Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0361100 | OGI:01067150 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:22898807-22901441 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGAAGGTGGTGGACGTCCCAGTCGCCGGAAGGCCACTTGATTGGCTCCTCGTCGCCGATATACATGACGGCGAGAAGGTTGAGGAGGGACTGCCTGGTGCCCTGCACACCGGCGACGGCTTCGTAGAGCCTCTCGATGACGAAGAAGGGGATTGTCGGGGTATGAAGTCGCTGCCGACTTCATTGGTAGGCGGATCCAGCCACTCCAGGCTCGAGCCCATCCAGCCTTTGATTATTCTGGGCCGGAGGACGTGACCTGGGTTTCTCCTCGGGGTATTTTTCTTTGTAGTTAAATTGACTCCATTATGTGCGTGTTCCTCCCGACTTATTGGATTCTGATCTCGATTTATAGGCTTGGACAGCGCGACCGTGGAGCGCCGCGTCGGCCAATTGATAATCAGTGGCCCGACAACGGCGAGCAACGTCCCCGTCCCCCTTTGCGAGAAAGGGGTAGCCGAACGTGAAGCTGCCATCAATGTAAGTGTACCCAGCGGCCCTTCTGCATTTTTCTTCCGGGATTGCATTATAACTTCATGAAGCGTAGGCTCTCCCTCTGACTGATATCATCGGGCCGCTCGTGGACCACCAGGTGGCGACGTCGCTGAAGGAGAAAGTCGCCAAGGAGGTGTCTGACGTTGTTGCCGCTGCTGCCAAAACGAGTGGCGGCAACGTTCCGAAAAAGGGGAGGAAATTCTCCTCTGTGGTCGGACATCATCGGAAGACACCCACCCCCTCGGTAAGTTCTCCTGTTCTTTCATCATGTAGTCCGGAAAACTTCCACCTCACATCATATCCGTTATACTCCAGGCCTCGGACGCGTCTCCCCCGCCTCCGCGACGGCAGCGGCTTGTGACACTTGGCGAGAAGTAAGTGGATGACTTTGAGGTTTCGTCACTTTGTCAAACTGTTGCAGCCTGTCTCAGTTGCAGCTTTTCGTAGGGTGGCGCGGGCGAAGGCGGTGCAAGACGGGTCTGGAGGGACCTCCAGCGCGTCTCCTGTTGTGGCCTCGACGGACGTCGTGGTCGTGCCCAGGAGCCGCGAGGCGACACCTAGCGGCCCAGCCAGCGATCTCGCGGCTGGTCGGGGTCCGTCGGCTGCCATCCTCACCTGGGAGGAGCTCCAGGTCGAGATGGGGCGCCTCCTCGAGGCTGGTGCTTGCGGCATTAGCCGCGAGATCGTGAAGGCGAGGGCGGCGGCGGCATCGTCGGCGAATGAGCGCACCGACCGGCTGGCGCGCGATTTGGCGGAGGTTCGCGAGGACCTCCAGAAGATGCGGGAGCTGGTGGCTGGCAATGAGCGACAACAGCAAGGGCTCGAGTATTGTATGTCGGAGCTTGAGAACCACTTGTCGGAGATCCGTGGCTCACGGCAGGTCACCTACACCGGTCTGCACCAGCTCGCCGGGGAGTGCGGCGTCAAGGCCACCATCCCGGCGAATCCCGACGAGTTCTCGCTGATGTCTTCGCTTGCGGAACTGGCGACGGCGATGGAGGCGATTCCCTCCAAGCACGCGGCCAGGATCGGAGAGGAGACGTCCAACGGGATCTATACCGGGACGTGCCATGTCCTTGCGTGTGTGAGGCTAGCGCACCCTGAACTCGATCTACGGAAGATCTTGGATCAGGGGACGGCTAGCGATGCGCGCAAGGATGTGATGGAGGAGGTTGGTGATCTGGGGGAGTCCGTCCTCCCGCTTTTTGAAGAGTAGGATCTTAGCTCTCTTGTACTCTTTAGTCATGCTTTGTAAAACTCTCATTGGTTCCAACTGCCTTTGTGTGTGTGGTCATCACCTTAGCTTTCTTTAGCATTGTGATCTTGAGTACTTTGTTGTCGTTTGTAGAGATGTTGGTGTCGAGGATGTCCAGCAGCGCGGACAGCCTGAGTTACCAGTGATCGTTCCGGCACTTGCGTTCGAGCCACATGTGCCGGGGGGCCATGTAGATCAAAGTTCGCCTGTGGAAACGAGCATGGCAACGACTCCCTTAGGTTGGTTGTCTTTGTTATCATTTCCTTTACCCTTCCGTCTAGATCGACTTGATTTGCTATATTCTCGGGAGAGAAGAGCAGCTTGACTTAATCGTTTCCATGCTAAGCAGACATCGAGAGTGCGCTTGCTAACCAGGATCGTCGCATGCAGTATTGGAGGACGAAGTTTGAGGTTGCGGAACACGAGAGGACTATGTTGGAAGTGAAGAAGGACCAGGCCGTAGAGACACTCCGAGGTCGTGAGGTGTGGTTCAACTCGTATCTGAAGAGTTGATGCACGTCCATGTCAAGAGTCTGTAGAGAGCTCCGAGTACCCCGTGGGGATCCCAAGGAATCGACGGCCGGATACATATCGACGGCCGGATACATCTCGTGGCTGAATGGGGCCTGCACCCAGCTCGAAGGCATCGGTCAACGTATCGACGAGGCCTTGAAGCAGGAGTGTCGTCGATCAAGCCGATATGCCGGGGGGCATGTGTTGGCTTGCATTCAAGATCATCGTCCGCTGCTGCACCTCGAGTTCCTCCGCGAAGGGTTTTGTCGTTCTCGGAGAACTCCTACGGAGATAGATGGCCTGGCGAAGTCGATGGTGCCGCTGGCGGAGAAGGTCTTCCAGTCCATGGACTGGCGTTGGCCTTCCTGGTAG
More
|
||||||||||
| CDS seq | ATGGAGAAGGTGGTGGACGTCCCAGTCGCCGGAAGGCCACTTGATTGGCTCCTCGTCGCCGATATACATGACGGCGAGAAGGTTGAGGAGGGACTGCCTGGTGCCCTGCACACCGGCGACGGCTTCGTAGAGCCTCTCGATGACGAAGAAGGGGATTGTCGGGGCTTGGACAGCGCGACCGTGGAGCGCCGCGTCGGCCAATTGATAATCAGTGGCCCGACAACGGCGAGCAACGTCCCCGTCCCCCTTTGCGAGAAAGGGGTAGCCGAACGTGAAGCTGCCATCAATGTAAGTGTACCCAGCGGCCCTTCTTGGATGACTTTGAGGTTTCGTCACTTTGTCAAACTGTTGCAGCCTGTCTCAGTTGCAGCTTTTCGTAGGGTGGCGCGGGCGAAGGCGGTGCAAGACGGGTCTGGAGGGACCTCCAGCGCGTCTCCTGTTGTGGCCTCGACGGACGTCGTGGTCGTGCCCAGGAGCCGCGAGGCGACACCTAGCGGCCCAGCCAGCGATCTCGCGGCTGGTCGGGGTCCGTCGGCTGCCATCCTCACCTGGGAGGAGCTCCAGGTCGAGATGGGGCGCCTCCTCGAGGCTGGTGCTTGCGGCATTAGCCGCGAGATCGTGAAGGCGAGGGCGGCGGCGGCATCGTCGGCGAATGAGCGCACCGACCGGCTGGCGCGCGATTTGGCGGAGGTTCGCGAGGACCTCCAGAAGATGCGGGAGCTGGTGGCTGGCAATGAGCGACAACAGCAAGGGCTCGAGTATTGTATGTCGGAGCTTGAGAACCACTTGTCGGAGATCCGTGGCTCACGGCAGGTCACCTACACCGGTCTGCACCAGCTCGCCGGGGAGTGCGGCGTCAAGGCCACCATCCCGGCGAATCCCGACGAGTTCTCGCTGATGTCTTCGCTTGCGGAACTGGCGACGGCGATGGAGGCGATTCCCTCCAAGCACGCGGCCAGGATCGGAGAGGAGACGTCCAACGGGATCTATACCGGGACGTGCCATGTCCTTGCGTGTGTGAGGCTAGCGCACCCTGAACTCGATCTACGGAAGATCTTGGATCAGGGGACGGCTAGCGATGCGCGCAAGGATGTGATGGAGGAGGTTGGTGATCTGGGGGAGTCCGTCCTCCCGCTTTTTGAAGAAGATGTTGGTGTCGAGGATGTCCAGCAGCGCGGACAGCCTGAGTTACCAGTGATCGTTCCGGCACTTGCGTTCGAGCCACATGTGCCGGGGGGCCATGTAGATCAAAGTTCGCCTGTGGAAACGAGCATGGCAACGACTCCCTTAGACATCGAGAGTGCGCTTGCTAACCAGGATCGTCGCATGCAGTATTGGAGGACGAAGTTTGAGGTTGCGGAACACGAGAGGACTATGTTGGAAGTGAAGAAGGACCAGGCCGTAGAGACACTCCGAGGTCGTGAGGAATCGACGGCCGGATACATATCGACGGCCGGATACATCTCGTGGCTGAATGGGGCCTGCACCCAGCTCGAAGGCATCGGTCAACGTATCGACGAGGCCTTGAAGCAGGAGTGTCGTCGATCAAGCCGATATGCCGGGGGGCATGTGTTGGCTTGCATTCAAGATCATCGTCCGCTGCTGCACCTCGAGTTCCTCCGCGAAGGGTTTTGTCGTTCTCGGAGAACTCCTACGGAGATAGATGGCCTGGCGAAGTCGATGGTGCCGCTGGCGGAGAAGGTCTTCCAGTCCATGGACTGGCGTTGGCCTTCCTGGTAG
More
|
||||||||||
| Protein seq | MEKVVDVPVAGRPLDWLLVADIHDGEKVEEGLPGALHTGDGFVEPLDDEEGDCRGLDSATVERRVGQLIISGPTTASNVPVPLCEKGVAEREAAINVSVPSGPSWMTLRFRHFVKLLQPVSVAAFRRVARAKAVQDGSGGTSSASPVVASTDVVVVPRSREATPSGPASDLAAGRGPSAAILTWEELQVEMGRLLEAGACGISREIVKARAAAASSANERTDRLARDLAEVREDLQKMRELVAGNERQQQGLEYCMSELENHLSEIRGSRQVTYTGLHQLAGECGVKATIPANPDEFSLMSSLAELATAMEAIPSKHAARIGEETSNGIYTGTCHVLACVRLAHPELDLRKILDQGTASDARKDVMEEVGDLGESVLPLFEEDVGVEDVQQRGQPELPVIVPALAFEPHVPGGHVDQSSPVETSMATTPLDIESALANQDRRMQYWRTKFEVAEHERTMLEVKKDQAVETLRGREESTAGYISTAGYISWLNGACTQLEGIGQRIDEALKQECRRSSRYAGGHVLACIQDHRPLLHLEFLREGFCRSRRTPTEIDGLAKSMVPLAEKVFQSMDWRWPSW |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0361100 | OsMH63_01T0361100.1 | Chr01 | 22898807 | 22901441 | + | maker | ||
| CDS seq | ATGGAGAAGGTGGTGGACGTCCCAGTCGCCGGAAGGCCACTTGATTGGCTCCTCGTCGCCGATATACATGACGGCGAGAAGGTTGAGGAGGGACTGCCTGGTGCCCTGCACACCGGCGACGGCTTCGTAGAGCCTCTCGATGACGAAGAAGGGGATTGTCGGGGCTTGGACAGCGCGACCGTGGAGCGCCGCGTCGGCCAATTGATAATCAGTGGCCCGACAACGGCGAGCAACGTCCCCGTCCCCCTTTGCGAGAAAGGGGTAGCCGAACGTGAAGCTGCCATCAATGTAAGTGTACCCAGCGGCCCTTCTTGGATGACTTTGAGGTTTCGTCACTTTGTCAAACTGTTGCAGCCTGTCTCAGTTGCAGCTTTTCGTAGGGTGGCGCGGGCGAAGGCGGTGCAAGACGGGTCTGGAGGGACCTCCAGCGCGTCTCCTGTTGTGGCCTCGACGGACGTCGTGGTCGTGCCCAGGAGCCGCGAGGCGACACCTAGCGGCCCAGCCAGCGATCTCGCGGCTGGTCGGGGTCCGTCGGCTGCCATCCTCACCTGGGAGGAGCTCCAGGTCGAGATGGGGCGCCTCCTCGAGGCTGGTGCTTGCGGCATTAGCCGCGAGATCGTGAAGGCGAGGGCGGCGGCGGCATCGTCGGCGAATGAGCGCACCGACCGGCTGGCGCGCGATTTGGCGGAGGTTCGCGAGGACCTCCAGAAGATGCGGGAGCTGGTGGCTGGCAATGAGCGACAACAGCAAGGGCTCGAGTATTGTATGTCGGAGCTTGAGAACCACTTGTCGGAGATCCGTGGCTCACGGCAGGTCACCTACACCGGTCTGCACCAGCTCGCCGGGGAGTGCGGCGTCAAGGCCACCATCCCGGCGAATCCCGACGAGTTCTCGCTGATGTCTTCGCTTGCGGAACTGGCGACGGCGATGGAGGCGATTCCCTCCAAGCACGCGGCCAGGATCGGAGAGGAGACGTCCAACGGGATCTATACCGGGACGTGCCATGTCCTTGCGTGTGTGAGGCTAGCGCACCCTGAACTCGATCTACGGAAGATCTTGGATCAGGGGACGGCTAGCGATGCGCGCAAGGATGTGATGGAGGAGGTTGGTGATCTGGGGGAGTCCGTCCTCCCGCTTTTTGAAGAAGATGTTGGTGTCGAGGATGTCCAGCAGCGCGGACAGCCTGAGTTACCAGTGATCGTTCCGGCACTTGCGTTCGAGCCACATGTGCCGGGGGGCCATGTAGATCAAAGTTCGCCTGTGGAAACGAGCATGGCAACGACTCCCTTAGACATCGAGAGTGCGCTTGCTAACCAGGATCGTCGCATGCAGTATTGGAGGACGAAGTTTGAGGTTGCGGAACACGAGAGGACTATGTTGGAAGTGAAGAAGGACCAGGCCGTAGAGACACTCCGAGGTCGTGAGGAATCGACGGCCGGATACATATCGACGGCCGGATACATCTCGTGGCTGAATGGGGCCTGCACCCAGCTCGAAGGCATCGGTCAACGTATCGACGAGGCCTTGAAGCAGGAGTGTCGTCGATCAAGCCGATATGCCGGGGGGCATGTGTTGGCTTGCATTCAAGATCATCGTCCGCTGCTGCACCTCGAGTTCCTCCGCGAAGGGTTTTGTCGTTCTCGGAGAACTCCTACGGAGATAGATGGCCTGGCGAAGTCGATGGTGCCGCTGGCGGAGAAGGTCTTCCAGTCCATGGACTGGCGTTGGCCTTCCTGGTAG
More
|
|||||||
| Protein seq | MEKVVDVPVAGRPLDWLLVADIHDGEKVEEGLPGALHTGDGFVEPLDDEEGDCRGLDSATVERRVGQLIISGPTTASNVPVPLCEKGVAEREAAINVSVPSGPSWMTLRFRHFVKLLQPVSVAAFRRVARAKAVQDGSGGTSSASPVVASTDVVVVPRSREATPSGPASDLAAGRGPSAAILTWEELQVEMGRLLEAGACGISREIVKARAAAASSANERTDRLARDLAEVREDLQKMRELVAGNERQQQGLEYCMSELENHLSEIRGSRQVTYTGLHQLAGECGVKATIPANPDEFSLMSSLAELATAMEAIPSKHAARIGEETSNGIYTGTCHVLACVRLAHPELDLRKILDQGTASDARKDVMEEVGDLGESVLPLFEEDVGVEDVQQRGQPELPVIVPALAFEPHVPGGHVDQSSPVETSMATTPLDIESALANQDRRMQYWRTKFEVAEHERTMLEVKKDQAVETLRGREESTAGYISTAGYISWLNGACTQLEGIGQRIDEALKQECRRSSRYAGGHVLACIQDHRPLLHLEFLREGFCRSRRTPTEIDGLAKSMVPLAEKVFQSMDWRWPSW
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g38140 | RBH | 0.0 | 0.0 | 0.103959 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0021780 | SBH | 0.0 | 0.0 | 0.208102 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0021390 | SBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0021700 | SBH | 0.0 | 0.0 | 0.823553 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0021090 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0209700 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0352600 | RBH | 0 | 0 | 0.003919 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G020270 | SBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0019990 | SBH | 0.0 | 0.0 | 0.667775 |
