Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0046100 | OGI:03007610 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:2915611-2922986 | ||||||||
| Gene Symbol | PSD128, OsCDC48, CDC48, OsCDC48-1, CDC48-1, OsRab5A1, OsRab5b, Rab5b | ||||||||||
| DNA seq | GTCAACTTATGTCTGCCCTCTGACCTTTGTTTTTTTTTTGTCGGTTGGTGTCTCGCCGACCAAATGAAGCCTCGGATTAACACTATAAAAACAAACTTCAACAAGTTCCAGCCTTGCAGGAGCATCTATAAACCTCACAAACATACAACGCAAATCTATCCATGCTCCAATCGATGAATACAACCCGCAACCATGCTCATCCACGACACATCCATACAGAAACATGCAATTCGGTTCAGTACCTCTCAGAATATTAACTTAAAAATAGTACACTGTTTCCCCGTATGTTACATATGATAAAGTTTACCAAAGCGAAATAGACATACTGAACAAAAGCACGGAGGTTAAATATAAATAGCACAGCGATCTAACTATATAAATCATCATCGTCAGCTGCGGCGGCAGCGGATGCGAAGGGGTCAGCGGCGGCGCCGGCGCCAGACGCTGGCTGGTCAGCGAACCTAAACTCGGTGCCGAACCCACGAGACTGCTGCAGAGTCTGGGCGAAGGCCTGGTACTTGCGGATGTCGGCGTCACTCACACTCCGGCGTGCGTACTTCATCGACTCCTCGAAGTGAGCCGCCTTGATCTCAGCAATATCATCAACCTCGTCCTCCTCCATGGCTTCAGGGTTGTCCTTCCTCCGCTTCTCCATCTCGATGTCCTGAAATCAAAATCAAGTCTCCGTTAGCACGCAAGCATAAGCCAGAAGTATGTTTGGAATTAATAACTAAATAATATTGAAGATATTTATGTTACCTTTTCAATGTTCTCTCTGATGGCGTATTTGCATGCACGCTGGCAGATTTCTGTAATATCAGCACCACTGAAACCTTGGGTGTATTTGGCAAGAGCATTCAGGTCTACATCCTTGGCCACAGGTGACTTCCGGAGGCAAGCTTTGAAGATCTGCAGCCTAGATTGATCATCAGGCAGAGGAATGTAGATAAGCTGATCAAGACGCCCTGGCCTTAGCAAGGCAGGGTCAATGATATCTGGCCTGTTAGTAGCACCAATAATGAAAACGGTTTTCTTCGCGTTCATGCCGTCCATCTCAGTCAACAACTGGTTCAGCACTCTATCAGCAGCACCTCCGGCATCACCAACACTGCTTCCTCTCTGAAATATGGTTGAAAGTAATCAGCCATAAAGATTATCATGAAAAAACCATGGAAATCGTTTGTTCAGAAGAGATAACTAACCTGGGTAGCAATTGAGTCAAGCTCATCAAAGAAGAGGACACAAGGAGCTGACTGCCTAGCCTTGTCAAAAATCTCACGCACATTGGCCTCACTCTCACCAAACCACATGGTAAGCAGCTCAGGTCCCTTGACACTAATGAAGTTAGCCTGGCACTCGTTAGCAATTGCCTTGGCCAACAAAGTCTTACCACAGCCAGGAGGGCCATAGAACAGAACACCTTTGGACGGAGACATGCCAAACTTCTCAAATTTCTCAGGATGCTCCACTGGATATTGGACAGTCTGCAAGGTTTTAAAGTATGTTAACCACAAATAAGAACTCATAAGTGAGGAAAGAAAAGAGCAATAAGTACCTCCTGCAGCTCCCGTTTGACATTCTCCAGTCCACCAATATCCTCCCAAGAGACATTTGGAACTTCAACAACCTGAATTTAAAAGGAAAGCTAGATGTAAGCCTCGGAAACAAATGGGAATAGATCCTGGTAATGTGCAAATAGATCATACTAAAAATACTCACAGTTTCACGGAGAGCAGACGGGTTGCTTGTCCCTAGTGCAGTCTTGAAGTGATCATTTGTAACAGCCATCGAGTTAAGTATCTCAGCATCTATGGTCTCATCCTCAAGATCTATAATATCCATCTTCTCACGGATGCATTGGAGAGCAGCCTCAGTGCAAAGAGCAGCAAGATCAGCACCCACATACCCATGAGTGTCTTTGGCAATGTGTTCCAGGTCAACCTGCGACAACAATGTAATAACTATTAAAAAAAATGCAACCAATAAAGAATATTTTGCATCTAGACTGTAGTGGTGATAACTCACATCTTCAGCCAGCTTCATGTTTTTGGTGTGAATCCGAAGAACTTCAAGCCGCCCAACTTCATCAGGAACACCAATGTCAATCTCCCGATCGAACCTACCAAACCTTCTGAGAGCAGGATCAATACTGTTTGGCCGGTTTGTAGCACCCATGACAATGACATGGGAACGAGCTTTGAGCCCATCCATAAGAGTCAACAGCTGTGAAACGATGCGCCTCTCAACTTCTCCATGGGTCTTCTCTCTCTTTGGTGCTATGGAGTCTATCTCATCGATGAAAATGATTGATGGTGCATTCTTCTCAGCTTCTTCAAATGCCTTCCTGAGATTACTCTCACTTTCTCCTGCTAGCTTTGACATAATCTCCGGGCCATTAATCAGAAAGAAGAAAGCACCTGTTTCATTAGCAACAGCTCTAGCAATGAGGGTCTTTCCAGAGCCAGGGGGTCCATAAAGCAGTATGCCCTTTGGAGGCTTCACACCAATAGACTTGAAAAGTTGGGGATGGCGCAATGGGAGCTCAACAAGTTCTCTGATTTGGGCCATCTGCTTCCTAACTCCACCAACATCATCGTAACCAACTTCATCAAGTCTTTCCTCATCCTCCCTCTTAATAGGCTCACCATCACAGAATATCTCCGTATCAGGTGCAACAATGCAGTACTCTGCAGGGTCAGTCTCTATAACTTTGAATTCAACACTTCTCATCCCACCCCTAACAAGGAAAAGGTCTCCTTTCCTCAAAGGACGGTATGCTTCAAGGAAGTACGCTGAAAAGTTACAAATAAAAACAGTATCAGCAGGATGTAAGAAGGCGACACTAGAGGTTGCAATAAACATATCAAGGTTGAATATTTGCCATAATATTAGCAACAATGTAGTTAATGTTATAATGTACATCGTAATATAGGTACTACAGTTCATGGAAATTAGGAGCCACAAAATCTTTCCTCGACATAATTAAGTATCAAACAAGCAAGTTCAAATGAAATGGCTAATACTGTTTTAGAACATGGCAGCAAAGCTCTAAAATTCTCTATCTAGAACCTTCTATAAGAGAAAAATCAAAATACTTCAGTGATAAAGAAATCTTACGTTTCAGGAAGGCATCAAACAAGTTTCCGGTGATGCCCTCAACAGTATCATCAATTGGAAGTATGTGCACACGCTTGCCGTATTTGACATCTGGGCATTGATGAACAGACACGACATCACCAAGTCGTACTCTCAGGTTCTTCCTGACAACCTTGTTCATTCTGATCTTCGGCTCCTCGCAGGTGTCATCAGCAAGAACAATGCAGATGGTGTCTTTTCTCTTCTTACCCTGTGATGCAGTGAGCCAAAATGTCAGCAGCAAATAATAAAATATGCCTTGATGACACAAGAATTATCATACAATGCAAAACAGAATCCCAAGTTCCCGACCTCATGGCATTATAAAACTAAATAAGTACTGTTGTGAAGCTACCTAGTGAATAGCCATCACAGTTTAGAAGTTAACTGCAATAATCTTGACATAATTACAGATTGTAAGCTGTACCCAATCAAATTAGAGGATCACTTATCACAGCATAATTACTGTAACAACCTAGTACTAAGGAAGCTAAAGAGTCATGAGTCATGAATACATATAATCTAACCATATGTAATCTGAATAAATAATCTACACCAAGGCTAACATCAGGAGCAAAAACTAGAAAGTAGCAAACATTCAACCTCACTAATAATTTATCCTCTACAAAACAGTAGACACACAAACCTAAGCTTAGAGACAAGAAAGCTAAGTTCTTTTTTCATACATATTCACAATTCAAACCATCAGTTCCTACTATCCAGGACAAGCACCACAGATTAGGCCTTCAAACCCTCGCAATTGAAGCTTAACAGAAGAATTACAGAGGCAAGGATCCCCAAACCTTGAGCAGCACAGTGTCGCCGCGGAAAAGCTGGAGCTTCTCCATGGTGTCGGGGTGCATCCCGATGACGGAGTTATCATCGTTGGTGGCCTCGTCGACCACCAGCCGGTTCGGCGACTTCTTCCTCTCGAGGATCGCCGTCGAGAAATCCTTCTTCCCCTTCCTGCTCACAACACCACCACCACCCCACGAACATTAAAATCACCCAAAAAAATCGCAAAAAAATCGCAAAAATTCGATAATCTACCAGATCGAAAAGGCTAGATCAGGAAGGGGGGAAACTTACGGATCGGAGGAGGAGGAGGGCTCTCCCTGGCTCGCCATGGGAGTCGGCGGATTCGCGGATTCGGGGGGGCCTCGAGCGCAGAGGCGCTAGGTTTTGGGTTGTTGGGTGTCTCTTCTCTTCTCTTGGCGGAGATATTCCGGGGGGAGAAGTGATTGTGGGGGAAGACGAGGGGATTAGTCTACCTTAAATAGCTCCTTTCTTGCCGAAGGGGTTTGGGATTCGACCTCCTACCGTCCTACGGGTTGGGCTCGGTTCGGGAGTCCCCGGAGGTCCATGACATGTGGGTCCCACGAGGCCTGTGGCCCACGCGACATAGAGTTCGGATGAGGTGGGTCCCGGAAGATGGAGGGGGCCCCGTGCCGAGTTGAGAGAGTGTGGGCCCGACATGTCAGTGTATCAGGTAGTTGTTGTTCACTTGTTCCTGCTCGTGCAGGAATAGGAGCATGTGTTCGGCTCGGAAGAGAAGTTTCGCATCTTTTGCTGCCTTCGATTGTAAGGAAAGTGTCCCGTGTTCGTATGCGATCGTGGCATTAATTCATTATACTGCACAAATTGTAGAGCGTAAAAGGCAAAAGTTTCTGTCTGTTTGAGGTTAGCCATCTGCAATTGTACACGGAGTACTTGTTTAGATGAAACTTTGGTGTGGTGGGTGTACACAGGCACAGCAACTAAGCAACTTTTTTTAGTACCGATATTAGATTGTTTTAGTAAACTAAGATGTTACACGACGGCACTATTAACATATACAATACGATACGATTGAACACAATGGGATAAACTGTACAGTATCCTTTGTTTTCCAAACAATCGACCATACAGCAGTTTTTGCCCTGACAGACATGTTACATGCACATTACCAGCTTGTATGTGTTCCACTTCAACAAACACCGAAGCTAATTATCAAGACGCCGTTGGCCTGGGCAACCTCTTCGCAATTTCCTGTACAAGGAACATGATCAAGTTATGAGGACGACGTTCACAAAGTTTCTTTTCCCAGCTATGTAGTGTAGCAAAAGATTTAAACATAAGAGGATAAAAACATCAATAGGAAAAGAACATGAAGGTGACAGTGCATGTGGACAATGTCCAGGAACCTGACTGATGAAAATGCAACGAAGTGTTTATCCGTAGGGCGTAGGCTGTGTAGAGTTGAACTTTGTTGTTAAAATGCCCACATTAGGCTGTCCCTATCTGTGGTGATCCTTAGGCGAGATCAGAGAAAATCACTGATTCTTGTGCTGAGATTGTTTATCCACACATATATGTGCTAGTGACTTAGTGAGAGTTTAATATGAGGTTAGAGCTGTTCTTCCATACCCCAAACCTCTTCTAACTAACTCAGGAATCTTTCTGTTTTTAATTAATAATGCAAAAACGGTGACCTGTTAATGGAAAAATATCATACCATAACGAGTTAGTATGATGATGACCATTGATGGCCTAACGCAGTAGCTGTCCATTCAATGCTTACACGTAAGGGGGTGGGTGAAACAGTTAGGATTTCCATGAATTTGAAGCTTTGGTGTTTTTGTTCAGCTTGATTAATTTGAAATAAAATAGCATGTTCTCTTGTTAGCTATCCTGCTTCAAGGACATCGTGAAAGCAAATAGCTTCATATGCTAGGGGGCATACCTCAAATACTTGGTTTATATTATCAGCTGTCTTTGCTGATGTCTCGATGAAAACCATATTATTCTTCTCTGCATACTCTTGTGCTTCCTTCAGAATGTGCACCATATCGTCAAAACAATTTTGCAGCATATTGTGATACTATGTTTACTACAACTTCACACAAGATCTGACCTGAGAAGATACATGTCGATTTTCATGTAGATCAGCTTTATTACCAACCAAAACCATGATAATATCAGGACTACCATGTTTTTGAAGTTCCTGCAATATAAGAAAAAACAATCTGAAAGTGCTTCATACCTGAAAAAAGAAGTGGAAACATAACATACTTCACAATAGTCGACATGGTACAATCTCACTGAATCAATTGATATTGATGAAATAAATCTAGAAGGTGCATTTTAAGATTAAATGCAAGTGTTCATATTATATACACTTCTCACGCTAGTCAGGGTAATCTTTGAGCATAAGCTTCAACACATTTATAATATTTTAGCAGCAATCTTACAGTATGATATAAAATTTTACTAGAACAGTTTCGGGCAAAAAATACAAACTCATAGTAAAAGATAGAAAGAGTAATCAATCAACCAGACATCAGAAAAGCAGATAATTTGGCAATAGCATACCTTCACCCAGTATTGTGCTTTGCTAAATGATTCTGGACTAGTTATGTCGTAGACAACAACTGCAGCAGCAGCTCCTCTGTAGTAAAGAGGTGCCAAGGCAGCATACCTAAAATTGGCTGGTACCAATGAGTTCTTGATTGAGAAAAACCATATGCATGTGTGGCACGTAAGATGGATCAATTGTAAAAATCAGTAACACATACTACTAGAACTTTCTCACAAAACCAATGCTTCTAATGCACCAACAGCATGCCATTATCCCAAGATTGGAAGAAGCTAAAACCATAGTGCTGTATGTGTACCTCTCTTGTCCAGCGGTATCCCATATTTCAAATTTCACTATTGTTGAGTCCTCCAAAGCCAATGTTTGTGATAAAAATGATGCACCGACAGTTACCTGAAATTATTTGAGGAAATAAGTTTAAAAAAATCGAACTTCTGAAAGTAAGAATCATGCATCTAAGGTGAAGAATAACATTATCAACTGAAACTAAGAGACTCAAAACAGTAATCACCTTGGAAGTGGGATCAAACTGACCACGAACAAAGCGAAGAACAATGCAACTTTTCCCTACACCAGAGTCACCAAGCAATACCAACTACAACATCAAAAGGATGGACACGTTAAAGAAAGCTGCTAGTAACATGATATAGAGGCATTATTGTAGTAATAAAGGGCAAAATGTGCAGTAAACCTTAGCACGCAAGTCCTTTGAATCAGTAGCGGAGTTATCGTTGCTAATATTGTTCAACCCTCCAGTGCTTCGAGCTGGATGACAAAACAGTGCTATGTGTTAACAAATGGCGGAAAATGGCTAATTCTTCTACTCCAGCTACAAACTTTCCCCAGCCCCCACTCACATACATCCACACACGATCCTCCCATTCAT
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| CDS seq | ATGAATGGGAGGATCGTGTGTGGATCTCGAAGCACTGGAGGGTTGAACAATATTAGCAACGATAACTCCGCTACTGATTCAAAGGACTTGCGTGCTAAGTTGGTATTGCTTGGTGACTCTGGTGTAGGGAAAAGTTGCATTGTTCTTCGCTTTGTTCGTGGTCAGTTTGATCCCACTTCCAAGGTAACTGTCGGTGCATCATTTTTATCACAAACATTGGCTTTGGAGGACTCAACAATAGTGAAATTTGAAATATGGGATACCGCTGGACAAGAGAGGTATGCTGCCTTGGCACCTCTTTACTACAGAGGAGCTGCTGCTGCAGTTGTTGTCTACGACATAACTAGTCCAGAATCATTTAGCAAAGCACAATACTGGGTGAAGGAACTTCAAAAACATGGTAGTCCTGATATTATCATGGTTTTGGTTGGTAATAAAGCTGATCTACATGAAAATCGACATGTATCTTCTCAGGAAGCACAAGAGTATGCAGAGAAGAATAATATGGTTTTCATCGAGACATCAGCAAAGACAGCTGATAATATAAACCAAGTATTTGAGGTCACCGTTTTTGCATTATTAATTAAAAACAGAAAGATTCCTGAGTTAGTTAGAAGAGGTTTGGGGAAGGGGAAGAAGGATTTCTCGACGGCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAACGATGATAACTCCGTCATCGGGATGCACCCCGACACCATGGAGAAGCTCCAGCTTTTCCGCGGCGACACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACCATCTGCATTGTTCTTGCTGATGACACCTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGTACGACTTGGTGATGTCGTGTCTGTTCATCAATGCCCAGATGTCAAATACGGCAAGCGTGTGCACATACTTCCAATTGATGATACTGTTGAGGGCATCACCGGAAACTTGTTTGATGCCTTCCTGAAACCGTACTTCCTTGAAGCATACCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGTTAGGGGTGGGATGAGAAGTGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTGCATTGTTGCACCTGATACGGAGATATTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGAGGAAAGACTTGATGAAGTTGGTTACGATGATGTTGGTGGAGTTAGGAAGCAGATGGCCCAAATCAGAGAACTTGTTGAGCTCCCATTGCGCCATCCCCAACTTTTCAAGTCTATTGGTGTGAAGCCTCCAAAGGGCATACTGCTTTATGGACCCCCTGGCTCTGGAAAGACCCTCATTGCTAGAGCTGTTGCTAATGAAACAGGTGCTTTCTTCTTTCTGATTAATGGCCCGGAGATTATGTCAAAGCTAGCAGGAGAAAGTGAGAGTAATCTCAGGAAGGCATTTGAAGAAGCTGAGAAGAATGCACCATCAATCATTTTCATCGATGAGATAGACTCCATAGCACCAAAGAGAGAGAAGACCCATGGAGAAGTTGAGAGGCGCATCGTTTCACAGCTGTTGACTCTTATGGATGGGCTCAAAGCTCGTTCCCATGTCATTGTCATGGGTGCTACAAACCGGCCAAACAGTATTGATCCTGCTCTCAGAAGGTTTGGTAGGTTCGATCGGGAGATTGACATTGGTGTTCCTGATGAAGTTGGGCGGCTTGAAGTTCTTCGGATTCACACCAAAAACATGAAGCTGGCTGAAGATGTTGACCTGGAACACATTGCCAAAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTGCACTGAGGCTGCTCTCCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATACTTAACTCGATGGCTGTTACAAATGATCACTTCAAGACTGCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCTTGGGAGGATATTGGTGGACTGGAGAATGTCAAACGGGAGCTGCAGGAGACTGTCCAATATCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCTGTTCTATGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCAAGGCAATTGCTAACGAGTGCCAGGCTAACTTCATTAGTGTCAAGGGACCTGAGCTGCTTACCATGTGGTTTGGTGAGAGTGAGGCCAATGTGCGTGAGATTTTTGACAAGGCTAGGCAGTCAGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGACTCAATTGCTACCCAGAGAGGAAGCAGTGTTGGTGATGCCGGAGGTGCTGCTGATAGAGTGCTGAACCAGTTGTTGACTGAGATGGACGGCATGAACGCGAAGAAAACCGTTTTCATTATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTAAGGCCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTGCCTGATGATCAATCTAGGCTGCAGATCTTCAAAGCTTGCCTCCGGAAGTCACCTGTGGCCAAGGATGTAGACCTGAATGCTCTTGCCAAATACACCCAAGGTTTCAGTGGTGCTGATATTACAGAAATCTGCCAGCGTGCATGCAAATACGCCATCAGAGAGAACATTGAAAAGGACATCGAGATGGAGAAGCGGAGGAAGGACAACCCTGAAGCCATGGAGGAGGACGAGGTTGATGATATTGCTGAGATCAAGGCGGCTCACTTCGAGGAGTCGATGAAGTACGCACGCCGGAGTGTGAGTGACGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACTCTGCAGCAGTCTCGTGGGTTCGGCACCGAGTTTAGGTTCGCTGACCAGCCAGCGTCTGGCGCCGGCGCCGCCGCTGACCCCTTCGCATCCGCTGCCGCCGCAGCTGACGATGATGATTTATATAGTTAG
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| Protein seq | MNGRIVCGSRSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGNKADLHENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEVTVFALLIKNRKIPELVRRGLGKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRKDNPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADQPASGAGAAADPFASAAAAADDDDLYS |
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| Function | Cell division cycle protein 48 homolog [UniProtKB/Swiss-Prot:P54774] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0046100 | OsMH63_03T0046100.1 | Chr03 | 2915611 | 2922986 | - | maker | ||
| CDS seq | ATGAATGGGAGGATCGTGTGTGGATCTCGAAGCACTGGAGGGTTGAACAATATTAGCAACGATAACTCCGCTACTGATTCAAAGGACTTGCGTGCTAAGTTGGTATTGCTTGGTGACTCTGGTGTAGGGAAAAGTTGCATTGTTCTTCGCTTTGTTCGTGGTCAGTTTGATCCCACTTCCAAGGTAACTGTCGGTGCATCATTTTTATCACAAACATTGGCTTTGGAGGACTCAACAATAGTGAAATTTGAAATATGGGATACCGCTGGACAAGAGAGGTATGCTGCCTTGGCACCTCTTTACTACAGAGGAGCTGCTGCTGCAGTTGTTGTCTACGACATAACTAGTCCAGAATCATTTAGCAAAGCACAATACTGGGTGAAGGAACTTCAAAAACATGGTAGTCCTGATATTATCATGGTTTTGGTTGGTAATAAAGCTGATCTACATGAAAATCGACATGTATCTTCTCAGGAAGCACAAGAGTATGCAGAGAAGAATAATATGGTTTTCATCGAGACATCAGCAAAGACAGCTGATAATATAAACCAAGTATTTGAGGTCACCGTTTTTGCATTATTAATTAAAAACAGAAAGATTCCTGAGTTAGTTAGAAGAGGTTTGGGGAAGGGGAAGAAGGATTTCTCGACGGCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAACGATGATAACTCCGTCATCGGGATGCACCCCGACACCATGGAGAAGCTCCAGCTTTTCCGCGGCGACACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACCATCTGCATTGTTCTTGCTGATGACACCTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGTACGACTTGGTGATGTCGTGTCTGTTCATCAATGCCCAGATGTCAAATACGGCAAGCGTGTGCACATACTTCCAATTGATGATACTGTTGAGGGCATCACCGGAAACTTGTTTGATGCCTTCCTGAAACCGTACTTCCTTGAAGCATACCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGTTAGGGGTGGGATGAGAAGTGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTGCATTGTTGCACCTGATACGGAGATATTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGAGGAAAGACTTGATGAAGTTGGTTACGATGATGTTGGTGGAGTTAGGAAGCAGATGGCCCAAATCAGAGAACTTGTTGAGCTCCCATTGCGCCATCCCCAACTTTTCAAGTCTATTGGTGTGAAGCCTCCAAAGGGCATACTGCTTTATGGACCCCCTGGCTCTGGAAAGACCCTCATTGCTAGAGCTGTTGCTAATGAAACAGGTGCTTTCTTCTTTCTGATTAATGGCCCGGAGATTATGTCAAAGCTAGCAGGAGAAAGTGAGAGTAATCTCAGGAAGGCATTTGAAGAAGCTGAGAAGAATGCACCATCAATCATTTTCATCGATGAGATAGACTCCATAGCACCAAAGAGAGAGAAGACCCATGGAGAAGTTGAGAGGCGCATCGTTTCACAGCTGTTGACTCTTATGGATGGGCTCAAAGCTCGTTCCCATGTCATTGTCATGGGTGCTACAAACCGGCCAAACAGTATTGATCCTGCTCTCAGAAGGTTTGGTAGGTTCGATCGGGAGATTGACATTGGTGTTCCTGATGAAGTTGGGCGGCTTGAAGTTCTTCGGATTCACACCAAAAACATGAAGCTGGCTGAAGATGTTGACCTGGAACACATTGCCAAAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTGCACTGAGGCTGCTCTCCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATACTTAACTCGATGGCTGTTACAAATGATCACTTCAAGACTGCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCTTGGGAGGATATTGGTGGACTGGAGAATGTCAAACGGGAGCTGCAGGAGACTGTCCAATATCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCTGTTCTATGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCAAGGCAATTGCTAACGAGTGCCAGGCTAACTTCATTAGTGTCAAGGGACCTGAGCTGCTTACCATGTGGTTTGGTGAGAGTGAGGCCAATGTGCGTGAGATTTTTGACAAGGCTAGGCAGTCAGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGACTCAATTGCTACCCAGAGAGGAAGCAGTGTTGGTGATGCCGGAGGTGCTGCTGATAGAGTGCTGAACCAGTTGTTGACTGAGATGGACGGCATGAACGCGAAGAAAACCGTTTTCATTATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTAAGGCCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTGCCTGATGATCAATCTAGGCTGCAGATCTTCAAAGCTTGCCTCCGGAAGTCACCTGTGGCCAAGGATGTAGACCTGAATGCTCTTGCCAAATACACCCAAGGTTTCAGTGGTGCTGATATTACAGAAATCTGCCAGCGTGCATGCAAATACGCCATCAGAGAGAACATTGAAAAGGACATCGAGATGGAGAAGCGGAGGAAGGACAACCCTGAAGCCATGGAGGAGGACGAGGTTGATGATATTGCTGAGATCAAGGCGGCTCACTTCGAGGAGTCGATGAAGTACGCACGCCGGAGTGTGAGTGACGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACTCTGCAGCAGTCTCGTGGGTTCGGCACCGAGTTTAGGTTCGCTGACCAGCCAGCGTCTGGCGCCGGCGCCGCCGCTGACCCCTTCGCATCCGCTGCCGCCGCAGCTGACGATGATGATTTATATAGTTAG
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| Protein seq | MNGRIVCGSRSTGGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGNKADLHENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEVTVFALLIKNRKIPELVRRGLGKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRKDNPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADQPASGAGAAADPFASAAAAADDDDLYS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 59.2694185 | 65.5318945 | 58.99107 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0151800 | RBH | 25.863911 | 32.608162 | 37.265442 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g05730 | RBH | 17.170244 | 17.006838 | 9.319200 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0151800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0003990 | RBH | 5.681180 | 97.434052 | 44.720718 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0003910 | RBH | 2.888127 | 18.732880 | 19.791336 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003950 | RBH | 10.626536 | 88.243095 | 77.057678 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0003900 | RBH | 2.127590 | 2.773606 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0004000 | RBH | 71.205170 | 101.788551 | 139.899765 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0265300 | RBH | 67.178272 | 106.9792325 | 108.5330085 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0003890 | RBH | 3.452940 | 6.056162 | 10.204918 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0046400 | RBH | 60.599018 | 55.8271715 | 64.3359625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0004000 | RBH | 2.711171 | 1.155524 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0003970 | RBH | 6.692461 | 69.546730 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0003940 | RBH | 38.913795 | 54.775158 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0004000 | RBH | 7.317274 | 7.679372 | 13.313393 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0003980 | RBH | 3.160825 | 51.384876 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G003950 | RBH | 4.768200 | 16.719791 | 24.071169 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0003810 | RBH | 12.481707 | 104.816048 | 66.399345 |
