Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_01G0583600 OGI:01105560 | 11/16 Minghui 63 | MH63RS3 | HZAU Chr01:37100418-37101544
Gene Symbol -
DNA seq

AGCTCGTACATGTACGCACCGCGACACTGCGAGTCCTGCAAGAAGCCAAGCCAAGCACACGAGCGCAGCAGCAGCAGCAGCAGCAGCTAAGCTAGCTAGCTTGGAGAGATCATCGGAGATGCCTCCCAACGCGGCGGAGGTGGCGCGGCCGAAGAGCCCGCTCCGGGGCATCCTGCCGCAGAGCCCACTCCGGATCAAGCAGGACGGCAAGTTCTACGAGCGGCTCCTCGCCAAGGAGAGGTCGGCGGCGAGCCGCTCCTTCCGCCACTACTGGGCCGCCGAGCCCGGCTCGGTGCCGTTCGTCTGGGAGTCGCAGCCTGGCACGCCCAAGGTCGACGTGTCCCGGATGGTCGCCGGCGCAGTCCCGGCCATCACCCCGCCGCCGTCGTACCTGCTCCGGCACGGCGGCAAGGCTGGCGCGGCGGCGCCGGCGGCGCCACGCCGTCGTCCGCAGGGGAAGGGCAAGGCGAAGACAGGCGGCAAGACGCGGTACAGGTTCAAGCGGATCAAGATCGGCTTCCTCGCCGGCATCTTCCGGAGGATCGCCCTCGGCCACGTGTGGCGGCGGTCGGCGGCGTCGGTCCAGGTCTCGTCGTTGTCAAGCCGGTGGCTCTTCTCCTCGGCGGCCACGGCGCCGGAGAAGGCCGAACACCTCGACCACGACACGCCCGCGCCACCGCCACCGCCAAGGCCGAACACCGAGCTGTCCACCCGGGCGCGCGCGCGTCCGAGCCTTTGGATGCTGCGATTTCGCGGATTCCGAAGCTGGAGCCGCGACGACGGTTGGGCGTAGGTCGCTCTCGACTTCTCGAGTGTATACGTGCGTCATCATGGGGGATTAGAACGTGACAAATGAATTGTTTATGGTTGCGAGAGATGTTAACGGTTGTTTGTATGCATGCTGTTGTTGCCTAGCGTTTCATGGAAATCATCATTAATTACGCGTTGATTATGTTTACGGATGAAACCCGACGTGTTCGGAACAGTTGATCATCTTTTGTCACTAGTTTAACAGGGTGATTAAAAGGATCATACACAATAATCTGATTAGTACGCTTGGTATTTTCTGTGATAAATTAATTTGATTTTCCCATATGGTCTCAGATATGTTTGGAGATGTAGCAAAG

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CDS seq

ATGCCTCCCAACGCGGCGGAGGTGGCGCGGCCGAAGAGCCCGCTCCGGGGCATCCTGCCGCAGAGCCCACTCCGGATCAAGCAGGACGGCAAGTTCTACGAGCGGCTCCTCGCCAAGGAGAGGTCGGCGGCGAGCCGCTCCTTCCGCCACTACTGGGCCGCCGAGCCCGGCTCGGTGCCGTTCGTCTGGGAGTCGCAGCCTGGCACGCCCAAGGTCGACGTGTCCCGGATGGTCGCCGGCGCAGTCCCGGCCATCACCCCGCCGCCGTCGTACCTGCTCCGGCACGGCGGCAAGGCTGGCGCGGCGGCGCCGGCGGCGCCACGCCGTCGTCCGCAGGGGAAGGGCAAGGCGAAGACAGGCGGCAAGACGCGGTACAGGTTCAAGCGGATCAAGATCGGCTTCCTCGCCGGCATCTTCCGGAGGATCGCCCTCGGCCACGTGTGGCGGCGGTCGGCGGCGTCGGTCCAGGTCTCGTCGTTGTCAAGCCGGTGGCTCTTCTCCTCGGCGGCCACGGCGCCGGAGAAGGCCGAACACCTCGACCACGACACGCCCGCGCCACCGCCACCGCCAAGGCCGAACACCGAGCTGTCCACCCGGGCGCGCGCGCGTCCGAGCCTTTGGATGCTGCGATTTCGCGGATTCCGAAGCTGGAGCCGCGACGACGGTTGGGCGTAG

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Protein seq

MPPNAAEVARPKSPLRGILPQSPLRIKQDGKFYERLLAKERSAASRSFRHYWAAEPGSVPFVWESQPGTPKVDVSRMVAGAVPAITPPPSYLLRHGGKAGAAAPAAPRRRPQGKGKAKTGGKTRYRFKRIKIGFLAGIFRRIALGHVWRRSAASVQVSSLSSRWLFSSAATAPEKAEHLDHDTPAPPPPPRPNTELSTRARARPSLWMLRFRGFRSWSRDDGWA

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_01G0583600 OsMH63_01T0583600.1 Chr01 37100418 37101544 + maker
CDS seq

ATGCCTCCCAACGCGGCGGAGGTGGCGCGGCCGAAGAGCCCGCTCCGGGGCATCCTGCCGCAGAGCCCACTCCGGATCAAGCAGGACGGCAAGTTCTACGAGCGGCTCCTCGCCAAGGAGAGGTCGGCGGCGAGCCGCTCCTTCCGCCACTACTGGGCCGCCGAGCCCGGCTCGGTGCCGTTCGTCTGGGAGTCGCAGCCTGGCACGCCCAAGGTCGACGTGTCCCGGATGGTCGCCGGCGCAGTCCCGGCCATCACCCCGCCGCCGTCGTACCTGCTCCGGCACGGCGGCAAGGCTGGCGCGGCGGCGCCGGCGGCGCCACGCCGTCGTCCGCAGGGGAAGGGCAAGGCGAAGACAGGCGGCAAGACGCGGTACAGGTTCAAGCGGATCAAGATCGGCTTCCTCGCCGGCATCTTCCGGAGGATCGCCCTCGGCCACGTGTGGCGGCGGTCGGCGGCGTCGGTCCAGGTCTCGTCGTTGTCAAGCCGGTGGCTCTTCTCCTCGGCGGCCACGGCGCCGGAGAAGGCCGAACACCTCGACCACGACACGCCCGCGCCACCGCCACCGCCAAGGCCGAACACCGAGCTGTCCACCCGGGCGCGCGCGCGTCCGAGCCTTTGGATGCTGCGATTTCGCGGATTCCGAAGCTGGAGCCGCGACGACGGTTGGGCGTAG

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Protein seq

MPPNAAEVARPKSPLRGILPQSPLRIKQDGKFYERLLAKERSAASRSFRHYWAAEPGSVPFVWESQPGTPKVDVSRMVAGAVPAITPPPSYLLRHGGKAGAAAPAAPRRRPQGKGKAKTGGKTRYRFKRIKIGFLAGIFRRIALGHVWRRSAASVQVSSLSSRWLFSSAATAPEKAEHLDHDTPAPPPPPRPNTELSTRARARPSLWMLRFRGFRSWSRDDGWA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.7204805 0.218943 0.463463

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0824900 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g60940 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0824900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0038620 SBH 0.0 2.112167 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0038120 RBH 0.0 0.804204 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0038530 RBH 0.0 2.512633 0.263261
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0037980 RBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0037600 SBH 0.726466 9.341597 3.047870
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0361900 RBH 0.767387 0 0.01275
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0037300 SBH 0.037037 0.081773 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0579700 RBH 0.2926825 0 0.686197
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0037540 RBH 0.0 0.096544 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0037560 RBH 0.0 19.178650 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0037790 SBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0037810 SBH 0.0 0.365023 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0037640 RBH 0.0 2.798503 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G038150 RBH 0.207590 0.0 0.452655
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0037830 RBH 0.000000 13.366194 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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