Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0127800 | OGI:02022420 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:7935977-7937325 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGGCCCCCCGCCGCCGTTCTCCGGCTGCGAGGTTGATTGCACGTTGCTTCGTGCAAGTCAGGGCGATCTTGACATCGCCACTAATGGTGATGGGGCCGCCGGGGCTCAGCATCTTCATCTGGAGGTAGGCATAATGGGTGAACGCCATGAACTTCACCAATGCGGGCCTGCCAAGCACCGCGTTGTAGGGCAGATTGAGATCCACCACATTAAAGTCGAGCCGTTCGGTGCGGAAGTTGGTGGGATCACCAAAGGTGACCAGGAGCACAATATGACCGGACGGCCACGTGTGTCCCGGGGTCACTCCTATGATGGGTAGCGACGTCTTAAGCTTCAACCCTGGGGCCTTGATGGCGTCGAAGGCCGCGGGGGAGATGATGTTTAGTGCGACCCCGCCGTTGATTAGGACGCGCTTCATCTTAACGTTGCAGATGGTTTGCGATACCACCAGCGCCAACTGCCCTCCCCGGGCAACCACTGGCGGGTAGTCGGTTTGGTCGAAGGTGAGCTTCACCTTCGACCAGCGTGCTCGCCGTGTCGCCTCATGGGTAGGGACAGCGGCCAGAAGCTCGCGCTTCATGGCCTTAAAGCTACGGTCGGATGAGTGGGCGCATGCTCCACAGTCGACGGTGGCGACAGTGGTGTCAAGCTCCTAGAACTCCAGGTCCTCATCACCATCGTCGACGGGGGCCTTCTTCTTCGCCTTCTCTCGCCGCTTGTCGGCCGAGGTCTCCGGGGCTTTGCCCTCCCGGTGACCCTGCCGCTTCTCCTGATGCGACTTCTTGACGCACTCGGCCAAGGACTTGATCGTGCGACAGTCAGCAAGGCTGTGGGTGGAGGTATTGTGGACGATGCACCACTTATCTAGCGAGCGGCTCTCACCAGGGGCGGCGGTGTCCTTCTGTTTGGTGCTCGCGGCCTTTTCTTTGTGTGGGGGCCGCAAGGTGCCTTCGGCGGTGAGGACGTGGCCTTTGTCGCCGGATCGGACCGATCTCTTCTTCTTCCTCTTCTCTCGCCGCTTGGAGCGGGAGGAGGACTCAGGGGCAGCCGCAGCCGCCGCGCCAGAGCTGGAGGAGTTCCAAGCCCACGCCTCCTCTTTGCGGGCCACGTGATCTGCGAGCTGAAAAAGCTCCGCGTATGTTTTGTGCTCCTTGGAGGCGACCTTCTCCAGCACGCGGTTATGCCGCACGCCCCCCTAAATGCGTAGATGACCGCGTGAGGAGGGATGCATGGGATCGATGGTGTTGCGGACCTGACAAAACCACTAGATGTATGAGTGGAGGGACTCATCGTCCTTCCGTTGTACCGCACGCTGTTAACGACAAAATTTGGTAAGCCCAAAGTCAT
More
|
||||||||||
| CDS seq | ATGACTTTGGGCTTACCAAATTTTGTCGTTAACAGCGTGCGGTACAACGGAAGGACGATGAGTCCCTCCACTCATACATCTAGTGGTTTTGGGGGCGTGCGGCATAACCGCGTGCTGGAGAAGGTCGCCTCCAAGGAGCACAAAACATACGCGGAGCTTTTTCAGCTCGCAGATCACGTGGCCCGCAAAGAGGAGGCGTGGGCTTGGAACTCCTCCAGCTCTGGCGCGGCGGCTGCGGCTGCCCCTGAGTCCTCCTCCCGCTCCAAGCGGCGAGAGAAGAGGAAGAAGAAGAGATCGGTCCGATCCGGCGACAAAGGCCACGTCCTCACCGCCGAAGGCACCTTGCGGCCCCCACACAAAGAAAAGGCCGCGAGCACCAAACAGAAGGACACCGCCGCCCCTGGTGAGAGCCGCTCGCTAGATAAGTGGTGCATCGTCCACAATACCTCCACCCACAGCCTTGCTGACTGTCGCACGATCAAGTCCTTGGCCGAGTGCGTCAAGAAGTCGCATCAGGAGAAGCGGCAGGGTCACCGGGAGGGCAAAGCCCCGGAGACCTCGGCCGACAAGCGGCGAGAGAAGGCGAAGAAGAAGGCCCCCGTCGACGATGCATGCGCCCACTCATCCGACCGTAGCTTTAAGGCCATGAAGCGCGAGCTTCTGGCCGCTGTCCCTACCCATGAGGCGACACGGCGAGCACGCTGGTCGAAGGTGAAGCTCACCTTCGACCAAACCGACTACCCGCCAGTGGTTGCCCGGGGAGGGCAGTTGGCGCTGGTGGTATCGCAAACCATCTGCAACGTTAAGATGAAGCGCGTCCTAATCAACGGCGGGGTCGCACTAAACATCATCTCCCCCGCGGCCTTCGACGCCATCAAGGCCCCAGGGTTGAAGCTTAAGACGTCGCTACCCATCATAGGAGTGACCCCGGGACACACGTGGCCGTCCGGTCATATTGTGCTCCTGGTCACCTTTGGTGATCCCACCAACTTCCGCACCGAACGGCTCGACTTTAATGTGGTGGATCTCAATCTGCCCTACAACGCGGTGCTTGGCAGGCCCGCATTGGTGAAGTTCATGGCGTTCACCCATTATGCCTACCTCCAGATGAAGATGCTGAGCCCCGGCGGCCCCATCACCATTAGTGGCGATGTCAAGATCGCCCTGACTTGCACGAAGCAACGTGCAATCAACCTCGCAGCCGGAGAACGGCGGCGGGGGGCCTGA
More
|
||||||||||
| Protein seq | MTLGLPNFVVNSVRYNGRTMSPSTHTSSGFGGVRHNRVLEKVASKEHKTYAELFQLADHVARKEEAWAWNSSSSGAAAAAAPESSSRSKRREKRKKKRSVRSGDKGHVLTAEGTLRPPHKEKAASTKQKDTAAPGESRSLDKWCIVHNTSTHSLADCRTIKSLAECVKKSHQEKRQGHREGKAPETSADKRREKAKKKAPVDDACAHSSDRSFKAMKRELLAAVPTHEATRRARWSKVKLTFDQTDYPPVVARGGQLALVVSQTICNVKMKRVLINGGVALNIISPAAFDAIKAPGLKLKTSLPIIGVTPGHTWPSGHIVLLVTFGDPTNFRTERLDFNVVDLNLPYNAVLGRPALVKFMAFTHYAYLQMKMLSPGGPITISGDVKIALTCTKQRAINLAAGERRRGA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0127800 | OsMH63_02T0127800.1 | Chr02 | 7935977 | 7937325 | - | maker | ||
| CDS seq | ATGACTTTGGGCTTACCAAATTTTGTCGTTAACAGCGTGCGGTACAACGGAAGGACGATGAGTCCCTCCACTCATACATCTAGTGGTTTTGGGGGCGTGCGGCATAACCGCGTGCTGGAGAAGGTCGCCTCCAAGGAGCACAAAACATACGCGGAGCTTTTTCAGCTCGCAGATCACGTGGCCCGCAAAGAGGAGGCGTGGGCTTGGAACTCCTCCAGCTCTGGCGCGGCGGCTGCGGCTGCCCCTGAGTCCTCCTCCCGCTCCAAGCGGCGAGAGAAGAGGAAGAAGAAGAGATCGGTCCGATCCGGCGACAAAGGCCACGTCCTCACCGCCGAAGGCACCTTGCGGCCCCCACACAAAGAAAAGGCCGCGAGCACCAAACAGAAGGACACCGCCGCCCCTGGTGAGAGCCGCTCGCTAGATAAGTGGTGCATCGTCCACAATACCTCCACCCACAGCCTTGCTGACTGTCGCACGATCAAGTCCTTGGCCGAGTGCGTCAAGAAGTCGCATCAGGAGAAGCGGCAGGGTCACCGGGAGGGCAAAGCCCCGGAGACCTCGGCCGACAAGCGGCGAGAGAAGGCGAAGAAGAAGGCCCCCGTCGACGATGCATGCGCCCACTCATCCGACCGTAGCTTTAAGGCCATGAAGCGCGAGCTTCTGGCCGCTGTCCCTACCCATGAGGCGACACGGCGAGCACGCTGGTCGAAGGTGAAGCTCACCTTCGACCAAACCGACTACCCGCCAGTGGTTGCCCGGGGAGGGCAGTTGGCGCTGGTGGTATCGCAAACCATCTGCAACGTTAAGATGAAGCGCGTCCTAATCAACGGCGGGGTCGCACTAAACATCATCTCCCCCGCGGCCTTCGACGCCATCAAGGCCCCAGGGTTGAAGCTTAAGACGTCGCTACCCATCATAGGAGTGACCCCGGGACACACGTGGCCGTCCGGTCATATTGTGCTCCTGGTCACCTTTGGTGATCCCACCAACTTCCGCACCGAACGGCTCGACTTTAATGTGGTGGATCTCAATCTGCCCTACAACGCGGTGCTTGGCAGGCCCGCATTGGTGAAGTTCATGGCGTTCACCCATTATGCCTACCTCCAGATGAAGATGCTGAGCCCCGGCGGCCCCATCACCATTAGTGGCGATGTCAAGATCGCCCTGACTTGCACGAAGCAACGTGCAATCAACCTCGCAGCCGGAGAACGGCGGCGGGGGGCCTGA
More
|
|||||||
| Protein seq | MTLGLPNFVVNSVRYNGRTMSPSTHTSSGFGGVRHNRVLEKVASKEHKTYAELFQLADHVARKEEAWAWNSSSSGAAAAAAPESSSRSKRREKRKKKRSVRSGDKGHVLTAEGTLRPPHKEKAASTKQKDTAAPGESRSLDKWCIVHNTSTHSLADCRTIKSLAECVKKSHQEKRQGHREGKAPETSADKRREKAKKKAPVDDACAHSSDRSFKAMKRELLAAVPTHEATRRARWSKVKLTFDQTDYPPVVARGGQLALVVSQTICNVKMKRVLINGGVALNIISPAAFDAIKAPGLKLKTSLPIIGVTPGHTWPSGHIVLLVTFGDPTNFRTERLDFNVVDLNLPYNAVLGRPALVKFMAFTHYAYLQMKMLSPGGPITISGDVKIALTCTKQRAINLAAGERRRGA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0896545 | 0.5660605 | 0.046721 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g14100 | RBH | 0.000000 | 0.184332 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0131600 | RBH | 0.089913 | 0.3795815 | 0.321283 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
