Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0213600 | OGI:01038510 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:13208931-13209641 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GACTCCATTCTAAGGTCATACAACTTTTCGGTGCTTTCTGTCTTGCCAATCTATTCGAAGCTCATCAAAGCAGGACTCAGAATTTGGCTCTACAGGTGTGTTTCCTCTTCCTGTACCTTTAGACCATTTTCCTGTTCCAAATACATGCAGACATGAACATTTTCATCACCTATCCAAGCAAGCATATTTTCCCCTGATAACACTTCTTAAAACTTATCAGAAATATAACGCTGCTTCTATCTGAATTTTAATCCTTCAAAACAGCTGCTAAATAGTGCTGGGAAGTTTAATACGAGTAAGATTGTTTTGCATTTAGTGGAGATGCCGACGGTAGGGTCCCAGTGATCGGGTCAAGGTACTGCGTGGAAGCGCTTGGGCTGCATATCAAGAGGGACTGGCAACCTTGGTACCTGAACAGACAGGTCTGAATTTTTGAACTATCATCAGTGATGTTACATTCTAGTAGCAATGTAGCACTGATGTAGTTAGTCAAGTTAGTTGATGGATGTGAATCTGTATTCTAGTAGCAGTGTAGCACTGATCTGGAAATCACTTGCAATATAGGTTGCAGGAAGATTTGTGGAGTACGATGGCATGACCATGGTGACGATTAGAGGTGCTGGACATTTGGTACCCCTTAATAAACCTGAAGAAGGGCTCACTCTGATTGACACATTTCTTCTTGGTAAACAGCTCTTAACACACCGATGA
More
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| CDS seq | GACTCCATTCTAAGGTCATACAACTTTTCGGTGCTTTCTGTCTTGCCAATCTATTCGAAGCTCATCAAAGCAGGACTCAGAATTTGGCTCTACAGTGGAGATGCCGACGGTAGGGTCCCAGTGATCGGGTCAAGGTACTGCGTGGAAGCGCTTGGGCTGCATATCAAGAGGGACTGGCAACCTTGGTACCTGAACAGACAGGTTGCAGGAAGATTTGTGGAGTACGATGGCATGACCATGGTGACGATTAGAGGTGCTGGACATTTGGTACCCCTTAATAAACCTGAAGAAGGGCTCACTCTGATTGACACATTTCTTCTTGGTAAACAGCTCTTAACACACCGATGA |
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| Protein seq | DSILRSYNFSVLSVLPIYSKLIKAGLRIWLYSGDADGRVPVIGSRYCVEALGLHIKRDWQPWYLNRQVAGRFVEYDGMTMVTIRGAGHLVPLNKPEEGLTLIDTFLLGKQLLTHR |
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| Function | Serine carboxypeptidase-like 26 [UniProtKB/Swiss-Prot:Q5W727] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0213600 | OsMH63_01T0213600.1 | Chr01 | 13208931 | 13209641 | + | maker | ||
| CDS seq | GACTCCATTCTAAGGTCATACAACTTTTCGGTGCTTTCTGTCTTGCCAATCTATTCGAAGCTCATCAAAGCAGGACTCAGAATTTGGCTCTACAGTGGAGATGCCGACGGTAGGGTCCCAGTGATCGGGTCAAGGTACTGCGTGGAAGCGCTTGGGCTGCATATCAAGAGGGACTGGCAACCTTGGTACCTGAACAGACAGGTTGCAGGAAGATTTGTGGAGTACGATGGCATGACCATGGTGACGATTAGAGGTGCTGGACATTTGGTACCCCTTAATAAACCTGAAGAAGGGCTCACTCTGATTGACACATTTCTTCTTGGTAAACAGCTCTTAACACACCGATGA
More
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| Protein seq | DSILRSYNFSVLSVLPIYSKLIKAGLRIWLYSGDADGRVPVIGSRYCVEALGLHIKRDWQPWYLNRQVAGRFVEYDGMTMVTIRGAGHLVPLNKPEEGLTLIDTFLLGKQLLTHR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.075021 | 1.294469 | 0.7818845 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0332500 | RBH | 0.135711 | 0.388676 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g22954 | RBH | 0.083217 | 0.084878 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0332500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0015370 | SBH | 3.694627 | 6.679603 | 0.562870 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0015140 | SBH | 2.978437 | 0.786912 | 1.204707 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0015390 | SBH | 7.854044 | 0.000000 | 0.445357 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0014870 | SBH | 1.616237 | 0.051865 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0014910 | RBH | 0.000000 | 6.114828 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0049900 | RBH | 7.4828025 | 15.849273 | 0.235324 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0014820 | SBH | 3.348946 | 0.142773 | 0.109886 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0054800 | SBH | 2.112542 | 4.6470195 | 2.738751 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0014820 | SBH | 5.226772 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0014730 | SBH | 7.299607 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0014820 | SBH | 52.329361 | 14.082506 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0014930 | SBH | 6.929605 | 0.046164 | 0.594598 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0014640 | SBH | 5.574813 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G015030 | SBH | 4.459290 | 0.376063 | 0.909477 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0014840 | SBH | 17.665483 | 0.0 | 1.107218 |
