Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0313700 | OGI:01058840 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:19877089-19880378 | ||||||||
| Gene Symbol | PDR14, OsABCG33, OsPDR14 | ||||||||||
| DNA seq | TAAGAAAGAGAGAGTTTAAGCAAACTGTACATGCAAGAAAACAAACAGAGCCAAAGCTCACATACAGAACCAGGAGACTGGTTCACCACATACACACGCGCTAGCTAGCTAGCCGATCCCAGCAACCGGAGGGCCACTCGCACTGATCGCGCATAGAAGCCCCGCCGCCTTCCAAGACTCCCATTCCTCCGCGATGGATGCGCAAACCTGCTCCGCCGATGCAGCTTTTCCGTCGAAGATTCTAGCATTGCGTTCTTTCCAAACAAGGCGTCGAAGGTTTTTCGGTCCTGCTTGTGCACAGTTTTGCGAGCCGTGTACCACCAATTGATTAAACCCTCCGATGGTGTGGAACAGGGGAGGTCCAGCCGGCTACGAATCCGCGTCCAAACTTGCTGCGTGAAGGGGCAGTCATGGTAGATGTGTGAGCAGGATTCACCGTCAGCCAAGCATAAATGACAAATCGAAGCCATTTGCCAACCCCGTCGCTGGAGATTGTCAGTGGTCAAGCAAGCTCCTCGCATCGCCAAAAACATGAAGAACTTGCATCTAGTCGGCGCCCTAGACTTCCAAATGATTTTCCCGATTGCCGACCTCGTCTTGCCGGCACAGAGAAGAGAGTAGGCTGATTTTACTGAGAAAACACCATTGGCCTCTGCCAACCAAACTCGATGTGTCCAGGAAAACACCCTGTACCAAGTCCCAGATGGCGAGATATTCAGCGATGGCCTGAATTGAGAGACCTCCCCTGATGTCAGTAACCCAAGCATTGCCCTGGAGAGCTGCAGCCACAGAACGGCTCCTATTTTTGACAAAAGAGCATAGGATCGGTGCCATCGACAGGATTGAGCCTCCCTCCGGTAACCAATTGTATGTCCAAAATGCTGCTCTATTCCCATCACCGAGCAACACTCTGCATCCCGCCGCCAGGCATTGTTCTGCCTTTTTGTCCACTAATAACGGCAGGGTAACCCAGGGACGATCTGGATGCAATAATTATTTCTCTTTTTCTTTTTCTCTAAATGGCATGGCAAGAGAACTCATGTCACTGCATTAGGACAGAGCTATAGTAACACGTCTGTATGCTCCTGTACTCGAAGAGGAATTAGTGAGGCTTATAGGAACTCCATTTTTGTATAGCACCATTTATTAAGAAATTATTGCCAACTCATAAATATGAAAAGGTTATCAAAAAAATCTTTTATAACCATCACATGCCCTTGTTCTGCGTATGAAGTCTAATGCTTTTGACATCAATCCATATACATGACGACTTGATTAGAGAACACAAGTCTCAATGAAAAGTACTTTATTTTTCCAACGCAAGAATCAAATATATAATCGCTTGTGCTGTCTGCACACTTGCATCGCATGTTGTATAAAAGTCACAAGTGTGTACTATAATATATATTATATACAGTTACCTGCCATGTAGATTAACATGCCTTTTACTCTTCAAGAAATGCAGTTGGAGGCAATGGTAAGATTTTACACCAACTGCCACTTTGTCTTCCATAACTGCAAATATATAAAGGTATTAATGGCCCTGTTTGGATCCGTCCAGAATCTCGTTATTTAAGAGTATTAAACGTAAATTACTGACAAAACTCATTCCATAACCCCTAGGCTATTTTGCGAGACGAATCTAACGAGGTATATTAATCCATGATTTGCTACAGTAATGCTACAGTAATCAGCTGCTAATCATGGATTAATATACATCATTAGATTCGTCTCGCAAAATAGCCTAGGGGTTATGGAATCGGTTTTGTCGGTAATCTACGTTGAATAATCCTAAATAGCAAGATTCCAGAGGGCTATTTAATAGCCCGGAGGATCCAAACAAAGCCAATGTGCCGTTTGCAAGATTTTTACAAAAAGTTTAATATTTGCATATGAGTATACATACGTGGTCAATTTGTTTCAGACAATCATTCATATACATTTTGGGCCTGTTCACTTTGATGCTAAAAAAAACCTTACTAAATTTTGGCATTACCAAAATTTTGGCTAGTAGGATTTCTTATATAGTTACCAAAATTTGGCAGCAAACTAAATGTAGCCACTTTTTTAACAACTTTACCAAAATTTGGTAAGGTTGAAAATGACATCAAAGTGAACAGTCCCTTTAGCTTATCGGATGATCATTTATTTTTATTTATTTTATTTTGAACTTTGTACTTACTTGGTAGCTCTTATAATGCATGGAGTGGATACTAATATCCTTGAAGATGAAAAGACTGTTTTTTTGTCATAGTGGTAGAGTTTGAACTATGCAAAATGGCACACCTTCTGTTGTATATGCAAGCAGCAAGCACAATAAACGCAATATAAACAGGTGTTTTTAAAAAATGCAACATAAACTGGTCCATGGAAAATTAAACCATCAGATGTAACCCTTTTCTATTGGTGGCTAAGCCAGAAAATAGTGCCTTTTTATTTTTCTCCTTTAAATGGGTAGTACCTGTTCATTTCTTTTCTCCAATAAATATCAGTATTTCCATAAAGCTATTTTGAGAATTTATTAATAAGTATTTCTGTTTAAATAATCCTAGTAACTTAGAAGGTAGAGTCTCCAATGCCAGACAACTAGAGAAAACTGTAAACACTCAAGCTCTAAAGTTCGTCAAGCGCTGACGAAAGGCACGTTAGCCAGCAGCAGCTCCAACTCTCTGCAACTTGATGCAGCGAAGTCTCCACCTCACCGCCGTGGAGAGTTGCTTTTTACATGGGCTTGATAGGCTGAAAGATTGTACCTGAAGAAACTGAGCTCGAACTCCATCAGAGGTGAGCGCTCGCGCAAGAGGCGGAGATGACTGACGAACTTGTTGAACGCCGCCGCACCGCCACAGCTCCCTGTGACGCGCAGGACGGGCACCGACTTCCAGACGTCGCACCAGCAGCCGGGGGAACACGAGAACCGGAGCACGCACGTCTCATTGCAAGACGGAAGGAGAGCACGTACCGGAGGACCGCGTTCGGGAATCGGGAGGGATCCAATCCGCTCCTCGCCGCTCGACGCGGCTGTTCGGCTGCGCTTCTCGCTCGGAGGCATTCCGTCGAACAGGCGGCGGGCGCCGATGCCTGCGTGATCGGAATTCGGAAAGACTTGAGACAACGGCAACAAGTACCACCACGCGCGGAAATAGGTCATACAATACAGGGGAAGCTCGCTTCAACTCACACATCGGAATATCTGACGCCGGCGGGAACGCAAGACGACCGGAGGAGAAGCCGCCTGAGCACCACCCTCGTCGGCAACTGGAAGGAAGAGCGATCGGTTGGTTTGCGGC
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| CDS seq | ATGGGAATAGAGCAGCATTTTGGACATACAATTGGTTACCGGAGGGAGGCTCAATCCTGTCGATGGCACCGATCCTATGCTCTTTTGTCAAAAATAGGAGCCGTTCTGTGGCTGCAGCTCTCCAGGGCAATGCTTGGGTTACTGACATCAGGGGAGGTCTCTCAATTCAGGCCATCGCTGAATATCTCGCCATCTGGGACTTGGTACAGGGTGTTTTCCTGGACACATCGAGTTTGGTTGGCAGAGGCCAATGGTGTTTTCTCAGTAAAATCAGCCTACTCTCTTCTCTGTGCCGGCAAGACGAGGTCGGCAATCGGGAAAATCATTTGGAAGTCTAGGGCGCCGACTAGATGCAAGTTCTTCATGTTTTTGGCGATGCGAGGAGCTTGCTTGACCACTGACAATCTCCAGCGACGGGGTTGGCAAATGGCTTCGATTTGTCATTTATGCTTGGCTGACGGTGAATCCTGCTCACACATCTACCATGACTGCCCCTTCACGCAGCAAGTTTGGACGCGGATTCGTAGCCGGCTGGACCTCCCCTGTTCCACACCATCGGAGGGTTTAATCAATTGGTGGTACACGGCTCGCAAAACTGTGCACAAGCAGGACCGAAAAACCTTCGACGCCTTGTTTGGAAAGAACGCAATGCTAGAATCTTCGACGGAAAAGCTGCATCGGCGGAGCAGGTTTGCGCATCCATCGCGGAGGAATGGGAGTCTTGGAAGGCGGCGGGGCTTCTATGCGCGATCAGTGCGAGTGGCCCTCCGGTTGCTGGGATCGGCTAGCTAG
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| Protein seq | MGIEQHFGHTIGYRREAQSCRWHRSYALLSKIGAVLWLQLSRAMLGLLTSGEVSQFRPSLNISPSGTWYRVFSWTHRVWLAEANGVFSVKSAYSLLCAGKTRSAIGKIIWKSRAPTRCKFFMFLAMRGACLTTDNLQRRGWQMASICHLCLADGESCSHIYHDCPFTQQVWTRIRSRLDLPCSTPSEGLINWWYTARKTVHKQDRKTFDALFGKNAMLESSTEKLHRRSRFAHPSRRNGSLGRRRGFYARSVRVALRLLGSAS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0313700 | OsMH63_01T0313700.1 | Chr01 | 19877089 | 19880378 | - | maker | ||
| CDS seq | ATGGGAATAGAGCAGCATTTTGGACATACAATTGGTTACCGGAGGGAGGCTCAATCCTGTCGATGGCACCGATCCTATGCTCTTTTGTCAAAAATAGGAGCCGTTCTGTGGCTGCAGCTCTCCAGGGCAATGCTTGGGTTACTGACATCAGGGGAGGTCTCTCAATTCAGGCCATCGCTGAATATCTCGCCATCTGGGACTTGGTACAGGGTGTTTTCCTGGACACATCGAGTTTGGTTGGCAGAGGCCAATGGTGTTTTCTCAGTAAAATCAGCCTACTCTCTTCTCTGTGCCGGCAAGACGAGGTCGGCAATCGGGAAAATCATTTGGAAGTCTAGGGCGCCGACTAGATGCAAGTTCTTCATGTTTTTGGCGATGCGAGGAGCTTGCTTGACCACTGACAATCTCCAGCGACGGGGTTGGCAAATGGCTTCGATTTGTCATTTATGCTTGGCTGACGGTGAATCCTGCTCACACATCTACCATGACTGCCCCTTCACGCAGCAAGTTTGGACGCGGATTCGTAGCCGGCTGGACCTCCCCTGTTCCACACCATCGGAGGGTTTAATCAATTGGTGGTACACGGCTCGCAAAACTGTGCACAAGCAGGACCGAAAAACCTTCGACGCCTTGTTTGGAAAGAACGCAATGCTAGAATCTTCGACGGAAAAGCTGCATCGGCGGAGCAGGTTTGCGCATCCATCGCGGAGGAATGGGAGTCTTGGAAGGCGGCGGGGCTTCTATGCGCGATCAGTGCGAGTGGCCCTCCGGTTGCTGGGATCGGCTAGCTAG
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| Protein seq | MGIEQHFGHTIGYRREAQSCRWHRSYALLSKIGAVLWLQLSRAMLGLLTSGEVSQFRPSLNISPSGTWYRVFSWTHRVWLAEANGVFSVKSAYSLLCAGKTRSAIGKIIWKSRAPTRCKFFMFLAMRGACLTTDNLQRRGWQMASICHLCLADGESCSHIYHDCPFTQQVWTRIRSRLDLPCSTPSEGLINWWYTARKTVHKQDRKTFDALFGKNAMLESSTEKLHRRSRFAHPSRRNGSLGRRRGFYARSVRVALRLLGSAS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0631425 | 0.1540045 | 0.0940015 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g33260 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0311400 | RBH | 0.061199 | 0.093954 | 0.8411135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0018730 | RBH | 0.0 | 0.0 | 0.0 |
