Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0301000 | OGI:02052540 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:19365124-19367251 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGACCACCGGGTCTGATGCTATCGACCAACATAATCAGCACAACCATATGGACAATGGAGGTGATGAATTCTTACTGTCGTTATGTAAGTTTTATTTGTATGATGAATGCTTTTCTTACTTGCTGCCCTTTTTTAGATGGCTTCACCCAGCATGATGACAACACCCTTGTGGCTGATGTAGTTGATGGCATTACTCAACACGGTGACCACAACCAGATTACCAACGAAGGTGAGTTTGTTCATCTATTTTCCATATTTCATATTGTCTCAGTTGATCAATATTTGTATGCAAAGCTTTCAATTCATGATCATCTTGGATCAATGTTTGCTTCACCTCAATAATTTTAGTTTTAATTTCAACTGCAATGTACATTTACAACTAGGGGGAGTGGAGAGAAGGGACCGGGGAAATAATATGGGACGTGGTCTCCAAAGGTTAAACCGAGCGTGCCGTGGCAAGCTGCAAGTTGTCATAACTGAAGGGAATATAAGGCCAGTGGTTCCTCTTGTTGCTGCAAAATTTGCAACTGAATGCAACATCATAGTTAGGAACCATGTGCCTATACTCCCGCATTGGAAGCTATACAAGGAAAAACCTGCATCTGCGTACGTTAATCTGTTCTTAGGAAAACTAAAGGTACATGCATTCTCTGGTCCTTTCCACATTTAGTCTCAATAGAAGATCCATTGTTTGTTATTTTAAGCCATAAATTACTGAATTGATATTCTTTTCTATAAATGTTCTTCCATTCGATTAGGCCAAGTTTGACATAAACATAGAGGATGATACAGTTAAAATGGCTTGTACTGAGATGATGAAGTCCGCAGTTCGCCAACAAAGATACAGGCTGAAGCAAAAATATTTTGATCCTTTTCCACTACATTTGGTTACAAAAACTTCTCCTATCAAATTCATGAGTAATGAACAGTGGACTCAACTCCTAGAATCATGGAAGAGTCCCCAAAAGATGGTATGTTCTCTCTGCAAAACCAGATTGATGCCTTGTGCATGCTAATCTATCACCAACTAGGTCATGTATTGTTGTCTTTAATGTAGGAGATGTGTCAAAAGAACAAAGAAAACCGAGGGAATGTTAAGTACCATCACACAACCGGATCTCGTGCCTACATGGTTCATGTTGAAAATTTGGTAAGTGGGCCATTTTAAGCACCATATAATTTTTTGTATGAACAAGCTACTGCTTAAATACGTCTGCCTCAGCCTAAACAAGATGATGTCCATGCTCATGTTGTTATGTTCATGAGAGTCCATTAGTTTGTGGAATGTTCAAGGACACTATATCTGATCCGATGCCAATACATTGTGTGAAAGGTGACGAGTTAGGTTTCCATCTATGTCTAAGTTGAGTGTGTTAATAGATTAAAAGTTATTGTTTTTATGTCTGTGTATGCAGTGAAAGACCTCTGTTGCAGTTGTTTGTCTAAGTGGAAAACATAGTGTGACTGTGTGCAACAAATGAGGCTAGAAATTAGTTGAACATGTTCTTTTAGATTCTCAATTGAACAGTAGCTGCCCAGATTTTCGTAACATCTTAATTCATGCTGGACCTAATGCATATATGTTGTTCTCAGGATGACAAATACAATGATGAAGAACCTAATGCATTTGATTTGTTCAAGGAGTTCCACTACAGCAAGAAAAAAAAATGCTACACCCCTGTTGTACAGGAGGCTATTGTAAGATAATTTTCAGACTTTGATCTTTGTAGTGCTTATTTTTAATTCTCTCAACATCAACCATGTTTGCTACTTTCTTGCTAGACTCGGATGGAAAACAAGCTATCTACAAGAACAGAAGGTGAAGAACTTAAGTCAGCGGCTCAAGTTGTTGCTGATGTGCTTGCTGAGAACACCAAGAAGAATCGGTTCTTGAAGAATGTGGGGTTCCATAATGCCCAGCCTAGATTCAGTGAGCAAAGCACTGAGACAGAACTAGAAGCGGAGAAAAGGACCAATGCTGAGCTTCGTGCACAGGTGGCTGATTTGTCAAACAAAGTGCAAGAATCTGAGCAGGCAAGGATTAAAGACCGAGAGGAGATGAAGAGGAGTCAATCTGAGATGGAAGCAAAACTTAATCTTTTGCTCAGTCAAATTCGACCAAGTTAA
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| CDS seq | ATGACCACCGGGTCTGATGCTATCGACCAACATAATCAGCACAACCATATGGACAATGGAGGTGATGAATTCTTACTGTCGTTATATGGCTTCACCCAGCATGATGACAACACCCTTGTGGCTGATGTAGTTGATGGCATTACTCAACACGGTGACCACAACCAGATTACCAACGAAGGGGGAGTGGAGAGAAGGGACCGGGGAAATAATATGGGACGTGGTCTCCAAAGGTTAAACCGAGCGTGCCGTGGCAAGCTGCAAGTTGTCATAACTGAAGGGAATATAAGGCCAGTGGTTCCTCTTGTTGCTGCAAAATTTGCAACTGAATGCAACATCATAGTTAGGAACCATGTGCCTATACTCCCGCATTGGAAGCTATACAAGGAAAAACCTGCATCTGCGTACGTTAATCTGTTCTTAGGAAAACTAAAGGCCAAGTTTGACATAAACATAGAGGATGATACAGTTAAAATGGCTTGTACTGAGATGATGAAGTCCGCAGTTCGCCAACAAAGATACAGGCTGAAGCAAAAATATTTTGATCCTTTTCCACTACATTTGGTTACAAAAACTTCTCCTATCAAATTCATGAGTAATGAACAGTGGACTCAACTCCTAGAATCATGGAAGAGTCCCCAAAAGATGGAGATGTGTCAAAAGAACAAAGAAAACCGAGGGAATGTTAAGTACCATCACACAACCGGATCTCGTGCCTACATGGTTCATGTTGAAAATTTGGATGACAAATACAATGATGAAGAACCTAATGCATTTGATTTGTTCAAGGAGTTCCACTACAGCAAGAAAAAAAAATGCTACACCCCTGTTGTACAGGAGGCTATTACTCGGATGGAAAACAAGCTATCTACAAGAACAGAAGGTGAAGAACTTAAGTCAGCGGCTCAAGTTGTTGCTGATGTGCTTGCTGAGAACACCAAGAAGAATCGGTTCTTGAAGAATGTGGGGTTCCATAATGCCCAGCCTAGATTCAGTGAGCAAAGCACTGAGACAGAACTAGAAGCGGAGAAAAGGACCAATGCTGAGCTTCGTGCACAGGTGGCTGATTTGTCAAACAAAGTGCAAGAATCTGAGCAGGCAAGGATTAAAGACCGAGAGGAGATGAAGAGGAGTCAATCTGAGATGGAAGCAAAACTTAATCTTTTGCTCAGTCAAATTCGACCAAGTTAA
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| Protein seq | MTTGSDAIDQHNQHNHMDNGGDEFLLSLYGFTQHDDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACRGKLQVVITEGNIRPVVPLVAAKFATECNIIVRNHVPILPHWKLYKEKPASAYVNLFLGKLKAKFDINIEDDTVKMACTEMMKSAVRQQRYRLKQKYFDPFPLHLVTKTSPIKFMSNEQWTQLLESWKSPQKMEMCQKNKENRGNVKYHHTTGSRAYMVHVENLDDKYNDEEPNAFDLFKEFHYSKKKKCYTPVVQEAITRMENKLSTRTEGEELKSAAQVVADVLAENTKKNRFLKNVGFHNAQPRFSEQSTETELEAEKRTNAELRAQVADLSNKVQESEQARIKDREEMKRSQSEMEAKLNLLLSQIRPS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0301000 | OsMH63_02T0301000.1 | Chr02 | 19365124 | 19367251 | + | maker | ||
| CDS seq | ATGACCACCGGGTCTGATGCTATCGACCAACATAATCAGCACAACCATATGGACAATGGAGGTGATGAATTCTTACTGTCGTTATATGGCTTCACCCAGCATGATGACAACACCCTTGTGGCTGATGTAGTTGATGGCATTACTCAACACGGTGACCACAACCAGATTACCAACGAAGGGGGAGTGGAGAGAAGGGACCGGGGAAATAATATGGGACGTGGTCTCCAAAGGTTAAACCGAGCGTGCCGTGGCAAGCTGCAAGTTGTCATAACTGAAGGGAATATAAGGCCAGTGGTTCCTCTTGTTGCTGCAAAATTTGCAACTGAATGCAACATCATAGTTAGGAACCATGTGCCTATACTCCCGCATTGGAAGCTATACAAGGAAAAACCTGCATCTGCGTACGTTAATCTGTTCTTAGGAAAACTAAAGGCCAAGTTTGACATAAACATAGAGGATGATACAGTTAAAATGGCTTGTACTGAGATGATGAAGTCCGCAGTTCGCCAACAAAGATACAGGCTGAAGCAAAAATATTTTGATCCTTTTCCACTACATTTGGTTACAAAAACTTCTCCTATCAAATTCATGAGTAATGAACAGTGGACTCAACTCCTAGAATCATGGAAGAGTCCCCAAAAGATGGAGATGTGTCAAAAGAACAAAGAAAACCGAGGGAATGTTAAGTACCATCACACAACCGGATCTCGTGCCTACATGGTTCATGTTGAAAATTTGGATGACAAATACAATGATGAAGAACCTAATGCATTTGATTTGTTCAAGGAGTTCCACTACAGCAAGAAAAAAAAATGCTACACCCCTGTTGTACAGGAGGCTATTACTCGGATGGAAAACAAGCTATCTACAAGAACAGAAGGTGAAGAACTTAAGTCAGCGGCTCAAGTTGTTGCTGATGTGCTTGCTGAGAACACCAAGAAGAATCGGTTCTTGAAGAATGTGGGGTTCCATAATGCCCAGCCTAGATTCAGTGAGCAAAGCACTGAGACAGAACTAGAAGCGGAGAAAAGGACCAATGCTGAGCTTCGTGCACAGGTGGCTGATTTGTCAAACAAAGTGCAAGAATCTGAGCAGGCAAGGATTAAAGACCGAGAGGAGATGAAGAGGAGTCAATCTGAGATGGAAGCAAAACTTAATCTTTTGCTCAGTCAAATTCGACCAAGTTAA
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| Protein seq | MTTGSDAIDQHNQHNHMDNGGDEFLLSLYGFTQHDDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACRGKLQVVITEGNIRPVVPLVAAKFATECNIIVRNHVPILPHWKLYKEKPASAYVNLFLGKLKAKFDINIEDDTVKMACTEMMKSAVRQQRYRLKQKYFDPFPLHLVTKTSPIKFMSNEQWTQLLESWKSPQKMEMCQKNKENRGNVKYHHTTGSRAYMVHVENLDDKYNDEEPNAFDLFKEFHYSKKKKCYTPVVQEAITRMENKLSTRTEGEELKSAAQVVADVLAENTKKNRFLKNVGFHNAQPRFSEQSTETELEAEKRTNAELRAQVADLSNKVQESEQARIKDREEMKRSQSEMEAKLNLLLSQIRPS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0519100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g31790 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0519100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0018400 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0018550 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0015320 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0029440 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029120 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0478900 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028840 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0140300 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0029100 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029040 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029300 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029470 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029270 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G009220 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0015460 | SBH | 0.0 | 0.0 | 0.0 |
