Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0545800 | OGI:02094140 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:34768511-34770242 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGGGTATTTCAGTAGGAATTTGACGCTTCGACTAACTAATTTGGCGCGTAAAGTGCGATTTTTTTCCCACGGATGGGGATTTACCGCCAAATATACAGAGAAGGGATGAGCCATGGAGCATGGGATGCAAAAGGCCAAGAAAGCATGTTATTTGTCGACGGCATCGGCTCCTGCATCGTCTCCACGCCTACTCCATCCATCTTGTTGCTCGTGCCGAGCTGTCGATTAAACAAGCGCCCGCTTTCTTCTCTCTCTTCCTTTCTCCGTCCTCCAGCTCAGATTGTGATGACCTGGACGGGCTAATAGTAGGTTGATTAGTCCTCATTGTACTTGCCCAAACACTTAATCGAATCGGCTATACTGTTACTCAAGATTTCGCGCGCCCCTATAAAAAAGTCGATATAAAAGAGAAAAAAAACTTGCGAAAGTTTACTAGCAATTTCAAAGAAGGGGTGCTAGATGAATCTCTCTTCCATTTGTATGACCATTCTCTACATTTTTCATGCAAGAAGTGCAAGCATGTATGCAGCCATGCTTGCAAAAACTAAACTATAAAAAACTAGCTAATTACGCTTTTAAGCGATTTGGTATAATAATTGGTTGTAGCTTGTTGAATAAAGTCTGGAAATATATTCCATTATCTAAAAAAACTAGCTAATTAAATTAATCACCGTGAAAAAGCAGCTAAAGATCTTAGATCCTAGGTGTGAGATCTACATGGTACATCTTGGAAGGCTTGAGCCCATCGGTGGCGTTGAAGAAGCGGAGCGTGCGCGCCCACTTGAGGCGGTCCTTGAGCTTGTGCACGGCCACCGTGTCGGCGATGAGCTCGTGGCGGAAGCAGTTGACGTCGGCGCCGTACATCTCCCTGTCCAGGTAGTCGTACATCCGCGGCTCCTCGCCGAACCTGTTCTTCCCCTTGCCTGCCCCGCGCAACCACCGGCCGAACACGTCGTCCTCGTACCCGATCTCCCGGCCCCGCAGCTCCGGCGACGCCGCGATCCACTCCGCCACGTCCCACGACACGATGTACCCCATCCCGGACATGTACTGCCACGCCGGGTCGATGTGGCACGGGTTCAGGAACCCGTGGTACATGTCGCGGCGCGGCTTGCGGCGCAGCGTGTCGGCGAGCGCGCCCAGGCGGTAGTACGTGTCGTCGTCGATCTTGCCGGCGAAGTCGTAGCGCGGCTCGGCGCCGGCGGGGAACAGGCGCGGGAGGGCCGAGAAGTAGTCGTACGTCTTGCCGTCGTTCATGTTCTCGGTGCAGTTGAGCACGAGGATGTCGCCGTGGGTGATGATCTCCAGCGCCACCAGCACGGCGTCCTCCTCCTTGTCCAGGCTGCACATCACGAAGCGGACGTCGATGGCGGCGCGCCGCGGCGGCGGCTGGAGCGCGTACGCCATGCGGAGCAGCGCGCGCCGCTCGTAGAAGTCGGGGCGGGTGAGGATGCCGAAGAACATGCGGAAGTCGACGTCGTCGTCCGCCGCCGCCGCCGCCGCGACGCTCTTGCTGGCGGCGTCGCATGGGGCAAGCGCCGACTTGAGCTGGCTCAAGTCGTTGGGGAAGATGACCAGGTAGAAGAGCGCGAGGACGGCGACGGGGACGAGGCAGGCAGAGAAGTTCGCCGCCATTGTTGCTAGCTTAATTAGTGAGGTGCACTTTGCGCTAGCTTAACGCTAAGTACGTTGCTTCGTGCTTTTGTCAGTCCTTAAGTAGACTGCCGATGCT
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| CDS seq | ATGGCGGCGAACTTCTCTGCCTGCCTCGTCCCCGTCGCCGTCCTCGCGCTCTTCTACCTGGTCATCTTCCCCAACGACTTGAGCCAGCTCAAGTCGGCGCTTGCCCCATGCGACGCCGCCAGCAAGAGCGTCGCGGCGGCGGCGGCGGCGGACGACGACGTCGACTTCCGCATGTTCTTCGGCATCCTCACCCGCCCCGACTTCTACGAGCGGCGCGCGCTGCTCCGCATGGCGTACGCGCTCCAGCCGCCGCCGCGGCGCGCCGCCATCGACGTCCGCTTCGTGATGTGCAGCCTGGACAAGGAGGAGGACGCCGTGCTGGTGGCGCTGGAGATCATCACCCACGGCGACATCCTCGTGCTCAACTGCACCGAGAACATGAACGACGGCAAGACGTACGACTACTTCTCGGCCCTCCCGCGCCTGTTCCCCGCCGGCGCCGAGCCGCGCTACGACTTCGCCGGCAAGATCGACGACGACACGTACTACCGCCTGGGCGCGCTCGCCGACACGCTGCGCCGCAAGCCGCGCCGCGACATGTACCACGGGTTCCTGAACCCGTGCCACATCGACCCGGCGTGGCAGTACATGTCCGGGATGGGGTACATCGTGTCGTGGGACGTGGCGGAGTGGATCGCGGCGTCGCCGGAGCTGCGGGGCCGGGAGATCGGGTACGAGGACGACGTGTTCGGCCGGTGGTTGCGCGGGGCAGGCAAGGGGAAGAACAGGTTCGGCGAGGAGCCGCGGATGTACGACTACCTGGACAGGGAGATGTACGGCGCCGACGTCAACTGCTTCCGCCACGAGCTCATCGCCGACACGGTGGCCGTGCACAAGCTCAAGGACCGCCTCAAGTGGGCGCGCACGCTCCGCTTCTTCAACGCCACCGATGGGCTCAAGCCTTCCAAGATGTACCATGTAGATCTCACACCTAGGATCTAA
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| Protein seq | MAANFSACLVPVAVLALFYLVIFPNDLSQLKSALAPCDAASKSVAAAAAADDDVDFRMFFGILTRPDFYERRALLRMAYALQPPPRRAAIDVRFVMCSLDKEEDAVLVALEIITHGDILVLNCTENMNDGKTYDYFSALPRLFPAGAEPRYDFAGKIDDDTYYRLGALADTLRRKPRRDMYHGFLNPCHIDPAWQYMSGMGYIVSWDVAEWIAASPELRGREIGYEDDVFGRWLRGAGKGKNRFGEEPRMYDYLDREMYGADVNCFRHELIADTVAVHKLKDRLKWARTLRFFNATDGLKPSKMYHVDLTPRI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0545800 | OsMH63_02T0545800.1 | Chr02 | 34768511 | 34770242 | - | maker | ||
| CDS seq | ATGGCGGCGAACTTCTCTGCCTGCCTCGTCCCCGTCGCCGTCCTCGCGCTCTTCTACCTGGTCATCTTCCCCAACGACTTGAGCCAGCTCAAGTCGGCGCTTGCCCCATGCGACGCCGCCAGCAAGAGCGTCGCGGCGGCGGCGGCGGCGGACGACGACGTCGACTTCCGCATGTTCTTCGGCATCCTCACCCGCCCCGACTTCTACGAGCGGCGCGCGCTGCTCCGCATGGCGTACGCGCTCCAGCCGCCGCCGCGGCGCGCCGCCATCGACGTCCGCTTCGTGATGTGCAGCCTGGACAAGGAGGAGGACGCCGTGCTGGTGGCGCTGGAGATCATCACCCACGGCGACATCCTCGTGCTCAACTGCACCGAGAACATGAACGACGGCAAGACGTACGACTACTTCTCGGCCCTCCCGCGCCTGTTCCCCGCCGGCGCCGAGCCGCGCTACGACTTCGCCGGCAAGATCGACGACGACACGTACTACCGCCTGGGCGCGCTCGCCGACACGCTGCGCCGCAAGCCGCGCCGCGACATGTACCACGGGTTCCTGAACCCGTGCCACATCGACCCGGCGTGGCAGTACATGTCCGGGATGGGGTACATCGTGTCGTGGGACGTGGCGGAGTGGATCGCGGCGTCGCCGGAGCTGCGGGGCCGGGAGATCGGGTACGAGGACGACGTGTTCGGCCGGTGGTTGCGCGGGGCAGGCAAGGGGAAGAACAGGTTCGGCGAGGAGCCGCGGATGTACGACTACCTGGACAGGGAGATGTACGGCGCCGACGTCAACTGCTTCCGCCACGAGCTCATCGCCGACACGGTGGCCGTGCACAAGCTCAAGGACCGCCTCAAGTGGGCGCGCACGCTCCGCTTCTTCAACGCCACCGATGGGCTCAAGCCTTCCAAGATGTACCATGTAGATCTCACACCTAGGATCTAA
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| Protein seq | MAANFSACLVPVAVLALFYLVIFPNDLSQLKSALAPCDAASKSVAAAAAADDDVDFRMFFGILTRPDFYERRALLRMAYALQPPPRRAAIDVRFVMCSLDKEEDAVLVALEIITHGDILVLNCTENMNDGKTYDYFSALPRLFPAGAEPRYDFAGKIDDDTYYRLGALADTLRRKPRRDMYHGFLNPCHIDPAWQYMSGMGYIVSWDVAEWIAASPELRGREIGYEDDVFGRWLRGAGKGKNRFGEEPRMYDYLDREMYGADVNCFRHELIADTVAVHKLKDRLKWARTLRFFNATDGLKPSKMYHVDLTPRI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 1.1680285 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0785700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g54450 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0785700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036240 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036330 | SBH | 0.000000 | 0.000000 | 0.135277 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036180 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035770 | RBH | 0.0 | 0.140881 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0035960 | RBH | 0.0 | 8.394888 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0078500 | SBH | 0 | 0.264256 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035780 | SBH | 0.0 | 0.248486 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0575800 | SBH | 0.024581 | 0.01456 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0036040 | RBH | 0.0 | 0.098627 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0035860 | RBH | 0.0 | 2.769232 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0036100 | RBH | 0.0 | 1.381064 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0036060 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035660 | SBH | 0.0 | 0.741018 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036310 | SBH | 0.0 | 1.419886 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0036050 | SBH | 0.0 | 0.864619 | 0.0 |
