Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0622200 | OGI:01112290 | 13/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:39632557-39633527 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGACTAACTGGTTTAGAGGGCGATATCTGAAGCATACTGTGCAGTTACTCCCTAGATCCAGTGATACCCCCACTTGGAAGCTCATTATATCTCAGTTTAACACCTTAAGTGCTGCAACTCAGGTAACCCTTGGTAACGGCAAAACTACTCTGTTTTGGAAGGATAATTGGTTGCACCAACGGTTACAATTCACACACCCAATCCTATTCTCCTTTGCTTTGGATCAGGACTGCACGGTAGATTCACAGTTTACACAGAACTCCTGGCATGTCAAATTGCATCCTAACCTGTCCTACCAAGCAGAATTAGAGCTGCACTCGCTTATGCAAATTCTGCACAGGTTTAGCCCCATCCCTGAGACTCCTGACACAAGAGTTCTTTTGCATCCTGCACCCAAGTTCTCAACCTCAAATGCCTACCAACTTCTGACTTACCACGGAACCCTTTGGAAACCGACAGAATATGTCTGGATACACACCATCCCACAAAACTGTAAGATCTTCCTTTGGTTGGCTTTCAAAGACAGGCTTAACACCAAGGCGAATATGGTCAACAAATGCTGGAGCAAAGATCCGCACTGCCCTCTTTGCCCGGCACTAGAATCAGCTGACCACATCATCCAGAGATGCAAAAATGCTAATAGCCTATGGGAAAAAATGAACCTCCTGCACCTGGCAAACCATTCTGAATCGTCCTCAGCTTTTCTGCAAGCAGTCGTTGACAGAAATCATTCAAATAGAGGAATTGAACCTATCTGGTTTGCAGGTTGTGCATACACGTTGTGGAAAGCACGCAACAACATGATTTTTGAGAGACAAAATGACAACTTGTAATTCATCATTCAACAAATCTCAGACACACTAAAGCTCTGGAGCATGAGAGCCAATGAAGCAACCAAAGAACGAATTCTCTCCTGGTGTGCAGGGCTGTAGTTGTGACTTTACTTTGTATATACCCTTGTAATTCCAGC
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| CDS seq | ATGACTAACTGGTTTAGAGGGCGATATCTGAAGCATACTGTGCAGTTACTCCCTAGATCCAGTGATACCCCCACTTGGAAGCTCATTATATCTCAGTTTAACACCTTAAGTGCTGCAACTCAGGACTGCACGGTAGATTCACAGTTTACACAGAACTCCTGGCATGTCAAATTGCATCCTAACCTGTCCTACCAAGCAGAATTAGAGCTGCACTCGCTTATGCAAATTCTGCACAGGTTTAGCCCCATCCCTGAGACTCCTGACACAAGAGTTCTTTTGCATCCTGCACCCAAGTTCTCAACCTCAAATGCCTACCAACTTCTGACTTACCACGGAACCCTTTGGAAACCGACAGAATATGTCTGGATACACACCATCCCACAAAACTGTAAGATCTTCCTTTGGTTGGCTTTCAAAGACAGGCTTAACACCAAGGCGAATATGGTCAACAAATGCTGGAGCAAAGATCCGCACTGCCCTCTTTGCCCGGCACTAGAATCAGCTGACCACATCATCCAGAGATGCAAAAATGCTAATAGCCTATGGGAAAAAATGAACCTCCTGCACCTGGCAAACCATTCTGAATCGTCCTCAGCTTTTCTGCAAGCAGTCGTTGACAGAAATCATTCAAATAGAGGAATTGAACCTATCTGGTTTGCAGGTTGTGCATACACGTTGTGGAAAGCACGCAACAACATGATTTTTGAGAGACAAAATGACAACTTGTAA
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| Protein seq | MTNWFRGRYLKHTVQLLPRSSDTPTWKLIISQFNTLSAATQDCTVDSQFTQNSWHVKLHPNLSYQAELELHSLMQILHRFSPIPETPDTRVLLHPAPKFSTSNAYQLLTYHGTLWKPTEYVWIHTIPQNCKIFLWLAFKDRLNTKANMVNKCWSKDPHCPLCPALESADHIIQRCKNANSLWEKMNLLHLANHSESSSAFLQAVVDRNHSNRGIEPIWFAGCAYTLWKARNNMIFERQNDNL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0622200 | OsMH63_01T0622200.1 | Chr01 | 39632557 | 39633527 | + | maker | ||
| CDS seq | ATGACTAACTGGTTTAGAGGGCGATATCTGAAGCATACTGTGCAGTTACTCCCTAGATCCAGTGATACCCCCACTTGGAAGCTCATTATATCTCAGTTTAACACCTTAAGTGCTGCAACTCAGGACTGCACGGTAGATTCACAGTTTACACAGAACTCCTGGCATGTCAAATTGCATCCTAACCTGTCCTACCAAGCAGAATTAGAGCTGCACTCGCTTATGCAAATTCTGCACAGGTTTAGCCCCATCCCTGAGACTCCTGACACAAGAGTTCTTTTGCATCCTGCACCCAAGTTCTCAACCTCAAATGCCTACCAACTTCTGACTTACCACGGAACCCTTTGGAAACCGACAGAATATGTCTGGATACACACCATCCCACAAAACTGTAAGATCTTCCTTTGGTTGGCTTTCAAAGACAGGCTTAACACCAAGGCGAATATGGTCAACAAATGCTGGAGCAAAGATCCGCACTGCCCTCTTTGCCCGGCACTAGAATCAGCTGACCACATCATCCAGAGATGCAAAAATGCTAATAGCCTATGGGAAAAAATGAACCTCCTGCACCTGGCAAACCATTCTGAATCGTCCTCAGCTTTTCTGCAAGCAGTCGTTGACAGAAATCATTCAAATAGAGGAATTGAACCTATCTGGTTTGCAGGTTGTGCATACACGTTGTGGAAAGCACGCAACAACATGATTTTTGAGAGACAAAATGACAACTTGTAA
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| Protein seq | MTNWFRGRYLKHTVQLLPRSSDTPTWKLIISQFNTLSAATQDCTVDSQFTQNSWHVKLHPNLSYQAELELHSLMQILHRFSPIPETPDTRVLLHPAPKFSTSNAYQLLTYHGTLWKPTEYVWIHTIPQNCKIFLWLAFKDRLNTKANMVNKCWSKDPHCPLCPALESADHIIQRCKNANSLWEKMNLLHLANHSESSSAFLQAVVDRNHSNRGIEPIWFAGCAYTLWKARNNMIFERQNDNL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0161325 | 0.054459 | 0.032631 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g65270 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0784000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0013560 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0035280 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0177800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0035020 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0623000 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0035150 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0035200 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0035440 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0035510 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0035330 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G035810 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0035480 | SBH | 0.0 | 0.000000 | 0.000000 |
