Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_01G0216200 OGI:01039090 | 3/16 Minghui 63 | MH63RS3 | HZAU Chr01:13364616-13367904
Gene Symbol -
DNA seq

TTAAATACCTGAATGTTGAACATTTTGGTCATCACTCTCAGCAAGATCACGTGCAAAGAAATCACCCAAACCTTCTGCCCTCATCCAATCTTGAAGGCAAATCAATGCCTCTACAGTACTGCTCGAAAGTCTACTTCTATAGTCACTAATGATCCTTTCTCCAATTGAAAATGCTGCCTCTGATGCCACTGATGTTGCTGGAATAGCCAAAACATCACGTGCCATTCGTGAAATCACAGGGTACTTTGTTTTGTTTACCATCCACCAGTTCAAGATATCAAAATCATGCCCATCTTGGAAATCACCTTCCTGAGGCATATCAACAAGATATCGACTAAGCTCACTCTTTACTTTGCTCCTGCTTTTGTCATGTAGAAACTGTCTCCAATCAGCGAATTGATTACTTGCATCAACATTCTGCTCAACACTTGTGCTCAACACTTGTTTCGGGCTGAGAATTGATGTTGTTTGAGCCCCCATACTTGGCAGAATATTCATCAAACAATTTCTGCATATTACTCTTGATTTCCTTAAGGTAAGGAGTTGCAACAGCTCCAAATGCAGACTTCAAACGGAACTCAATGAACTTGTACTTATACCTTGGATAAAAAATAACCGGGAAACATATTTGCAAGTATTGAGCGTCCCAGTACTTCTTAAATTTTTCTTTCATTTCCTTGACAATAGATGCAATGGTGACATCTTCATTTGTAGCCTCCTTGTCCAAAACCATCTTTATCTTCCAAAGTTCATAAAAATAGCATGTTGAAGTTGGGTACAACATACCAGATACTGCAACAGTAGCTTCATAGAAAACTTTCAACAAAGCACAAAGCTTCTCAGCCATTGTCCATTGATAATCGAAGGGTTGATGCAAATAATTTATGTCATGCCGATCCAAGGCTTCAAAGGCCATTCTGACCAATAAAGATGAATCGAGCATTAAGTATGTCGAATTCCATCTCGTTGATACATCAAGCAATGGTCGTCTGTTAGTTTTTATTCCCACTTGAGCAATCATCTCTTCAAACCTTTGACCACGTGATTGCGAACTCCGAACATATTTAACACTTTCTCTTATACTGTTAATGGCATTGCTCATGGTTTTTAGCCCATCTTGGACAATTAGATTGAATATATGGGCAGCACAGCGGAAATGCAACAACACTCCATCACAAGGCAACATTGTTTTACCAACAAGATTGGTTTTCAGATTAGTCATCATTGTATCATTCACACTTGCATTGTCTAAGGTAATAACTTATTTTCGATATGCCACTCCTGAATGGCCTTTAGCATTTCACTAAACATAGTGATGCCATCATGTGGGGTCGGCACTAGAGCAAACTTTATAATTCTCTTTTGCAACTTCCATTCATTATCAATGTAATGACAGGTAACACACAAATAGCCTAAGTTCTGGATGGAAGTCCACATGTCGGCAGTAAGAGATACTCGAGAATTTGAGCTCTTCAAGACATCAAATAAAGCTAACTTTGATAGCACCTTAAAATATGGATTTAAACTTGCAACAAATCTCCTAAATCCAACATGCTCAACAATGATAAAGGGTAACTCTTGCAACACAATCATCCTAAGAAGTTCTTTCCGTGACACTTCTTGGTCAAATTTCCAATTCTTCATAACATCAGCGGTAGGGGACAAGTTGGCATGCATATGCTCAATCAAATGGTGCATTCTAAGCCTGACCTTACAAACTTTCAAATGTCTAAGGCACTGACTAGTCCCAGAAGATCGGCTAGCCACGAAAACCTTATTGCAGTGGATACATTTAGCATGTGATAGTTTATCATTAGTACGTATTGGATCAAATTCTTTCCACATTGTAGATTTCAGTTTTCTTGCTCTCCCTATGGCTAAGCACAAAAATATTGCTATAAATACACTAGTGACAAGTAAAGTAAAAATACTGCACTGACAAGTATTATACGAATATTATAAGTATACTAGCGACATTTCGACAAGTACTCTATGTTCAGTTTATACATATTATGCAATTGCAGTACATGCACACAATCAATTAATATAAATTAATTCATAGACATGAATAGATTACTGTAACAATCAATTAATGGCTATTGCATACATATTATATAACTGCAGTACATGCATGCAATCAATTAATGTAAAAATAATAATTCATAGACATGGATAGATAACGACAAAAATCAGAACAAATAATTTCAAAGAAAAGTCAGCAAGTTCTTACCGTGACTCCCACAGGGAGTCGCTCTTGTCTGATTTGTCATATCGATATCATTAGAAGTTGGGGCTGGTGATGGAGTTCTTTGCCTTGAAGAATTGATAATTGCCATTGAAGATCTAACAGATGGAGAGCTCACTTGGGACATCATGTGTCTCACCCCTGGGGACCTTACTAATGGCAAAATAGGTGACCGTGGTCGCTTGGCTGAAGGAGGATCTAAAGAAGACTTCCGCTTTGCCCCTAAAAGGGCTGCCTCTTCAGTAGCTTCAAACGATGATGGGGTCGACATGGAAGAAAATTTGTGCTGAAAAGAGCAAAATTGTGAGCATAGTAAAATTGTGAGCACTTATGAAAAGAGTAAAATTGCGAGCATTTGTGAACTATATAGCACTTCAAAAATCAAAACAAATAGACTACATATCATGAAGGGCAAATAATAAAAAGAATGCGTATCACTCTACTATCAGCACATGTGCCTGATTGGTCCTCTATTAGAACAGTACTCTGATAGTCTGATTGGGCCAACAGTTGTGTAAGTGTTCTGTTTATTTCACCAAGATGAAATTCTGAAAAACTAATGCAGATGCAGGGAAAACATGAAAAAATAATTATCCAGTGTAACATCTAGGGTGAATATTACTACTACATGTAACTGTACTTTATATACTATAGAACAAGAAAAAAAACCTGAAGCTAATAATTAAGAAATTAGTCTGAAGGAAACTTCTCTGAATGATCACCTATCAATCTTGTTATGTCAAACCAGTGGTAGCTGATCATGCACCACATTAATTAGATAAAAAAAGATGCAATAGATCATTTGCAGACGCTGATGTCCAGTATAACAATGGCTAGATCACCAATCACACTCAAAGTTTAACATATACAAAAACAAATAGAGTGAGTGAGACAACCTGCTGCCATTCATGGAGAAGCAATTCGTTGATTCACATAAATACAATCAAGCATTCCGGAGAAATCGCCAATCTCCCATGGCCACCGGTGACTCATTAGCTCCGCCCTGTCGCCTCCCCACTCGAGAGAAATTTGACATTGTGCCAT

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CDS seq

ATGGCACAATGTCAAATTTCTCTCGAGTGGGGAGGCGACAGGGCGGAGCTAATGAGTCACCGGTGGCCATGGGAGATTGGCGATTTCTCCGGAATGCTTGATTGTATTTATCACAAATTTTCTTCCATGTCGACCCCATCATCGTTTGAAGCTACTGAAGAGGCAGCCCTTTTAGGGGCAAAGCGGAAGTCTTCTTTAGATCCTCCTTCAGCCAAGCGACCACGGTCACCTATTTTGCCATTAGTAAGGTCCCCAGGGGTGAGACACATGATGTCCCAAGTGAGCTCTCCATCTGTTAGATCTTCAATGGCAATTATCAATTCTTCAAGGCAAAGAACTCCATCACCAGCCCCAACTTCTAATGATATCGATATGACAAATCAGACAAGAGCGACTCCCTGTGGGAGTCACGCTTTATTTGATGTCTTGAAGAGCTCAAATTCTCGAGTATCTCTTACTGCCGACATGTGGACTTCCATCCAGAACTTAGGCTATTTGTGTGTTACCTGTCATTACATTGATAATGAATGGAAGTTGCAAAAGAGAATTATAAAGTTTGCTCTAGTGCCGACCCCACATGATGGCATCACTATGTTTAACAATGCAAGTGTGAATGATACAATGATGACTAATCTGAAAACCAATCTTGTTGGTAAAACAATGTTGCCTTGTGATGGAGTGTTGTTGCATTTCCGCTGTGCTGCCCATATATTCAATCTAATTGTCCAAGATGGGCTAAAAACCATGAGCAATGCCATTAACAGTATAAGAGAAAGTGTTAAATATGTTCGGAGTTCGCAATCACGTGGTCAAAGGTTTGAAGAGATGATTGCTCAAGTGGGAATAAAAACTAACAGACGACCATTGCTTGATGTATCAACGAGATGGAATTCGACATACTTAATGCTCGATTCATCTTTATTGGTCAGAATGGCCTTTGAAGCCTTGGATCGGCATGACATAAATTATTTGCATCAACCCTTCGATTATCAATGGACAATGGCTGAGAAGCTTTGTGCTTTGTTGAAAGTTTTCTATGAAGCTACTGTTGCAGTATCTGGTATGTTGTACCCAACTTCAACATGCTATTTTTATGAACTTTGGAAGATAAAGATGGTTTTGGACAAGGAGGCTACAAATGAAGATGTCACCATTGCATCTATTGTCAAGGAAATGAAAGAAAAATTTAAGAAGTACTGGGACGCTCAATACTTGCAAATATGTTTCCCGGTTATTTTTTATCCAAGGTATAAGTACAAGTTCATTGAGTTCCGTTTGAAGTCTGCATTTGGAGCTGTTGCAACTCCTTACCTTAAGGAAATCAAGAGTAATATGCAGAAATTGTTTGATGAATATTCTGCCAAGAGCAAAGTAAAGAGTGAGCTTAGTCGATATCTTGTTGATATGCCTCAGGAAGGTGATTTCCAAGATGGGCATGATTTTGATATCTTGAACTGGTGGATGGTAAACAAAACAAAGTACCCTGTGATTTCACGAATGGCACGTGATGTTTTGGCTATTCCAGCAACATCAGTGGCATCAGAGGCAGCATTTTCAATTGGAGAAAGGATCATTAGTGACTATAGAAGTAGACTTTCGAGCAGTACTGTAGAGGCATTGATTTGCCTTCAAGATTGGATGAGGGCAGAAGGTTTGGGTGATTTCTTTGCACGTGATCTTGCTGAGAGTGATGACCAAAATGTTCAACATTCAGGTATTTAA

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Protein seq

MAQCQISLEWGGDRAELMSHRWPWEIGDFSGMLDCIYHKFSSMSTPSSFEATEEAALLGAKRKSSLDPPSAKRPRSPILPLVRSPGVRHMMSQVSSPSVRSSMAIINSSRQRTPSPAPTSNDIDMTNQTRATPCGSHALFDVLKSSNSRVSLTADMWTSIQNLGYLCVTCHYIDNEWKLQKRIIKFALVPTPHDGITMFNNASVNDTMMTNLKTNLVGKTMLPCDGVLLHFRCAAHIFNLIVQDGLKTMSNAINSIRESVKYVRSSQSRGQRFEEMIAQVGIKTNRRPLLDVSTRWNSTYLMLDSSLLVRMAFEALDRHDINYLHQPFDYQWTMAEKLCALLKVFYEATVAVSGMLYPTSTCYFYELWKIKMVLDKEATNEDVTIASIVKEMKEKFKKYWDAQYLQICFPVIFYPRYKYKFIEFRLKSAFGAVATPYLKEIKSNMQKLFDEYSAKSKVKSELSRYLVDMPQEGDFQDGHDFDILNWWMVNKTKYPVISRMARDVLAIPATSVASEAAFSIGERIISDYRSRLSSSTVEALICLQDWMRAEGLGDFFARDLAESDDQNVQHSGI

Function Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot:Q6AVI0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_01G0216200 OsMH63_01T0216200.1 Chr01 13364616 13367904 - maker
CDS seq

ATGGCACAATGTCAAATTTCTCTCGAGTGGGGAGGCGACAGGGCGGAGCTAATGAGTCACCGGTGGCCATGGGAGATTGGCGATTTCTCCGGAATGCTTGATTGTATTTATCACAAATTTTCTTCCATGTCGACCCCATCATCGTTTGAAGCTACTGAAGAGGCAGCCCTTTTAGGGGCAAAGCGGAAGTCTTCTTTAGATCCTCCTTCAGCCAAGCGACCACGGTCACCTATTTTGCCATTAGTAAGGTCCCCAGGGGTGAGACACATGATGTCCCAAGTGAGCTCTCCATCTGTTAGATCTTCAATGGCAATTATCAATTCTTCAAGGCAAAGAACTCCATCACCAGCCCCAACTTCTAATGATATCGATATGACAAATCAGACAAGAGCGACTCCCTGTGGGAGTCACGCTTTATTTGATGTCTTGAAGAGCTCAAATTCTCGAGTATCTCTTACTGCCGACATGTGGACTTCCATCCAGAACTTAGGCTATTTGTGTGTTACCTGTCATTACATTGATAATGAATGGAAGTTGCAAAAGAGAATTATAAAGTTTGCTCTAGTGCCGACCCCACATGATGGCATCACTATGTTTAACAATGCAAGTGTGAATGATACAATGATGACTAATCTGAAAACCAATCTTGTTGGTAAAACAATGTTGCCTTGTGATGGAGTGTTGTTGCATTTCCGCTGTGCTGCCCATATATTCAATCTAATTGTCCAAGATGGGCTAAAAACCATGAGCAATGCCATTAACAGTATAAGAGAAAGTGTTAAATATGTTCGGAGTTCGCAATCACGTGGTCAAAGGTTTGAAGAGATGATTGCTCAAGTGGGAATAAAAACTAACAGACGACCATTGCTTGATGTATCAACGAGATGGAATTCGACATACTTAATGCTCGATTCATCTTTATTGGTCAGAATGGCCTTTGAAGCCTTGGATCGGCATGACATAAATTATTTGCATCAACCCTTCGATTATCAATGGACAATGGCTGAGAAGCTTTGTGCTTTGTTGAAAGTTTTCTATGAAGCTACTGTTGCAGTATCTGGTATGTTGTACCCAACTTCAACATGCTATTTTTATGAACTTTGGAAGATAAAGATGGTTTTGGACAAGGAGGCTACAAATGAAGATGTCACCATTGCATCTATTGTCAAGGAAATGAAAGAAAAATTTAAGAAGTACTGGGACGCTCAATACTTGCAAATATGTTTCCCGGTTATTTTTTATCCAAGGTATAAGTACAAGTTCATTGAGTTCCGTTTGAAGTCTGCATTTGGAGCTGTTGCAACTCCTTACCTTAAGGAAATCAAGAGTAATATGCAGAAATTGTTTGATGAATATTCTGCCAAGAGCAAAGTAAAGAGTGAGCTTAGTCGATATCTTGTTGATATGCCTCAGGAAGGTGATTTCCAAGATGGGCATGATTTTGATATCTTGAACTGGTGGATGGTAAACAAAACAAAGTACCCTGTGATTTCACGAATGGCACGTGATGTTTTGGCTATTCCAGCAACATCAGTGGCATCAGAGGCAGCATTTTCAATTGGAGAAAGGATCATTAGTGACTATAGAAGTAGACTTTCGAGCAGTACTGTAGAGGCATTGATTTGCCTTCAAGATTGGATGAGGGCAGAAGGTTTGGGTGATTTCTTTGCACGTGATCTTGCTGAGAGTGATGACCAAAATGTTCAACATTCAGGTATTTAA

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Protein seq

MAQCQISLEWGGDRAELMSHRWPWEIGDFSGMLDCIYHKFSSMSTPSSFEATEEAALLGAKRKSSLDPPSAKRPRSPILPLVRSPGVRHMMSQVSSPSVRSSMAIINSSRQRTPSPAPTSNDIDMTNQTRATPCGSHALFDVLKSSNSRVSLTADMWTSIQNLGYLCVTCHYIDNEWKLQKRIIKFALVPTPHDGITMFNNASVNDTMMTNLKTNLVGKTMLPCDGVLLHFRCAAHIFNLIVQDGLKTMSNAINSIRESVKYVRSSQSRGQRFEEMIAQVGIKTNRRPLLDVSTRWNSTYLMLDSSLLVRMAFEALDRHDINYLHQPFDYQWTMAEKLCALLKVFYEATVAVSGMLYPTSTCYFYELWKIKMVLDKEATNEDVTIASIVKEMKEKFKKYWDAQYLQICFPVIFYPRYKYKFIEFRLKSAFGAVATPYLKEIKSNMQKLFDEYSAKSKVKSELSRYLVDMPQEGDFQDGHDFDILNWWMVNKTKYPVISRMARDVLAIPATSVASEAAFSIGERIISDYRSRLSSSTVEALICLQDWMRAEGLGDFFARDLAESDDQNVQHSGI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0111400 RBH 0.922336 0.672252 1.477524
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g23410 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0111400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0000880 RBH 0.173710 1.870566 0.685708
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0000880 RBH 0.788762 3.453163 0.475671
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0000870 RBH 3.335243 2.892036 3.313047
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0000860 RBH 0.155127 0.245903 0.500188
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0212500 RBH 0 0 0.0048095
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0000910 RBH 0.346050 5.894956 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0000880 RBH 0.625137 0.186579 0.359247
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0000860 RBH 0.184398 4.681217 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G000870 RBH 0.305729 1.735541 0.641294
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0000830 RBH 1.112452 7.723816 3.167970
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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