Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0166500 | OGI:03026530 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:10055650-10055935 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTATATAACTGATCCAGCTAAATCGCTGGTCACCAGTCGTTCCATCCCAGGCGGGCAGCCTGTCCAGGAGGAAGCGTCCTGAAAGGTTACAACCCAAAGCAGCTAATTCATGCGCTACCTTATTACAGTTTCGTGGGCAGTAACTAACAGAGAAAGAATGAAAACAGCTAGCAATCACATGCTTGATCTCAAGGATTACTCCACCCATCACTGATAAGTTGAAAGAGTTGCTCTGGAGTGCATTGCACAGCATCAGGGAATCTGTTTCCAGTTCAACTCGCGCCAT |
||||||||||
| CDS seq | ATGGCGCGAGTTGAACTGGAAACAGATTCCCTGATGCTGTGCAATGCACTCCAGAGCAACTCTTTCAACTTATCAGTGATGGGTGGAGTAATCCTTGAGATCAAGCATGACGCTTCCTCCTGGACAGGCTGCCCGCCTGGGATGGAACGACTGGTGACCAGCGATTTAGCTGGATCAGTTATATAA |
||||||||||
| Protein seq | MARVELETDSLMLCNALQSNSFNLSVMGGVILEIKHDASSWTGCPPGMERLVTSDLAGSVI |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0166500 | OsMH63_03T0166500.1 | Chr03 | 10055650 | 10055935 | - | maker | ||
| CDS seq | ATGGCGCGAGTTGAACTGGAAACAGATTCCCTGATGCTGTGCAATGCACTCCAGAGCAACTCTTTCAACTTATCAGTGATGGGTGGAGTAATCCTTGAGATCAAGCATGACGCTTCCTCCTGGACAGGCTGCCCGCCTGGGATGGAACGACTGGTGACCAGCGATTTAGCTGGATCAGTTATATAA |
|||||||
| Protein seq | MARVELETDSLMLCNALQSNSFNLSVMGGVILEIKHDASSWTGCPPGMERLVTSDLAGSVI |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0216985 | 0.9802955 | 0.186419 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0013440 | SBH | 2.819834 | 3.255751 | 4.721148 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0013250 | SBH | 1.066552 | 1.957656 | 4.173148 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0013290 | SBH | 7.111722 | 2.779880 | 9.086436 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0013250 | SBH | 1.131461 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0013100 | SBH | 22.026304 | 0.326295 | 16.457010 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0198200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0013010 | SBH | 2.750720 | 0.253506 | 1.770288 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0167600 | RBH | 0.095709 | 0.8593825 | 0.0303205 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0013210 | SBH | 0.051957 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0013130 | SBH | 5.621010 | 0.0 | 3.948831 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0013090 | SBH | 2.648356 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007510 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007310 | SBH | 0.0 | 0.0 | 0.0 |
