCAGCCACCGCCTCGCCTCGCCTCGCCTCGCGCCGTGTGATTTGTGGGGAGATTGGGAGCTCGCCTCGGCTTCTCGCGGGAT
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| CDS seq | ATGTTCTCGTGGAGCCGTAAGCAGTCGTCCTCCTCCGGCCGCCGCGGCGCGGACGCGTCGTCGATGGACTCCAGCAGCCGCGGCGGCGGAGGGGAAGGGAGCGGAAGCGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTACGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTGGTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCTGGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGACGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGCATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCCGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGAACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGCATTAA
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| Protein seq | MFSWSRKQSSSSGRRGADASSMDSSSRGGGGEGSGSGSRGRSSRLERRNAVKHIDYEAAGAGAGAGASSVPACASWSSSMSADRSLGLRPSRSLDLAVGGGGTDIRISGSVEGEVDELCRSLGLSGPEEFAIPVAAWEARKERSNSDLLPRSRFVSSPPVDDPSPMARTISAPEVIQCDLPPSFPASIPEESLNSSSNSTATDSAEEPTAAALGQESPKAAPAVAAVEPLAGLPLLSPKRGGGEVGIRGARPPVLSPPQPLMALAPPPMRRSIVAKDMSGVSAWDIVNSFAPSEEKSEVRTDDERVDASHMSDTEEEEFADEGVAGVDGELKELRIGETFEGFTGTSSLSTTNDDDASSTTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFAVKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDKEESKLYIFIELVTQGSLSSLYQKYKLRDSQVSAYTRQILNGLVYLHERNVVHRDIKCANILVHANGSVKLADFGLAKEMSKINMLRSCKGSVYWMAPEVVNPKKTYGPQADIWSLGCTVLEMLTRNIPYPNVEWH |
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| Function | Mitogen-activated protein kinase kinase kinase 1 [UniProtKB/Swiss-Prot:Q39008] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0487500 | OsMH63_03T0487500-mRNA-1 | Chr03 | 31367561 | 31372233 | - | maker | ||
| CDS seq | ATGTTCTCGTGGAGCCGTAAGCAGTCGTCCTCCTCCGGCCGCCGCGGCGCGGACGCGTCGTCGATGGACTCCAGCAGCCGCGGCGGCGGAGGGGAAGGGAGCGGAAGCGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTACGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTGGTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCTGGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGACGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGCATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCCGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGAACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGCATTAA
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| Protein seq | MFSWSRKQSSSSGRRGADASSMDSSSRGGGGEGSGSGSRGRSSRLERRNAVKHIDYEAAGAGAGAGASSVPACASWSSSMSADRSLGLRPSRSLDLAVGGGGTDIRISGSVEGEVDELCRSLGLSGPEEFAIPVAAWEARKERSNSDLLPRSRFVSSPPVDDPSPMARTISAPEVIQCDLPPSFPASIPEESLNSSSNSTATDSAEEPTAAALGQESPKAAPAVAAVEPLAGLPLLSPKRGGGEVGIRGARPPVLSPPQPLMALAPPPMRRSIVAKDMSGVSAWDIVNSFAPSEEKSEVRTDDERVDASHMSDTEEEEFADEGVAGVDGELKELRIGETFEGFTGTSSLSTTNDDDASSTTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFAVKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDKEESKLYIFIELVTQGSLSSLYQKYKLRDSQVSAYTRQILNGLVYLHERNVVHRDIKCANILVHANGSVKLADFGLAKEMSKINMLRSCKGSVYWMAPEVVNPKKTYGPQADIWSLGCTVLEMLTRNIPYPNVEWH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 10.7030505 | 38.3075885 | 18.387346 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0703400 | RBH | 2.767633 | 2.488112 | 3.900927 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g49640 | RBH | 1.770751 | 1.598468 | 0.974536 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0703400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0031540 | RBH | 1.013972 | 9.967955 | 4.326412 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0031240 | RBH | 0.578581 | 2.709418 | 1.369505 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0031330 | RBH | 1.702398 | 8.105046 | 6.260842 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0031420 | RBH | 0.224986 | 0.275400 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0031120 | RBH | 8.918638 | 8.594539 | 14.615534 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0030790 | RBH | 0.202113 | 0.719599 | 1.142843 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0487300 | RBH | 12.6673935 | 41.3392795 | 16.557063 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0031180 | RBH | 0.369843 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0031230 | RBH | 0.645592 | 11.746877 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0031190 | RBH | 10.789871 | 15.331034 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0030950 | RBH | 0.986884 | 0.602591 | 0.982718 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0030980 | RBH | 0.656076 | 3.580368 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G030970 | RBH | 0.764008 | 2.354995 | 1.242042 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0030830 | RBH | 2.773051 | 27.019495 | 6.592595 |
