Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_01G0686900 OGI:01123050 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr01:43702980-43706401
Gene Symbol -
DNA seq

AATTTTTTAAGCTTAATTATGTCATGATCTGACAATGTGGTGCTACAGTAAACATTTGCTAATGACTGATTAATTAGGCTTAATAAATTCATCTCGCAGTTTACATACGGATTATGTAATTTGTTTTGTTATTAATCTACGTTTAATACTTCAAATGTGTGTCCATATATCTGATATGACGTAGCAATTTTTTTTTTTTTTGCCGGTGGAACTTTACACAGCCCAAACCTATATTGAAGGGAGCCAAATTGTACTTTTTTCCAACCGCAATATCCGTTCCGCTGCGGTGCGTTGCCACTGCATGGGTCGGGCAGCAGATGGGGAGGTGAGAGTGGGCCATCACATCCATGTGTTGGCCCATTTCATAGTGGGCCGTACAAACTGGCGCTCGCGTCTGATCGGGCCCATCTGATCACCGCATCCATGGCGAGTGGCGACGACGAGCCGACGACTTGTCAACGAGTCAACGGCGACCTGCCTCCACTGGAGTCAAGCTCCGCCTCCGCCTCCGACTCCGGGCAGAGCAGAGCAGCAGCTGCCGCCGCCGACGACGAGAGAAGAGGCGGCCAGATGGCGGGCCTGCGGCGGCTGTGGGGGGAGTGGGAGATCCGGGTGCTTCTGCTGAGCAGCCTCTCGCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTCCGCAAGCGCAACGTCGCCGCCTGGCTCCATTTCATGCTCTGGCTCGCCTACCTCCTCGCCGACTCCATCGCCATCTACGCCCTCGGCAACCTCTCCCAGAACCAGAAGCTCTGCAGCAACGGCCCCCACGGCGGCGGCGACATGCACCTCCTCGTCTTCTGGGCGCCCTTCCTCATCCTCCACCTCGGCGGGCAGGACACCATCACCGCGTTCGCCATCGAGGACAACGAGCTCTGGCTCCGCCACCTCCTCAGCCTCGTCTCCCAGATCGCCCTCGCCCTCTACGTCTACTGGAAGTCGCGCCCCTCCGCCGCGGGCCTCCTCGTCCCGGCCATCCTCATGTTCGTCTCCGGCGTCGTCAAGTACGGCGAGCGGACATGGGCGCTCAAGTCGGCGAGCATGAGCAGCCTCCGGAGCTCCATGCTGACGCGCCCCGACCCTGGCCCGAACTACGCCAAGTTCATGGAGGAGTACCACTCCAGCAAGGAGGCCGGCCTGCACGCCGAGATCGTCATCGTCCCGGAGCGCCCCCCCGACGACAACATCCATGTCCAGGAGGAGCACATGGAGTACGGCGAGCTCGTCGTCAAGGCGCACCGGTTCTTCCACACCTTCCGCCGCCTCTTCGTCGACCTCATCCTCAGCTTCCAGGACCGAACCGACAGCCTCGCCTTCTTCCGCCGCCTCCAGCGAGATCAGGCGTATAAGGTGGTCGAGATCGAGCTCCTGCTCATGTACGAGTCGCTCCACTCCAAATCCTCCGTCATCCATGGCCCGACCGGCCGCTACCTCCGCATCTTCACCCTCGCCGCGCCCGTCCTCTCCCTCATCGTCTTCTCCGGCACCGACAAGGCTCCCTACAAGCCGGTTGACGTCGCCGTCTCCTACGTGCTCCTCGGCGGCGCCATCTTCTTGGAGATCTACGCCATCCTCCTCATGGCCATCTCGCCATGGAGCTTCGCCGACCTGCGGAAGAAGGACAAGTGCCTCCCCGTGGCGAGCGGGGTGTTCCGGGCGGTGAGCTACTTCTTGCCGGAGGCGAGGCCGCGGTGGTCGAACCAGATGGCGCAGTACAACCTCATCCACTACTGCCTCAAGGACAAGCCGACATGGCTCACCGGAGCGCTCGAGAAGCTCGAGTGGGACTACAATGTCCGCGTGAAGACGATCTGGGACAGTATCTGGTACACCCACCACATCGGCGTCTCCATGGTGCTCAAGCAGCTCGTCTTCAAGCAGCTCAAGGAGAAGGCCAACAGCACGGCGGACCCGATGAGCTACCGGCGGTTCGGCGACCACCGCGGCCAGTGGTTCCTCCACCGGATGGGGTGCTACCAGGAGCTCGGGGCCAGCGTCGAGGTGGAGTTCGACGAGAGCATCATCCTCTGGCACATCGCCACCGACCTCTGCTTCTACGACGACGACGACGACGACGGCCGCGACGCCGGCGAGAGGAAGCTGAAGCGGTGGTCATCTTGCTGCTTCTGCTCCTGCTCCGACCACGCCCCCACGGCGGACGACAGCCACCTGAACGACGTGTCGCACCTGCCGGCGGCGAGCAGGGAGATCTCCAACTACATGCTGTTCCTGCTGGTGATGCGGCCGTTCATGCTGACGGCGAGCATCGGGCAGATCCGGTTCGGGGACACGTGCGCGGAGACCAAGAACTTCTTCCTCCGGGGGGACGAGCTCGGGGCAGCGAGGAAGGCGGCGGAGGCGCTGACGAAGGTGAAGACGGAGATCAACCCGCGGGAGGTGAAGGGGGACCGGAGCAAGTCGGTGCTGTTCGACGCGTGCAGGCTGGCGGAGCAGCTGCGGCGGCTGGAGCGGCGGAAGCGGTGGCGGCTGGTGGCCGGCGTGTGGGTGGAGATGCTGTGCTACGCCGCCGGCAAGTGCAGGGGCAACTTCCACGCCAAGCAGCTCAGCCAGGGCGGCGAGCTGCTCACCGTCGTGTGGCTGCTCATGGCGCACTTCGGCATGGGTGACCAGTACAGAGTCGAGGCCGGCCACGCCCGCGCCAAGCTCATCATCGAGAACTAGCCCCAAATTGCAGCCGGCACATAACAGCTGAGAGTTTCAGAATTCAGATCAGTTCAGAGTTACAAATAAATTCTCTTTTGTTGCTGAAGTTAAAGATTGAGCTTGTGACTTGATTTCTTAGGCCTTTTACCAAGCCCCTCGAAGAGTTTCTCTAGCGGCTGGGCAACTCAGAAATTGGCCCAAGCAACCTCATCCCATAGTGCAGTGATCTACTTTGCGTCTCCACGCGCGGCGCGAGGTTACGGGGCGTCGGAGGCATGCCCTCCACAGCGCACGGAATCAGGGTGATTGGCGCCGTGCGTTACCCAGACCGAGCGAAGTTCTCCGCGTCCTGCATGGGAGCGAGTCGCCATCTTTGATTGCGACCGCGCGCGACACATTAGCAGATTTCGGACGTGGCAAAGGAAGTAACACGCCACGTCCTTGCACTGTGACCGGCCTTAGATTAATCACTGATTCTTGCGGGGATAAATCCATGTCAATCTGTAAAGTTACACACATACTTAATTCCTACTATTTTTTAGTGATCAAGCCCCTTCCTATAGTATACAACTCTCAGGCTGAAAGCCATTTTATAGTGAATTTCTTTGTAAGTGATTAGGCAAATCAAATGCCCTCATTCAAATGTTGCCTAACCAAAATTTTGGTATTATTTGTTCCTTATGTTCATTAAAACAAACTAGCTGGATGGTCCGCGCAATTACATGACTAGC

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CDS seq

ATGGCGAGTGGCGACGACGAGCCGACGACTTGTCAACGAGTCAACGGCGACCTGCCTCCACTGGAGTCAAGCTCCGCCTCCGCCTCCGACTCCGGGCAGAGCAGAGCAGCAGCTGCCGCCGCCGACGACGAGAGAAGAGGCGGCCAGATGGCGGGCCTGCGGCGGCTGTGGGGGGAGTGGGAGATCCGGGTGCTTCTGCTGAGCAGCCTCTCGCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTCCGCAAGCGCAACGTCGCCGCCTGGCTCCATTTCATGCTCTGGCTCGCCTACCTCCTCGCCGACTCCATCGCCATCTACGCCCTCGGCAACCTCTCCCAGAACCAGAAGCTCTGCAGCAACGGCCCCCACGGCGGCGGCGACATGCACCTCCTCGTCTTCTGGGCGCCCTTCCTCATCCTCCACCTCGGCGGGCAGGACACCATCACCGCGTTCGCCATCGAGGACAACGAGCTCTGGCTCCGCCACCTCCTCAGCCTCGTCTCCCAGATCGCCCTCGCCCTCTACGTCTACTGGAAGTCGCGCCCCTCCGCCGCGGGCCTCCTCGTCCCGGCCATCCTCATGTTCGTCTCCGGCGTCGTCAAGTACGGCGAGCGGACATGGGCGCTCAAGTCGGCGAGCATGAGCAGCCTCCGGAGCTCCATGCTGACGCGCCCCGACCCTGGCCCGAACTACGCCAAGTTCATGGAGGAGTACCACTCCAGCAAGGAGGCCGGCCTGCACGCCGAGATCGTCATCGTCCCGGAGCGCCCCCCCGACGACAACATCCATGTCCAGGAGGAGCACATGGAGTACGGCGAGCTCGTCGTCAAGGCGCACCGGTTCTTCCACACCTTCCGCCGCCTCTTCGTCGACCTCATCCTCAGCTTCCAGGACCGAACCGACAGCCTCGCCTTCTTCCGCCGCCTCCAGCGAGATCAGGCGTATAAGGTGGTCGAGATCGAGCTCCTGCTCATGTACGAGTCGCTCCACTCCAAATCCTCCGTCATCCATGGCCCGACCGGCCGCTACCTCCGCATCTTCACCCTCGCCGCGCCCGTCCTCTCCCTCATCGTCTTCTCCGGCACCGACAAGGCTCCCTACAAGCCGGTTGACGTCGCCGTCTCCTACGTGCTCCTCGGCGGCGCCATCTTCTTGGAGATCTACGCCATCCTCCTCATGGCCATCTCGCCATGGAGCTTCGCCGACCTGCGGAAGAAGGACAAGTGCCTCCCCGTGGCGAGCGGGGTGTTCCGGGCGGTGAGCTACTTCTTGCCGGAGGCGAGGCCGCGGTGGTCGAACCAGATGGCGCAGTACAACCTCATCCACTACTGCCTCAAGGACAAGCCGACATGGCTCACCGGAGCGCTCGAGAAGCTCGAGTGGGACTACAATGTCCGCGTGAAGACGATCTGGGACAGTATCTGGTACACCCACCACATCGGCGTCTCCATGGTGCTCAAGCAGCTCGTCTTCAAGCAGCTCAAGGAGAAGGCCAACAGCACGGCGGACCCGATGAGCTACCGGCGGTTCGGCGACCACCGCGGCCAGTGGTTCCTCCACCGGATGGGGTGCTACCAGGAGCTCGGGGCCAGCGTCGAGGTGGAGTTCGACGAGAGCATCATCCTCTGGCACATCGCCACCGACCTCTGCTTCTACGACGACGACGACGACGACGGCCGCGACGCCGGCGAGAGGAAGCTGAAGCGGTGGTCATCTTGCTGCTTCTGCTCCTGCTCCGACCACGCCCCCACGGCGGACGACAGCCACCTGAACGACGTGTCGCACCTGCCGGCGGCGAGCAGGGAGATCTCCAACTACATGCTGTTCCTGCTGGTGATGCGGCCGTTCATGCTGACGGCGAGCATCGGGCAGATCCGGTTCGGGGACACGTGCGCGGAGACCAAGAACTTCTTCCTCCGGGGGGACGAGCTCGGGGCAGCGAGGAAGGCGGCGGAGGCGCTGACGAAGGTGAAGACGGAGATCAACCCGCGGGAGGTGAAGGGGGACCGGAGCAAGTCGGTGCTGTTCGACGCGTGCAGGCTGGCGGAGCAGCTGCGGCGGCTGGAGCGGCGGAAGCGGTGGCGGCTGGTGGCCGGCGTGTGGGTGGAGATGCTGTGCTACGCCGCCGGCAAGTGCAGGGGCAACTTCCACGCCAAGCAGCTCAGCCAGGGCGGCGAGCTGCTCACCGTCGTGTGGCTGCTCATGGCGCACTTCGGCATGGGTGACCAGTACAGAGTCGAGGCCGGCCACGCCCGCGCCAAGCTCATCATCGAGAACTAG

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Protein seq

MASGDDEPTTCQRVNGDLPPLESSSASASDSGQSRAAAAAADDERRGGQMAGLRRLWGEWEIRVLLLSSLSLQVFLLFTGGLRKRNVAAWLHFMLWLAYLLADSIAIYALGNLSQNQKLCSNGPHGGGDMHLLVFWAPFLILHLGGQDTITAFAIEDNELWLRHLLSLVSQIALALYVYWKSRPSAAGLLVPAILMFVSGVVKYGERTWALKSASMSSLRSSMLTRPDPGPNYAKFMEEYHSSKEAGLHAEIVIVPERPPDDNIHVQEEHMEYGELVVKAHRFFHTFRRLFVDLILSFQDRTDSLAFFRRLQRDQAYKVVEIELLLMYESLHSKSSVIHGPTGRYLRIFTLAAPVLSLIVFSGTDKAPYKPVDVAVSYVLLGGAIFLEIYAILLMAISPWSFADLRKKDKCLPVASGVFRAVSYFLPEARPRWSNQMAQYNLIHYCLKDKPTWLTGALEKLEWDYNVRVKTIWDSIWYTHHIGVSMVLKQLVFKQLKEKANSTADPMSYRRFGDHRGQWFLHRMGCYQELGASVEVEFDESIILWHIATDLCFYDDDDDDGRDAGERKLKRWSSCCFCSCSDHAPTADDSHLNDVSHLPAASREISNYMLFLLVMRPFMLTASIGQIRFGDTCAETKNFFLRGDELGAARKAAEALTKVKTEINPREVKGDRSKSVLFDACRLAEQLRRLERRKRWRLVAGVWVEMLCYAAGKCRGNFHAKQLSQGGELLTVVWLLMAHFGMGDQYRVEAGHARAKLIIEN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_01G0686900 OsMH63_01T0686900.1 Chr01 43702980 43706401 + maker
CDS seq

ATGGCGAGTGGCGACGACGAGCCGACGACTTGTCAACGAGTCAACGGCGACCTGCCTCCACTGGAGTCAAGCTCCGCCTCCGCCTCCGACTCCGGGCAGAGCAGAGCAGCAGCTGCCGCCGCCGACGACGAGAGAAGAGGCGGCCAGATGGCGGGCCTGCGGCGGCTGTGGGGGGAGTGGGAGATCCGGGTGCTTCTGCTGAGCAGCCTCTCGCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTCCGCAAGCGCAACGTCGCCGCCTGGCTCCATTTCATGCTCTGGCTCGCCTACCTCCTCGCCGACTCCATCGCCATCTACGCCCTCGGCAACCTCTCCCAGAACCAGAAGCTCTGCAGCAACGGCCCCCACGGCGGCGGCGACATGCACCTCCTCGTCTTCTGGGCGCCCTTCCTCATCCTCCACCTCGGCGGGCAGGACACCATCACCGCGTTCGCCATCGAGGACAACGAGCTCTGGCTCCGCCACCTCCTCAGCCTCGTCTCCCAGATCGCCCTCGCCCTCTACGTCTACTGGAAGTCGCGCCCCTCCGCCGCGGGCCTCCTCGTCCCGGCCATCCTCATGTTCGTCTCCGGCGTCGTCAAGTACGGCGAGCGGACATGGGCGCTCAAGTCGGCGAGCATGAGCAGCCTCCGGAGCTCCATGCTGACGCGCCCCGACCCTGGCCCGAACTACGCCAAGTTCATGGAGGAGTACCACTCCAGCAAGGAGGCCGGCCTGCACGCCGAGATCGTCATCGTCCCGGAGCGCCCCCCCGACGACAACATCCATGTCCAGGAGGAGCACATGGAGTACGGCGAGCTCGTCGTCAAGGCGCACCGGTTCTTCCACACCTTCCGCCGCCTCTTCGTCGACCTCATCCTCAGCTTCCAGGACCGAACCGACAGCCTCGCCTTCTTCCGCCGCCTCCAGCGAGATCAGGCGTATAAGGTGGTCGAGATCGAGCTCCTGCTCATGTACGAGTCGCTCCACTCCAAATCCTCCGTCATCCATGGCCCGACCGGCCGCTACCTCCGCATCTTCACCCTCGCCGCGCCCGTCCTCTCCCTCATCGTCTTCTCCGGCACCGACAAGGCTCCCTACAAGCCGGTTGACGTCGCCGTCTCCTACGTGCTCCTCGGCGGCGCCATCTTCTTGGAGATCTACGCCATCCTCCTCATGGCCATCTCGCCATGGAGCTTCGCCGACCTGCGGAAGAAGGACAAGTGCCTCCCCGTGGCGAGCGGGGTGTTCCGGGCGGTGAGCTACTTCTTGCCGGAGGCGAGGCCGCGGTGGTCGAACCAGATGGCGCAGTACAACCTCATCCACTACTGCCTCAAGGACAAGCCGACATGGCTCACCGGAGCGCTCGAGAAGCTCGAGTGGGACTACAATGTCCGCGTGAAGACGATCTGGGACAGTATCTGGTACACCCACCACATCGGCGTCTCCATGGTGCTCAAGCAGCTCGTCTTCAAGCAGCTCAAGGAGAAGGCCAACAGCACGGCGGACCCGATGAGCTACCGGCGGTTCGGCGACCACCGCGGCCAGTGGTTCCTCCACCGGATGGGGTGCTACCAGGAGCTCGGGGCCAGCGTCGAGGTGGAGTTCGACGAGAGCATCATCCTCTGGCACATCGCCACCGACCTCTGCTTCTACGACGACGACGACGACGACGGCCGCGACGCCGGCGAGAGGAAGCTGAAGCGGTGGTCATCTTGCTGCTTCTGCTCCTGCTCCGACCACGCCCCCACGGCGGACGACAGCCACCTGAACGACGTGTCGCACCTGCCGGCGGCGAGCAGGGAGATCTCCAACTACATGCTGTTCCTGCTGGTGATGCGGCCGTTCATGCTGACGGCGAGCATCGGGCAGATCCGGTTCGGGGACACGTGCGCGGAGACCAAGAACTTCTTCCTCCGGGGGGACGAGCTCGGGGCAGCGAGGAAGGCGGCGGAGGCGCTGACGAAGGTGAAGACGGAGATCAACCCGCGGGAGGTGAAGGGGGACCGGAGCAAGTCGGTGCTGTTCGACGCGTGCAGGCTGGCGGAGCAGCTGCGGCGGCTGGAGCGGCGGAAGCGGTGGCGGCTGGTGGCCGGCGTGTGGGTGGAGATGCTGTGCTACGCCGCCGGCAAGTGCAGGGGCAACTTCCACGCCAAGCAGCTCAGCCAGGGCGGCGAGCTGCTCACCGTCGTGTGGCTGCTCATGGCGCACTTCGGCATGGGTGACCAGTACAGAGTCGAGGCCGGCCACGCCCGCGCCAAGCTCATCATCGAGAACTAG

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Protein seq

MASGDDEPTTCQRVNGDLPPLESSSASASDSGQSRAAAAAADDERRGGQMAGLRRLWGEWEIRVLLLSSLSLQVFLLFTGGLRKRNVAAWLHFMLWLAYLLADSIAIYALGNLSQNQKLCSNGPHGGGDMHLLVFWAPFLILHLGGQDTITAFAIEDNELWLRHLLSLVSQIALALYVYWKSRPSAAGLLVPAILMFVSGVVKYGERTWALKSASMSSLRSSMLTRPDPGPNYAKFMEEYHSSKEAGLHAEIVIVPERPPDDNIHVQEEHMEYGELVVKAHRFFHTFRRLFVDLILSFQDRTDSLAFFRRLQRDQAYKVVEIELLLMYESLHSKSSVIHGPTGRYLRIFTLAAPVLSLIVFSGTDKAPYKPVDVAVSYVLLGGAIFLEIYAILLMAISPWSFADLRKKDKCLPVASGVFRAVSYFLPEARPRWSNQMAQYNLIHYCLKDKPTWLTGALEKLEWDYNVRVKTIWDSIWYTHHIGVSMVLKQLVFKQLKEKANSTADPMSYRRFGDHRGQWFLHRMGCYQELGASVEVEFDESIILWHIATDLCFYDDDDDDGRDAGERKLKRWSSCCFCSCSDHAPTADDSHLNDVSHLPAASREISNYMLFLLVMRPFMLTASIGQIRFGDTCAETKNFFLRGDELGAARKAAEALTKVKTEINPREVKGDRSKSVLFDACRLAEQLRRLERRKRWRLVAGVWVEMLCYAAGKCRGNFHAKQLSQGGELLTVVWLLMAHFGMGDQYRVEAGHARAKLIIEN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 3.0341225 9.324808 4.210509

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0953100 RBH 0.889104 1.773614 1.249363
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g72380 RBH 0.725135 1.148918 0.165839
Nipponbare | IRGSP 1.0 | RAP-db Os01g0953100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0047290 RBH 0.068140 2.814323 0.909911
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0046820 RBH 0.327559 2.443743 0.916468
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0047250 RBH 0.764952 5.199954 0.712921
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0046660 RBH 0.0 0.110780 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0046190 RBH 2.066780 2.440024 2.192651
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0381100 RBH 2.9579365 8.673548 0.0066855
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0045700 RBH 0.004870 0.159019 0.241945
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0689100 RBH 3.670942 4.137621 5.2927155
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0046290 RBH 0.168732 0.083368 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0046150 RBH 0.278240 1.755293 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0046440 RBH 0.975054 5.218370 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0046410 RBH 0.374044 0.103122 0.198885
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0046200 RBH 0.366750 1.500775 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G046460 RBH 0.200334 0.653750 0.391227
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0046280 RBH 1.921120 5.973296 1.719779
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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