Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0252700 | OGI:01046870 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:15546594-15547567 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAAGCATATCTCAGCAAGTGAGGCCATCTCATAAATTTCTCGTAGGTCTGCTTAGGATCTACTATTTCTACAGTGGTTTTATGTTCTTGTCTCTGGAGGAAGTGATGACACAAGTTCTGCTTGTCCCCCATAGAACTGAGGAATATTGGCTTTTTTCGAGTTAGGAGCTCAATAAGGATTACACCAAAACTATAAACATCACTTTTCTCATTTAGTTTTCCTGTATGATAATATTCTGGATCCAAGTACCCAAATGTACCTTGCACAATTGTAACCACATGCGTCTCATCAATAGAAACAGATCTTGATGCACCAAAGTCTGAAACCTTTGTGATGAAATTGTCATCAAGAAGTATATTGCCAGATTTCACATCTCTATGAAATATGGTATTGAGGCAGCATAATGGAGATAGGAGATAGCCCTTGCAGCCTCGAGCAATTCTGATACGATCACCCCAAGTTAGCAAGCACTTTTTAGTCAAATCACCATGAAGAAGGTCATAGAGTGTGCCATTGGAGATGAATTAATACACAAGTAAAGGTACCTCCGATTCAAGACAACAGCCATACAACTTTACCACATTTCGATGAATAACTTGAGATAAGATGGCAACTTCATTTACAAATTGATCAACCTCAGTTTGCTCAACAATTTTGGATCTTTTAATTGCTACCACTCTTTGGTCAGATAAAATCCCCTTGTAAACTGTTCCATGACCTCCGTGGCCAACAATACGGGTTGAATCAAAATTATTTGTTGCCTTCTCTAGTTCATCCAAGGAAAATATCTTTGTATTATGTGCAATACTTTCATCCGATGAAATCAGTTGCTCCAATATCATGCCTTTATTTCTTCGAAAGTATGCCCTCCTAATTTTCATTTGGATGCGCCTCTTCCACCTCTTGACTAATGCAATTGAACTTATGACGAGGGCTAGTACGCTAAAACCACAAATGAGTCCAATAGCAACTC
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| CDS seq | ATGAAAATTAGGAGGGCATACTTTCGAAGAAATAAAGGCATGATATTGGAGCAACTGATTTCATCGGATGAAAGTATTGCACATAATACAAAGATATTTTCCTTGGATGAACTAGAGAAGGCAACAAATAATTTTGATTCAACCCGTATTGTTGGCCACGGAGGTCATGGAACAGTTTACAAGGGGATTTTATCTGACCAAAGAGTGGTAGCAATTAAAAGATCCAAAATTGTTGAGCAAACTGAGGTTGATCAATTTGTAAATGAAGTTGCCATCTTATCTCAAGTTATTCATCGAAATGTGGTAAAGTTGTATGGCTGTTGTCTTGAATCGGAGTGCTTGCTAACTTGGGGTGATCGTATCAGAATTGCTCGAGGCTGCAAGGGCTATCTCCTATCTCCATTATGCTGCCTCAATACCATATTTCATAGAGATGTGAAATCTGGCAATATACTTCTTGATGACAATTTCATCACAAAGGTTTCAGACTTTGGTGCATCAAGATCTGTTTCTATTGATGAGACGCATGTGGTTACAATTGTGCAAGGTACATTTGGGTACTTGGATCCAGAATATTATCATACAGGAAAACTAAATGAGAAAAGTGATGTTTATAGTTTTGGTGTAATCCTTATTGAGCTCCTAACTCGAAAAAAGCCAATATTCCTCAGTTCTATGGGGGACAAGCAGAACTTGTGTCATCACTTCCTCCAGAGACAAGAACATAAAACCACTGTAGAAATAGTAGATCCTAAGCAGACCTACGAGAAATTTATGAGATGGCCTCACTTGCTGAGATATGCTTAA
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| Protein seq | MKIRRAYFRRNKGMILEQLISSDESIAHNTKIFSLDELEKATNNFDSTRIVGHGGHGTVYKGILSDQRVVAIKRSKIVEQTEVDQFVNEVAILSQVIHRNVVKLYGCCLESECLLTWGDRIRIARGCKGYLLSPLCCLNTIFHRDVKSGNILLDDNFITKVSDFGASRSVSIDETHVVTIVQGTFGYLDPEYYHTGKLNEKSDVYSFGVILIELLTRKKPIFLSSMGDKQNLCHHFLQRQEHKTTVEIVDPKQTYEKFMRWPHLLRYA |
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| Function | Wall-associated receptor kinase-like 22 [UniProtKB/Swiss-Prot:Q8RY17] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0252700 | OsMH63_01T0252700-mRNA-1 | Chr01 | 15546594 | 15547567 | - | maker | ||
| CDS seq | ATGAAAATTAGGAGGGCATACTTTCGAAGAAATAAAGGCATGATATTGGAGCAACTGATTTCATCGGATGAAAGTATTGCACATAATACAAAGATATTTTCCTTGGATGAACTAGAGAAGGCAACAAATAATTTTGATTCAACCCGTATTGTTGGCCACGGAGGTCATGGAACAGTTTACAAGGGGATTTTATCTGACCAAAGAGTGGTAGCAATTAAAAGATCCAAAATTGTTGAGCAAACTGAGGTTGATCAATTTGTAAATGAAGTTGCCATCTTATCTCAAGTTATTCATCGAAATGTGGTAAAGTTGTATGGCTGTTGTCTTGAATCGGAGTGCTTGCTAACTTGGGGTGATCGTATCAGAATTGCTCGAGGCTGCAAGGGCTATCTCCTATCTCCATTATGCTGCCTCAATACCATATTTCATAGAGATGTGAAATCTGGCAATATACTTCTTGATGACAATTTCATCACAAAGGTTTCAGACTTTGGTGCATCAAGATCTGTTTCTATTGATGAGACGCATGTGGTTACAATTGTGCAAGGTACATTTGGGTACTTGGATCCAGAATATTATCATACAGGAAAACTAAATGAGAAAAGTGATGTTTATAGTTTTGGTGTAATCCTTATTGAGCTCCTAACTCGAAAAAAGCCAATATTCCTCAGTTCTATGGGGGACAAGCAGAACTTGTGTCATCACTTCCTCCAGAGACAAGAACATAAAACCACTGTAGAAATAGTAGATCCTAAGCAGACCTACGAGAAATTTATGAGATGGCCTCACTTGCTGAGATATGCTTAA
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| Protein seq | MKIRRAYFRRNKGMILEQLISSDESIAHNTKIFSLDELEKATNNFDSTRIVGHGGHGTVYKGILSDQRVVAIKRSKIVEQTEVDQFVNEVAILSQVIHRNVVKLYGCCLESECLLTWGDRIRIARGCKGYLLSPLCCLNTIFHRDVKSGNILLDDNFITKVSDFGASRSVSIDETHVVTIVQGTFGYLDPEYYHTGKLNEKSDVYSFGVILIELLTRKKPIFLSSMGDKQNLCHHFLQRQEHKTTVEIVDPKQTYEKFMRWPHLLRYA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.012393 | 0 | 0.0279465 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g26210 | SBH | 0.000000 | 0.320759 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026140 | SBH | 0.074024 | 0.000000 | 0.411168 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0026260 | SBH | 0.084580 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019990 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0016340 | SBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0016380 | SBH | 2.479559 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0016550 | RBH | 0.108600 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0441100 | SBH | 0.9225525 | 0.1917245 | 1.911297 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0016350 | SBH | 0.070616 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0016600 | SBH | 1.865435 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025880 | SBH | 0.075280 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0016240 | SBH | 0.030456 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026100 | SBH | 0.034894 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0016440 | SBH | 0.280651 | 0.0 | 0.518803 |
