Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0482300 | OGI:03078970 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:31066470-31070251 | ||||||||
| Gene Symbol | C3H24, OsC3H24, OsTZF3, TZF3, OsCCCH-Zn-8, CCCH-Zn-8 | ||||||||||
| DNA seq | AAAGAGAGTGCGTACTGCGGGAACTCCGAAAGTCTCCACACCCACCACTCGCTTTCTCTCTCATCACTTTCCCCTTTTTTTACTGCCCCCCTTCTTCCCCCACCCCCTCTCGCTCTCTCTCGCTTCCGCGCCCCATGCTTCTCCTCCCCCAGCAATCGCGAGAAGCAGGCTAGATCAGGGCGCGCGGTCTTTGCCTTCTCCCCCGAACGCCTCGGCAAGCGAGAGGCGCGCGCCGTTCTTGGTTGGGAGGTTTGTGGGATTCTTTTATTTGTTTTTATAGCGGGATCTTTGGTGCTTTCTTTCCCCCCCGATTTGCCTCGCCATGGGGGCTGCGGAGATCTTCGGGCCGATTCGGTCGATGCTGGCGTGGTGAGATGGTTTGCCGCATCGCGAGCTGCTGCTGCTGCTGCGAGGTTATTAAGGTCAGTTTGGGGCTTTCCCTTTTCTGCTCCCTCCGATCTAGCGGGTGGTGTTTTTTTTGCTTTGCGTTTCTTGGCTCGGTGGAGGTCTCATGGTCTAAGGGGAAGATTTGGGGTTTTTGGGAGGAGATTTTTGGTGGGGTTTTGGGGGGATTTGTTTGCGTGTTTACGCTTCCATTTTTGTAGCGTCGGTTCTGGTTATGTGCATCCGATTCGGTTGGTTTCTAGTCCATTTCTTGTGCTGTTTTTGGACTCCCTTGACTGGTTTCTTGACTGATGTTTTTGCTGATGGCTTCAGTTCTTCCGATCCGACAAGCCCCGATGAACGGCACGCCGATCTCCGCGTCCGCCGCGGCCGGCGTCGACGGAGTCGGCGCGGCGGTGGCGCTGGCGGCCGCGACCAAGAAGAGTGCCGCCGCGGCGGCCGCCGTCGCCGAGATGGCGAAAACCCTCACCGTCGACACGGACGACGCCTTCGCGGGGCTCCTCGAGCTCGCCGCGGACGACGACGCGGAGGGCCTGCGCCGCGCGCTGGAGCGCGCCCCGCCCGCCGCCGCGGACGAGGCGGGCCTCTGGTACGGCCGCCGCAAGGTCCTCGAGCACCGCACGCCGCTGATGGTCGCGGCCACCTATGGCAGCCTCGCGGTGCTTCGCCTGCTGCTGTCCCTCCCGTCCGTCGATGTCAATCGCCGCTGTGGCTCCGACGGCACCACCGCCCTCCACTGTGCGGCGTCTGGTGGCTCGCCGTCTTGTGTGGAGGCCGTCAAGCTGCTGCTTGCTGCTGGGGCTGATGCTGATGCCACGGATGCTTCCGGATATCGTCCAGCTGATGTGATCTCTGTTCCTCCAAAGATGTTTGACGCCAAGATTGCCCTCCAAGATCTTCTTGGATGCCCAAAGGCTGGGCATGGCGTTCTCCGGGTGGTGACAAGGGCCGCAAACTCTATGTTGTCACCTGTATCATCCCCTACAGCAGAAGATGCACGATCTCCATCTGCTGCTGTGATGATGACGACAAAGTTTGCAGATCTTCCAAGGGTTGTGACATCGGAAAAGAAAGAATATCCAGTGGATCCGTCCCTTCCTGATATCAAGAACAGCATCTATGCTTCCGATGAGTTCCGCATGTACTCATTTAAGATCAGGCCATGCTCGCGGGCGTACTCACATGATTGGACTGAGTGCCCGTTTGTTCACCCAGGGGAGAACGCACGGCGTCGGGACCCTCGCAAGTATCACTACAGCTGTGTGCCATGCCCTGACTTTAGAAAGGGAGTTTGCCGGCGTGGTGACATGTGTGAATATGCTCATGGCGTGTTCGAGTGTTGGCTCCATCCAGCACAGTACCGTACTCGCCTTTGCAAGGATGGCACAAGCTGTAATCGCCGTGTCTGTTTCTTTGCGCATACAACTGATGAGCTCCGACCACTATATGTTTCCACTGGATCTGCAGTACCATCCCCAAGAGCCTCGGCAACAGCTACAATGGAGATGGCTGCAGCAATGGGCTTGATGCCTGGTTCTCCATCATCAGTTTCAGCAGTCATGTCCCCATTTACACCACCAATGTCCCCTTCAGGCAATGGGATGCCCCCTTCATTGGGCTGGCAGCAGCCAAATGTTCCGACACTACACCTTCCAGGCAGCAGCCTTCAGTCGAGCCGGCTCCGTACCTCACTTAGTGCAAGGGATATGCCTGCTGATGATTACTCCCTGGTGCAGGATATTGATTCACAGCTTATAAATGATTTGTGCTATTCACGTATTGGTTCATCAACAGGAAACCACAGGTCTCGGACCAAGTCCCTAAATCCGTCAAACTTGGATGATCTCTTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAATCAGTTCCAGCAACAGCAGCAGGCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCACTTGGTATATCCTCCCCTGGCCGCATGTCTCCTCGATGTGTTGAATCTGGGTCCCCTATGAACTCTCACCTTGCTGCTGCTCTTGCTCAGCGTGAGAAGCAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGATCTTGGGCCGAGTGCTGCAAGAGCATCAGGTGTTGTTGGCTCCCCTCTAAGCTCATCATGGTCAAAGTGGGGATCACCTTCAGGGACACCAGACTGGGGTGTTAATGGTGAAGAATTGGGCAAGCTTCGCCGGTCATCATCGTTTGAGCTGAGATCTGGTGGTGATGATCCAGATCTCTCTTGGGTACACACACTGGTTAAGGAATCTCCACCAGAGAAGCAAGTCACTACTGCTGAATCCATAAACTCTGTTGGACCTTCACCACTGATGCCTCCCAGTGTAAGCAACGGTGAAGGTCCTAGTCTGAATGCCCCGCTGGATGGGCATGACCAAGCTGCTGTTATTGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCATATTGGTAGTCTAGCAACATAAGCGCTGAATGAGCCTGGAAAGTGCAAGGAGTTATTATTCTTAGTTAATGAATTTGGAGTAATTTTTTTCCTGTTCATTAAGATGGTCAACAAGCAAAAGGATGGATAGCTGATGGTGGTGATTCAGAGATTGGTTTTCTTTACTTTATTGAGGTAAATCATATACATTATTGAGGTTCCAGTAGGTTGAAAGATTGAAGTACCTTGATTGGGGTCGTTTCAAGACCGACCCAGGTAGAATCGCACCCCGGCAGCTTCAATTCATCGGTCAAAAATATTTCCCTGTTTTGTTAATTAACCCCGTTATAAAAGAAGACTCGTTTGGTGTTTCGGAATTCTTTTCTTTACCTTAGCGGTGTTTATTTTGTTTATTATGATATTGATACTTGATGTACTGATGGGTATAAGGTTGGTTACCAGGCATGCTATAGTAGTATATCAAGTCCCAAAGTATTCTTTTTCTCCCTTTCACCATTTGTCGAGGATCATACTATGGCCTTGTTTTGGTCAGATCTTGAGGCCTTTATAATCCTTGGATTTGTAATAATGTAATATTGTCATTGAACTTACATTGCTATTGTTTTGCAATCGCAAATCTCGCTCATCAGAATTGTTTCCACCTGTGCTTTTGATAAATGTGTTCTTGAGATGAATACTGAGGCAAATGGTTAGTGGCAGCTGCTGTCTGCTCAGCACTCAGCAAAGTCAGCAGCCACTCAGCAGAAACTAGGCTGCATGGTGTGCTAAGGTAGGTGGCAGGTGGCTTAACCTGCGCACGCGCGTGACGTCGCAC
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| CDS seq | ATGTTTTTGCTGATGGCTTCAGTTCTTCCGATCCGACAAGCCCCGATGAACGGCACGCCGATCTCCGCGTCCGCCGCGGCCGGCGTCGACGGAGTCGGCGCGGCGGTGGCGCTGGCGGCCGCGACCAAGAAGAGTGCCGCCGCGGCGGCCGCCGTCGCCGAGATGGCGAAAACCCTCACCGTCGACACGGACGACGCCTTCGCGGGGCTCCTCGAGCTCGCCGCGGACGACGACGCGGAGGGCCTGCGCCGCGCGCTGGAGCGCGCCCCGCCCGCCGCCGCGGACGAGGCGGGCCTCTGGTACGGCCGCCGCAAGGTCCTCGAGCACCGCACGCCGCTGATGGTCGCGGCCACCTATGGCAGCCTCGCGGTGCTTCGCCTGCTGCTGTCCCTCCCGTCCGTCGATGTCAATCGCCGCTGTGGCTCCGACGGCACCACCGCCCTCCACTGTGCGGCGTCTGGTGGCTCGCCGTCTTGTGTGGAGGCCGTCAAGCTGCTGCTTGCTGCTGGGGCTGATGCTGATGCCACGGATGCTTCCGGATATCGTCCAGCTGATGTGATCTCTGTTCCTCCAAAGATGTTTGACGCCAAGATTGCCCTCCAAGATCTTCTTGGATGCCCAAAGGCTGGGCATGGCGTTCTCCGGGTGGTGACAAGGGCCGCAAACTCTATGTTGTCACCTGTATCATCCCCTACAGCAGAAGATGCACGATCTCCATCTGCTGCTGTGATGATGACGACAAAGTTTGCAGATCTTCCAAGGGTTGTGACATCGGAAAAGAAAGAATATCCAGTGGATCCGTCCCTTCCTGATATCAAGAACAGCATCTATGCTTCCGATGAGTTCCGCATGTACTCATTTAAGATCAGGCCATGCTCGCGGGCGTACTCACATGATTGGACTGAGTGCCCGTTTGTTCACCCAGGGGAGAACGCACGGCGTCGGGACCCTCGCAAGTATCACTACAGCTGTGTGCCATGCCCTGACTTTAGAAAGGGAGTTTGCCGGCGTGGTGACATGTGTGAATATGCTCATGGCGTGTTCGAGTGTTGGCTCCATCCAGCACAGTACCGTACTCGCCTTTGCAAGGATGGCACAAGCTGTAATCGCCGTGTCTGTTTCTTTGCGCATACAACTGATGAGCTCCGACCACTATATGTTTCCACTGGATCTGCAGTACCATCCCCAAGAGCCTCGGCAACAGCTACAATGGAGATGGCTGCAGCAATGGGCTTGATGCCTGGTTCTCCATCATCAGTTTCAGCAGTCATGTCCCCATTTACACCACCAATGTCCCCTTCAGGCAATGGGATGCCCCCTTCATTGGGCTGGCAGCAGCCAAATGTTCCGACACTACACCTTCCAGGCAGCAGCCTTCAGTCGAGCCGGCTCCGTACCTCACTTAGTGCAAGGGATATGCCTGCTGATGATTACTCCCTGGTGCAGGATATTGATTCACAGCTTATAAATGATTTGTGCTATTCACGTATTGGTTCATCAACAGGAAACCACAGGTCTCGGACCAAGTCCCTAAATCCGTCAAACTTGGATGATCTCTTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAATCAGTTCCAGCAACAGCAGCAGGCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCACTTGGTATATCCTCCCCTGGCCGCATGTCTCCTCGATGTGTTGAATCTGGGTCCCCTATGAACTCTCACCTTGCTGCTGCTCTTGCTCAGCGTGAGAAGCAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGATCTTGGGCCGAGTGCTGCAAGAGCATCAGGTGTTGTTGGCTCCCCTCTAAGCTCATCATGGTCAAAGTGGGGATCACCTTCAGGGACACCAGACTGGGGTGTTAATGGTGAAGAATTGGGCAAGCTTCGCCGGTCATCATCGTTTGAGCTGAGATCTGGTGGTGATGATCCAGATCTCTCTTGGGTACACACACTGGTTAAGGAATCTCCACCAGAGAAGCAAGTCACTACTGCTGAATCCATAAACTCTGTTGGACCTTCACCACTGATGCCTCCCAGTGTAAGCAACGGTGAAGGTCCTAGTCTGAATGCCCCGCTGGATGGGCATGACCAAGCTGCTGTTATTGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCATATTGGTAGTCTAGCAACATAA
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| Protein seq | MFLLMASVLPIRQAPMNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLTVDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLVQDIDSQLINDLCYSRIGSSTGNHRSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT |
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| Function | Zinc finger CCCH domain-containing protein 24 [UniProtKB/Swiss-Prot:Q10EL1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0482300 | OsMH63_03T0482300.1 | Chr03 | 31066470 | 31070251 | + | maker | ||
| CDS seq | ATGAACGGCACGCCGATCTCCGCGTCCGCCGCGGCCGGCGTCGACGGAGTCGGCGCGGCGGTGGCGCTGGCGGCCGCGACCAAGAAGAGTGCCGCCGCGGCGGCCGCCGTCGCCGAGATGGCGAAAACCCTCACCGTCGACACGGACGACGCCTTCGCGGGGCTCCTCGAGCTCGCCGCGGACGACGACGCGGAGGGCCTGCGCCGCGCGCTGGAGCGCGCCCCGCCCGCCGCCGCGGACGAGGCGGGCCTCTGGTACGGCCGCCGCAAGGTCCTCGAGCACCGCACGCCGCTGATGGTCGCGGCCACCTATGGCAGCCTCGCGGTGCTTCGCCTGCTGCTGTCCCTCCCGTCCGTCGATGTCAATCGCCGCTGTGGCTCCGACGGCACCACCGCCCTCCACTGTGCGGCGTCTGGTGGCTCGCCGTCTTGTGTGGAGGCCGTCAAGCTGCTGCTTGCTGCTGGGGCTGATGCTGATGCCACGGATGCTTCCGGATATCGTCCAGCTGATGTGATCTCTGTTCCTCCAAAGATGTTTGACGCCAAGATTGCCCTCCAAGATCTTCTTGGATGCCCAAAGGCTGGGCATGGCGTTCTCCGGGTGGTGACAAGGGCCGCAAACTCTATGTTGTCACCTGTATCATCCCCTACAGCAGAAGATGCACGATCTCCATCTGCTGCTGTGATGATGACGACAAAGTTTGCAGATCTTCCAAGGGTTGTGACATCGGAAAAGAAAGAATATCCAGTGGATCCGTCCCTTCCTGATATCAAGAACAGCATCTATGCTTCCGATGAGTTCCGCATGTACTCATTTAAGATCAGGCCATGCTCGCGGGCGTACTCACATGATTGGACTGAGTGCCCGTTTGTTCACCCAGGGGAGAACGCACGGCGTCGGGACCCTCGCAAGTATCACTACAGCTGTGTGCCATGCCCTGACTTTAGAAAGGGAGTTTGCCGGCGTGGTGACATGTGTGAATATGCTCATGGCGTGTTCGAGTGTTGGCTCCATCCAGCACAGTACCGTACTCGCCTTTGCAAGGATGGCACAAGCTGTAATCGCCGTGTCTGTTTCTTTGCGCATACAACTGATGAGCTCCGACCACTATATGTTTCCACTGGATCTGCAGTACCATCCCCAAGAGCCTCGGCAACAGCTACAATGGAGATGGCTGCAGCAATGGGCTTGATGCCTGGTTCTCCATCATCAGTTTCAGCAGTCATGTCCCCATTTACACCACCAATGTCCCCTTCAGGCAATGGGATGCCCCCTTCATTGGGCTGGCAGCAGCCAAATGTTCCGACACTACACCTTCCAGGCAGCAGCCTTCAGTCGAGCCGGCTCCGTACCTCACTTAGTGCAAGGGATATGCCTGCTGATGATTACTCCCTGGTGCAGGATATTGATTCACAGCTTATAAATGATTTGTGCTATTCACGTATTGGTTCATCAACAGGAAACCACAGGTCTCGGACCAAGTCCCTAAATCCGTCAAACTTGGATGATCTCTTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAATCAGTTCCAGCAACAGCAGCAGGCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCACTTGGTATATCCTCCCCTGGCCGCATGTCTCCTCGATGTGTTGAATCTGGGTCCCCTATGAACTCTCACCTTGCTGCTGCTCTTGCTCAGCGTGAGAAGCAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGATCTTGGGCCGAGTGCTGCAAGAGCATCAGGTGTTGTTGGCTCCCCTCTAAGCTCATCATGGTCAAAGTGGGGATCACCTTCAGGGACACCAGACTGGGGTGTTAATGGTGAAGAATTGGGCAAGCTTCGCCGGTCATCATCGTTTGAGCTGAGATCTGGTGGTGATGATCCAGATCTCTCTTGGGTACACACACTGGTTAAGGAATCTCCACCAGAGAAGCAAGTCACTACTGCTGAATCCATAAACTCTGTTGGACCTTCACCACTGATGCCTCCCAGTGTAAGCAACGGTGAAGGTCCTAGTCTGAATGCCCCGCTGGATGGGCATGACCAAGCTGCTGTTATTGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCATATTGGTAGTCTAGCAACATAA
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| Protein seq | MNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLTVDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLVQDIDSQLINDLCYSRIGSSTGNHRSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0482300 | OsMH63_03T0482300.2 | Chr03 | 31066481 | 31070077 | + | maker | ||
| CDS seq | ATGAACGGCACGCCGATCTCCGCGTCCGCCGCGGCCGGCGTCGACGGAGTCGGCGCGGCGGTGGCGCTGGCGGCCGCGACCAAGAAGAGTGCCGCCGCGGCGGCCGCCGTCGCCGAGATGGCGAAAACCCTCACCGTCGACACGGACGACGCCTTCGCGGGGCTCCTCGAGCTCGCCGCGGACGACGACGCGGGCCTCTGGTACGGCCGCCGCAAGGTCCTCGAGCACCGCACGCCGCTGATGGTCGCGGCCACCTATGGCAGCCTCGCGGTGCTTCGCCTGCTGCTGTCCCTCCCGTCCGTCGATGTCAATCGCCGCTGTGGCTCCGACGGCACCACCGCCCTCCACTGTGCGGCGTCTGGTGGCTCGCCGTCTTGTGTGGAGGCCGTCAAGCTGCTGCTTGCTGCTGGGGCTGATGCTGATGCCACGGATGCTTCCGGATATCGTCCAGCTGATGTGATCTCTGTTCCTCCAAAGATGTTTGACGCCAAGATTGCCCTCCAAGATCTTCTTGGATGCCCAAAGGCTGGGCATGGCGTTCTCCGGGTGGTGACAAGGGCCGCAAACTCTATGTTGTCACCTGTATCATCCCCTACAGCAGAAGATGCACGATCTCCATCTGCTGCTGTGATGATGACGACAAAGTTTGCAGATCTTCCAAGGGTTGTGACATCGGAAAAGAAAGAATATCCAGTGGATCCGTCCCTTCCTGATATCAAGAACAGCATCTATGCTTCCGATGAGTTCCGCATGTACTCATTTAAGATCAGGCCATGCTCGCGGGCGTACTCACATGATTGGACTGAGTGCCCGTTTGTTCACCCAGGGGAGAACGCACGGCGTCGGGACCCTCGCAAGTATCACTACAGCTGTGTGCCATGCCCTGACTTTAGAAAGGGAGTTTGCCGGCGTGGTGACATGTGTGAATATGCTCATGGCGTGTTCGAGTGTTGGCTCCATCCAGCACAGTACCGTACTCGCCTTTGCAAGGATGGCACAAGCTGTAATCGCCGTGTCTGTTTCTTTGCGCATACAACTGATGAGCTCCGACCACTATATGTTTCCACTGGATCTGCAGTACCATCCCCAAGAGCCTCGGCAACAGCTACAATGGAGATGGCTGCAGCAATGGGCTTGATGCCTGGTTCTCCATCATCAGTTTCAGCAGTCATGTCCCCATTTACACCACCAATGTCCCCTTCAGGCAATGGGATGCCCCCTTCATTGGGCTGGCAGCAGCCAAATGTTCCGACACTACACCTTCCAGGCAGCAGCCTTCAGTCGAGCCGGCTCCGTACCTCACTTAGTGCAAGGGATATGCCTGCTGATGATTACTCCCTGGTGCAGGATATTGATTCACAGCTTATAAATGATTTGTGCTATTCACGTATTGGTTCATCAACAGGAAACCACAGGTCTCGGACCAAGTCCCTAAATCCGTCAAACTTGGATGATCTCTTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAATCAGTTCCAGCAACAGCAGCAGGCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCACTTGGTATATCCTCCCCTGGCCGCATGTCTCCTCGATGTGTTGAATCTGGGTCCCCTATGAACTCTCACCTTGCTGCTGCTCTTGCTCAGCGTGAGAAGCAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGATCTTGGGCCGAGTGCTGCAAGAGCATCAGGTGTTGTTGGCTCCCCTCTAAGCTCATCATGGTCAAAGTGGGGATCACCTTCAGGGACACCAGACTGGGGTGTTAATGGTGAAGAATTGGGCAAGCTTCGCCGGTCATCATCGTTTGAGCTGAGATCTGGTGGTGATGATCCAGATCTCTCTTGGGTACACACACTGGTTAAGGAATCTCCACCAGAGAAGCAAGTCACTACTGCTGAATCCATAAACTCTGTTGGACCTTCACCACTGATGCCTCCCAGTGTAAGCAACGGTGAAGGTCCTAGTCTGAATGCCCCGCTGGATGGGCATGACCAAGCTGCTGTTATTGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCATATTGGTAGTCTAGCAACATAA
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| Protein seq | MNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLTVDTDDAFAGLLELAADDDAGLWYGRRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLVQDIDSQLINDLCYSRIGSSTGNHRSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0482300 | OsMH63_03T0482300.3 | Chr03 | 31066481 | 31070077 | + | maker | ||
| CDS seq | ATGTGCATCCGATTCGTTCTTCCGATCCGACAAGCCCCGATGAACGGCACGCCGATCTCCGCGTCCGCCGCGGCCGGCGTCGACGGAGTCGGCGCGGCGGTGGCGCTGGCGGCCGCGACCAAGAAGAGTGCCGCCGCGGCGGCCGCCGTCGCCGAGATGGCGAAAACCCTCACCGTCGACACGGACGACGCCTTCGCGGGGCTCCTCGAGCTCGCCGCGGACGACGACGCGGAGGGCCTGCGCCGCGCGCTGGAGCGCGCCCCGCCCGCCGCCGCGGACGAGGCGGGCCTCTGGTACGGCCGCCGCAAGGTCCTCGAGCACCGCACGCCGCTGATGGTCGCGGCCACCTATGGCAGCCTCGCGGTGCTTCGCCTGCTGCTGTCCCTCCCGTCCGTCGATGTCAATCGCCGCTGTGGCTCCGACGGCACCACCGCCCTCCACTGTGCGGCGTCTGGTGGCTCGCCGTCTTGTGTGGAGGCCGTCAAGCTGCTGCTTGCTGCTGGGGCTGATGCTGATGCCACGGATGCTTCCGGATATCGTCCAGCTGATGTGATCTCTGTTCCTCCAAAGATGTTTGACGCCAAGATTGCCCTCCAAGATCTTCTTGGATGCCCAAAGGCTGGGCATGGCGTTCTCCGGGTGGTGACAAGGGCCGCAAACTCTATGTTGTCACCTGTATCATCCCCTACAGCAGAAGATGCACGATCTCCATCTGCTGCTGTGATGATGACGACAAAGTTTGCAGATCTTCCAAGGGTTGTGACATCGGAAAAGAAAGAATATCCAGTGGATCCGTCCCTTCCTGATATCAAGAACAGCATCTATGCTTCCGATGAGTTCCGCATGTACTCATTTAAGATCAGGCCATGCTCGCGGGCGTACTCACATGATTGGACTGAGTGCCCGTTTGTTCACCCAGGGGAGAACGCACGGCGTCGGGACCCTCGCAAGTATCACTACAGCTGTGTGCCATGCCCTGACTTTAGAAAGGGAGTTTGCCGGCGTGGTGACATGTGTGAATATGCTCATGGCGTGTTCGAGTGTTGGCTCCATCCAGCACAGTACCGTACTCGCCTTTGCAAGGATGGCACAAGCTGTAATCGCCGTGTCTGTTTCTTTGCGCATACAACTGATGAGCTCCGACCACTATATGTTTCCACTGGATCTGCAGTACCATCCCCAAGAGCCTCGGCAACAGCTACAATGGAGATGGCTGCAGCAATGGGCTTGATGCCTGGTTCTCCATCATCAGTTTCAGCAGTCATGTCCCCATTTACACCACCAATGTCCCCTTCAGGCAATGGGATGCCCCCTTCATTGGGCTGGCAGCAGCCAAATGTTCCGACACTACACCTTCCAGGCAGCAGCCTTCAGTCGAGCCGGCTCCGTACCTCACTTAGTGCAAGGGATATGCCTGCTGATGATTACTCCCTGGTGCAGGATATTGATTCACAGCTTATAAATGATTTGTGCTATTCACGTATTGGTTCATCAACAGGAAACCACAGGTCTCGGACCAAGTCCCTAAATCCGTCAAACTTGGATGATCTCTTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAATCAGTTCCAGCAACAGCAGCAGGCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCACTTGGTATATCCTCCCCTGGCCGCATGTCTCCTCGATGTGTTGAATCTGGGTCCCCTATGAACTCTCACCTTGCTGCTGCTCTTGCTCAGCGTGAGAAGCAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGATCTTGGGCCGAGTGCTGCAAGAGCATCAGGTGTTGTTGGCTCCCCTCTAAGCTCATCATGGTCAAAGTGGGGATCACCTTCAGGGACACCAGACTGGGGTGTTAATGGTGAAGAATTGGGCAAGCTTCGCCGGTCATCATCGTTTGAGCTGAGATCTGGTGGTGATGATCCAGATCTCTCTTGGGTACACACACTGGTTAAGGAATCTCCACCAGAGAAGCAAGTCACTACTGCTGAATCCATAAACTCTGTTGGACCTTCACCACTGATGCCTCCCAGTGTAAGCAACGGTGAAGGTCCTAGTCTGAATGCCCCGCTGGATGGGCATGACCAAGCTGCTGTTATTGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCATATTGGTAGTCTAGCAACATAA
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| Protein seq | MCIRFVLPIRQAPMNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLTVDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLVQDIDSQLINDLCYSRIGSSTGNHRSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0482300 | OsMH63_03T0482300.4 | Chr03 | 31066481 | 31070077 | + | maker | ||
| CDS seq | ATGTTTTTGCTGATGGCTTCAGTTCTTCCGATCCGACAAGCCCCGATGAACGGCACGCCGATCTCCGCGTCCGCCGCGGCCGGCGTCGACGGAGTCGGCGCGGCGGTGGCGCTGGCGGCCGCGACCAAGAAGAGTGCCGCCGCGGCGGCCGCCGTCGCCGAGATGGCGAAAACCCTCACCGTCGACACGGACGACGCCTTCGCGGGGCTCCTCGAGCTCGCCGCGGACGACGACGCGGAGGGCCTGCGCCGCGCGCTGGAGCGCGCCCCGCCCGCCGCCGCGGACGAGGCGGGCCTCTGGTACGGCCGCCGCAAGGTCCTCGAGCACCGCACGCCGCTGATGGTCGCGGCCACCTATGGCAGCCTCGCGGTGCTTCGCCTGCTGCTGTCCCTCCCGTCCGTCGATGTCAATCGCCGCTGTGGCTCCGACGGCACCACCGCCCTCCACTGTGCGGCGTCTGGTGGCTCGCCGTCTTGTGTGGAGGCCGTCAAGCTGCTGCTTGCTGCTGGGGCTGATGCTGATGCCACGGATGCTTCCGGATATCGTCCAGCTGATGTGATCTCTGTTCCTCCAAAGATGTTTGACGCCAAGATTGCCCTCCAAGATCTTCTTGGATGCCCAAAGGCTGGGCATGGCGTTCTCCGGGTGGTGACAAGGGCCGCAAACTCTATGTTGTCACCTGTATCATCCCCTACAGCAGAAGATGCACGATCTCCATCTGCTGCTGTGATGATGACGACAAAGTTTGCAGATCTTCCAAGGGTTGTGACATCGGAAAAGAAAGAATATCCAGTGGATCCGTCCCTTCCTGATATCAAGAACAGCATCTATGCTTCCGATGAGTTCCGCATGTACTCATTTAAGATCAGGCCATGCTCGCGGGCGTACTCACATGATTGGACTGAGTGCCCGTTTGTTCACCCAGGGGAGAACGCACGGCGTCGGGACCCTCGCAAGTATCACTACAGCTGTGTGCCATGCCCTGACTTTAGAAAGGGAGTTTGCCGGCGTGGTGACATGTGTGAATATGCTCATGGCGTGTTCGAGTGTTGGCTCCATCCAGCACAGTACCGTACTCGCCTTTGCAAGGATGGCACAAGCTGTAATCGCCGTGTCTGTTTCTTTGCGCATACAACTGATGAGCTCCGACCACTATATGTTTCCACTGGATCTGCAGTACCATCCCCAAGAGCCTCGGCAACAGCTACAATGGAGATGGCTGCAGCAATGGGCTTGATGCCTGGTTCTCCATCATCAGTTTCAGCAGTCATGTCCCCATTTACACCACCAATGTCCCCTTCAGGCAATGGGATGCCCCCTTCATTGGGCTGGCAGCAGCCAAATGTTCCGACACTACACCTTCCAGGCAGCAGCCTTCAGTCGAGCCGGCTCCGTACCTCACTTAGTGCAAGGGATATGCCTGCTGATGATTACTCCCTGGTGCAGGATATTGATTCACAGCTTATAAATGATTTGTGCTATTCACGTATTGGTTCATCAACAGGAAACCACAGGTCTCGGACCAAGTCCCTAAATCCGTCAAACTTGGATGATCTCTTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAATCAGTTCCAGCAACAGCAGCAGGCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCACTTGGTATATCCTCCCCTGGCCGCATGTCTCCTCGATGTGTTGAATCTGGGTCCCCTATGAACTCTCACCTTGCTGCTGCTCTTGCTCAGCGTGAGAAGCAACAGCAGACAATGAGAAGTCTCAGTTCTCGTGATCTTGGGCCGAGTGCTGCAAGAGCATCAGGTGTTGTTGGCTCCCCTCTAAGCTCATCATGGTCAAAGTGGGGATCACCTTCAGGGACACCAGACTGGGGTGTTAATGGTGAAGAATTGGGCAAGCTTCGCCGGTCATCATCGTTTGAGCTGAGATCTGGTGGTGATGATCCAGATCTCTCTTGGGTACACACACTGGTTAAGGAATCTCCACCAGAGAAGCAAGTCACTACTGCTGAATCCATAAACTCTGTTGGACCTTCACCACTGATGCCTCCCAGTGTAAGCAACGGTGAAGGTCCTAGTCTGAATGCCCCGCTGGATGGGCATGACCAAGCTGCTGTTATTGGAGCATTGCTTGAACAGATGCAGCTTGATCAGCATATTGGTAGTCTAGCAACATAA
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| Protein seq | MFLLMASVLPIRQAPMNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLTVDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSLVQDIDSQLINDLCYSRIGSSTGNHRSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFSPSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 8.74274 | 60.9908715 | 22.223177 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0698800 | RBH | 2.088945 | 3.451113 | 7.452010 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g49170 | RBH | 1.396088 | 2.278339 | 1.880342 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0698800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0031150 | RBH | 0.839823 | 14.539588 | 10.361513 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0030860 | RBH | 0.391701 | 6.807759 | 5.152039 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0030950 | RBH | 1.647699 | 12.160038 | 10.200787 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0031050 | RBH | 0.107653 | 0.445281 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0030700 | RBH | 3.965279 | 26.260031 | 30.364828 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0030390 | RBH | 0.427921 | 1.079451 | 2.919845 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0482500 | RBH | 11.8276935 | 51.5949075 | 29.3816595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0030770 | RBH | 0.412975 | 0.510128 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0030830 | RBH | 0.478299 | 17.717188 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0030780 | RBH | 14.500670 | 28.973782 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0030570 | RBH | 0.590750 | 1.369045 | 2.153619 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0030600 | RBH | 0.463756 | 5.955382 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G030540 | RBH | 0.284818 | 5.310617 | 3.813603 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0030450 | RBH | 1.211834 | 33.375450 | 10.138756 |
