Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0682900 | OGI:01121600 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:43425521-43428158 | ||||||||
| Gene Symbol | OsPR2 | ||||||||||
| DNA seq | AAGAGAAGAACGATTGGCTCTCTGATACGTGAAGTTAACATCATTGATCATCCGTCGCTATATAAATGAAGCTGCCCATTCATATTCCTATCGACGATCAGGAGCGAGCATTGAAGCATACGTATATCCATCTCCAGAAACTCGATCAAGCATACTAGCTGAGACAGATCGAGTCACCTAGCTATTTGAGCAAATGGGAGGTATATATTTTAGATTATTCATTATTTTCCTTCCTTTTTTCAAGCAGTTAATTCTCTATTTTCGTTGATTTGATCGATCGATCGATCGATCGTAATACGGTTGAGTGGTGCCGTGGTGATGATGCAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGTCGCGGAGCGAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCGTCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACCTCGCCAACAACCCCTCCGCCGCCGCCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCCCCGTCGCACGGCGTGTTCAGCTCTGACGTGCAGCAGTTCATGGTTCCCATCGCGCGGTTCCTGGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCATACAGGGAAAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAGCGGCCTCACCTACACCAACCTGTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCAAACGTCCGCGTCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGGGAGGGTTCGCCGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACGTATGCCATTATCGCATTTCGTATGATATATCGTCGTATATATATCCGCACGTACGTTGGTATGTAGCTAACGGGTGCGTGCACGCGTGTTGGTAATTTTTTGTAGCTTATCCTCGTCCGGCCGTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGACCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGTCCATGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGCGCAACTCCGGAATCGACCTCATCCTCGACGCCGGCGGCTTCGACACGGTGTCCTACCTCGCCGCCAGCGCCTCCAACGCGGCGTCCTGGGTCCATGACAACATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATAGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCGTAGCCCAGTACCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCAACTACGCCACCTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGGCGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGTTCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGACCGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAGGTCGCCGGTCTATCAGATTGCCTTTCCGAATTAGCAGCTGCTAATACGAGCATGGATCTGCAGGCAATCGAGTAATGCTTCAGTAATGTTGTGTTGGGTGTATTTTAATGTTCTCTGTGTGCTGCCACTTTACGCTTTGATAATGCATGCATGCGCATGAATAAAAACTTTTGAAGGTTTCTTAACGGTTGACAACAACGGTAGTGTGCAAGCTTGCAGTCCGCTGTGACGGTGAGTATTTGCAAACAATAGGGGGAAATTAAATTGGAAAACAGAGTAATAAATATTTTATGAGGAAACAACTCGCTTAAGAATTGCTATTGACAACTCTACGCACAAGAACACGA
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| CDS seq | ATGGGAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGTCGCGGAGCGAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCGTCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACCTCGCCAACAACCCCTCCGCCGCCGCCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCCCCGTCGCACGGCGTGTTCAGCTCTGACGTGCAGCAGTTCATGGTTCCCATCGCGCGGTTCCTGGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCATACAGGGAAAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAGCGGCCTCACCTACACCAACCTGTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCAAACGTCCGCGTCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGGGAGGGTTCGCCGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACCTTATCCTCGTCCGGCCGTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGACCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGTCCATGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGCGCAACTCCGGAATCGACCTCATCCTCGACGCCGGCGGCTTCGACACGGTGTCCTACCTCGCCGCCAGCGCCTCCAACGCGGCGTCCTGGGTCCATGACAACATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATAGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCGTAGCCCAGTACCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCAACTACGCCACCTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGGCGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGTTCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGACCGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAGGTCGCCGGTCTATCAGATTGCCTTTCCGAATTAG
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| Protein seq | MGAVNGVCYGVLGDNLPSRSEVVQLLKSQGIGAMRIYYPDKEALDALRGSGIAVIVDVGDSGAVANLANNPSAAADWVRDNVEAYWPSVIIRYITVGNELPAGDMGLILPAMQNVHKALVSAGLSSSIKVSTAIKMDVVANTFPPSHGVFSSDVQQFMVPIARFLANTVSPLLVNVYPYVSYRENPRDISLNYATFQPGTTVRDDGSGLTYTNLFNAMVDAVYAALEKAGTPNVRVAVSETGWPSAGGFAATAENAMNHNQGVIDNVKNGTPKRPGPLETYVFAMFNENQQTGDETRRHFGLFNPDKTPAYPITPYPRPAVQSIGVCYGMVGNDLPSRSEVVQMYVSMGINRMRIYNPDREALDALRNSGIDLILDAGGFDTVSYLAASASNAASWVHDNISPYYPAVNIKYIAVGNEVVGGTTESILPAMRNVNSALAAAGIGGIKVSTAVKSDVIANSYPPSAGVFAYPYMNGVAQYLASTGAPLLANVYPYFAYAGNPREISLNYATFQPGTTVRDDGNGLTYTNLFDAMVDCIYAALEKAGAGNVRVVVSESGWPSAEGFGASMDNARAYNQGLIDHVGRGTPKRPGQMEAYIFAMFNENQKTGAATERHFGLFYPNRSPVYQIAFPN |
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| Function | Glucan endo-1,3-beta-glucosidase GII [UniProtKB/Swiss-Prot:P15737] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0682900 | OsMH63_01T0682900.1 | Chr01 | 43425521 | 43428158 | + | maker | ||
| CDS seq | ATGGGAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGTCGCGGAGCGAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCGTCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACCTCGCCAACAACCCCTCCGCCGCCGCCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCCCCGTCGCACGGCGTGTTCAGCTCTGACGTGCAGCAGTTCATGGTTCCCATCGCGCGGTTCCTGGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCATACAGGGAAAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAGCGGCCTCACCTACACCAACCTGTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCAAACGTCCGCGTCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGGGAGGGTTCGCCGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACCTTATCCTCGTCCGGCCGTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGACCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGTCCATGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGCGCAACTCCGGAATCGACCTCATCCTCGACGCCGGCGGCTTCGACACGGTGTCCTACCTCGCCGCCAGCGCCTCCAACGCGGCGTCCTGGGTCCATGACAACATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATAGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCGTAGCCCAGTACCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCAACTACGCCACCTTCCAGCCGGGCACCACGGTGAGGGACGACGGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGGCGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGTTCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGACCGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAGGTCGCCGGTCTATCAGATTGCCTTTCCGAATTAG
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| Protein seq | MGAVNGVCYGVLGDNLPSRSEVVQLLKSQGIGAMRIYYPDKEALDALRGSGIAVIVDVGDSGAVANLANNPSAAADWVRDNVEAYWPSVIIRYITVGNELPAGDMGLILPAMQNVHKALVSAGLSSSIKVSTAIKMDVVANTFPPSHGVFSSDVQQFMVPIARFLANTVSPLLVNVYPYVSYRENPRDISLNYATFQPGTTVRDDGSGLTYTNLFNAMVDAVYAALEKAGTPNVRVAVSETGWPSAGGFAATAENAMNHNQGVIDNVKNGTPKRPGPLETYVFAMFNENQQTGDETRRHFGLFNPDKTPAYPITPYPRPAVQSIGVCYGMVGNDLPSRSEVVQMYVSMGINRMRIYNPDREALDALRNSGIDLILDAGGFDTVSYLAASASNAASWVHDNISPYYPAVNIKYIAVGNEVVGGTTESILPAMRNVNSALAAAGIGGIKVSTAVKSDVIANSYPPSAGVFAYPYMNGVAQYLASTGAPLLANVYPYFAYAGNPREISLNYATFQPGTTVRDDGNGLTYTNLFDAMVDCIYAALEKAGAGNVRVVVSESGWPSAEGFGASMDNARAYNQGLIDHVGRGTPKRPGQMEAYIFAMFNENQKTGAATERHFGLFYPNRSPVYQIAFPN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.005809 | 2.26332 | 0.078068 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0941200 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g71380 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0941200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0046650 | RBH | 0.0 | 31.250576 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0046160 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0046580 | RBH | 0.0 | 6.876177 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0046300 | SBH | 0.0 | 0.796859 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0045620 | RBH | 0.0 | 12.827074 | 1.487238 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0680400 | SBH | 0.0546205 | 0.163123 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0045160 | RBH | 0.0 | 9.446524 | 0.219806 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0684900 | SBH | 0.700218 | 17.2023075 | 0.0788825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0045920 | RBH | 0.0 | 1.052281 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0045760 | RBH | 0.0 | 55.179989 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046110 | SBH | 0.0 | 23.287109 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046050 | RBH | 0.0 | 0.440177 | 0.213896 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0045620 | RBH | 0.0 | 12.882791 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G046110 | RBH | 0.0 | 10.141820 | 0.300969 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0045830 | RBH | 0.0 | 0.000000 | 58.835526 |
