Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_Ung0005210 | OGI:99014300 | 1/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | ChrUN-Ctg54:81619-90031 | ||||||||
| Gene Symbol | NAAT4, OsNAAT4, OsNAAT1 | ||||||||||
| DNA seq | ATAGAAAAACCTCTCTTTATTTTTTTTATATTTATTAATGGAGTACAAGTAGAATTTGTACAACTACTTTACACAAGAGAAACTTTAATACTATAGCTAACTACTGGAACTAAATTATCTTATCCCACCTCTTATACACACATAGCTGGCTATAAATTTGAAATTTGTAGCTCACTTTTCATCTCTCCTCTCTTATCTTCCTTATATGTATTGATAACTGGTTTGTAGTTTGTTATTGTATTTGCTCTAACTCTTTGACATTCCGAAATGGGGCTCCACTTTCGCCGACGCACTTATATTGAGCATATTAGCATGTGACTGATGCCTCCGGCAAAAGGACTTGACCCTTTCTAATCCTTGCTTTAGCCTTGGGGGATCCAATGCAAAGGTGATGCGCAACCAGTTTTCCATGCCTAAGGCTCTCCCTGCAGGGAAATTTTTTCAGATATTTACTCCCACCAATGACAAAAATCTTTGCCTAATTTAGAGTCACATTAATCAGGCAATTATAATGCTATCCACTCATCTATCAGAATTTCTTTTAATAAAAAGGAGGAAATTCTCTCGTTCATTAGAGAAACATCTTGACATGATATACGTGTATTGGGCAGTTGGCAAGTGGCAAATACTGCTGGATCGCATCCAGCATCACTGTACCAGAACGATACACCATACAAGTGCATGTACCCACCCAATTCACACTGCTCTCATGCATCAGTATGAGTATGCATCAGTTGGTTCGGCTGGGGAACCAACTAAACCAGCCCAACCCACGTATGAACAGGCTGAATTCAATTGCTGAAATTTTGCCATACATGCGTGCAGAAAAGGATCACATGAGAACGATGAATGGCACTTTGCTAGCACTCGCATAAGTCATCAAACCCTCACACTGACAACTCCTTTTCTTAGTAGTGGAAGAGTCAAAAGAGAGTCCAAGAGAGAGGGGATTAGACGAAAGAGAGAAAATGATGATCGTATTGGAACATTTTTAAATAAAAAAAAATAACTTGCTTGATACAACAAGAAGTGCTACCTAATTCCCACAATGTTGAACGAATGTTGTTTAAAATATCAGCAAAACTTCAGCATTAACAGGTATATGAAATTTAGTGATAACATGAACTAGAGCACTTGTCGGAGTCTAGACATTCAACCATTCAAGCATTGAGGCTTTTGTCTTCCTTCCTCTATCTTTCAAAAAATCCACTTCTGACACAGTTATAATTTTTACTTCACAAATCTGGCCCTTTGTTTGAATTTTGATTCTTGGCTCTTTGGGAAGATCGCCAATAGGGACTTGGACAGAATGGATCACATGAGAAGGATATGATACAAAGGATCTTATGCTATTATTTTCCATAACAATACTAGGAGGAGCACCGTTTGATGCTTCAATTAATAGTGACTAGGACACGGGAATGGGCAAGACCTCAGCCCTCGATGGCAAAGATAACTGATGCTTGCGCAATAAGAGCAGGAACGATTGTTCACCAAGAATAGGACAAGAAAGGTGGAGAATATGTCAATGTGAAGAAATATCTGAAACAAAAACGTGCTAGTTGATAAGACTAGGAAGGTGCTTGGCCAATGGGGTAGGCAGCAAGGCACGTGTATATTTGTGATATATCGCTTATCAGAGTTCGTGTGTACTGTAACAGTGTGACACAGAGAAGTAGAGAACCATAGAGAACAAAACAATTTATATTGTTATACTATTGTTCCTGCTATAAAAAAAAATGTCTGTCCTGATGTTAATAAGAGCACACTGATCAGGTAGGCTCTAGTGTTTTCAACTATCCTCTTCCTTTTTTGTGGCCATCCTTAACGAACAAGGAATGTGCATAACACTATGGTTAAATTGTACCTAACTGGAAATGTTTACAAGTCTTATCGAAGGGCATTTTATACACCCTTAAATTGAATTGCACAGTGTTTTCTAATGTTGTACTACCACTGTATCTATATTGATTTTAGTATCACATAATGTAAAATGTTCAAACCTTTCTAGTGCCTGTGTCTATTCACCTGTCATGCACTATTCTCGATGTTAGTTTTGAACAGATGAAACATTGTCAATGTTGGTCTTTTATTCTATTTATCTAAGGATGTCAAACATGATGGTATTAACGTAAAGAACACTTATACACTTGGTATTATAGAAATTAGGATATGTGAGTTAGGGCGGTCACATGTCAGTTAGGCCTTACAATCAGTTAAAGGGTTGGCTGAGCAATCTAGCACTATATATGGTTTTCAGTGGCACTGTCTGCCATTTTGGCACTAAAAGACATCTCTACACACCAAATGCTGAAAAATAAGCATTAAAAGAACATGTTTCACTACTTTATTGTGTTACCACATACCAGGCAAAAGTACGACAGACTCCTCCTTTACCAACTTGCTGCAGAAATCGATGTCGTCACAAATGTCCGATAATTGTGATATATCAAGTTTTACCTGAAGAACATATGGTCAGCATTAATGCTATAAGAAATATTAATTATTTTTTGTGATTGCCTCACCATCATAAAAAACGACCCCTCAGGTTTGTGAGGACAGGTGATACACTTTATTTCTTTTATTTCACCAAAACATATCTCAGCAGTTTCCTTTAACAACTCGAGAGTCTTTCTGAAGAATTCATCATTTGTGTTCTTCATAATATGAGGAATAGCTCCCTGGTGACGATAATTATATAACATCAATGTTGGGCTATTTTCAATCATTCAGAAAAAAAAAAGAGACATGATCCGCACTACAGTTACAACTGAAAATAAAACAGGAGGGTTCATCCATTGATCATAACAAAATAATGCTCAGAACAGCAATCTGTGGAAGAATACATCATTAAGCTAGCAATTTGCACCAAAAATGTAGTTGTCTTAGAACAAGAAAGGAGAATAGAGAGGGAGTTCTACCTCATCAATTATAAATATGAAACATGATGTGCTGAAGAGATTCCCTACTAATTGATGTAAAAAGGAAGATTAAGTAACTCATTGACAGAATGTCATCAGACCTTTTATTTCTCGAACAATGTCATCACCTCTAGACTAGTCCATATCACTATATTCATAGTTGTGTGTTTGTTGTAATCATATTAAGTGTCAAGTGCTCAGGTATTCACGTTTTACATTATTAATGAATTTGGGTCAATAAAATAGCCAAAACACATATAATATAACACTTTTATAGGATAAGGACTAAAATTTCTTTGTAGTTAAGAGGTCTTTAATATGAACCTGAGACCTCCAAATAACAGAATGCAGAACAGGTACAAAGATAAAAGAAAGAATATAAGGAAAATTGAATCAGAAGATTTGCCATGAGCCCATGACGCAAATCAAGCTTGCTGCATACTTATGTGATAAGGAATTTTTGTTTCCATACCACTGAAATATCACTTTTTTCATATATGCTGCTGATTTTCTAGTGCACACACCACCAAAATTGTCTGATGTTCCCTCTTTTAGCAATACCATCTAGTATCGTTGACTTTTTTACATATTCTCTCTTTTATTTCACCAGAGATACATGACAAATGTCTTTATACCCCAGCAGGCCAACGCGCTTGCCACACTTCTCATTGCATGGTGCGGCACGCTGGCACCCTCATTTCCCGGCACACCACACTGCCCTACCCTGTCATGTGCTTATTGGTCGGTTCATGCGATCTGATTCGGAACCTGTGGGCACATGAAACCTGAAGCTGCCCCTATTCCCCACCCACGCAGGAATGATGTGCTAGTGAAATATGGAGAGATGGATCTCGACCTTGCTTTAGTTAGTTCTGACTCCAATTTGCTTGGTCTGGAGAATAGTCAAGATGCTCCAACAGTATGTACTAATGCTATTTCCAAAACATTGTGATCACTTGGATTACATTTCAAAATTTTGATCACTCTGAGCTAAATCCAACTTGCTGCTGCTTAAAACGAATATTACTAACAGTTACCACTCTTGCTAGCTAATAAGACCAACAGAATAATGAACATGGATGTTGGGGCCAAAGAAGATGGACACGGCGCCATTGCTGCATGCAGCAGCCAGCTGCCAAGAAAACTGAGTGATGCGGAGTTGCAGATAACAGCGATCTGGCGATGACAGTGAAAATGAAGATGCAGGAGGATGCTAGGCAGCATCCATGGCAAAGGCACTGTAACAACGACATATAAATGTCACCTTGCACAAGACTGGATTCACCAGTTAAATCCTCGGTCGAGGAATCCAGAAAATTTGATGCGGGAGAACAGTGATGCAGATGATTTTTAGCCTCTAAGAGTGAGGAGTTTGAGTTCACAGAAAAAAAAGGCAAACATAACGGTAGTTGTAAAACAGGAAATGGTGGACAATTTTGGTGGTATTAAAGTTCACCACAAGATTTTAGTGGTAAATAACAAAGTTCTCATATATCAGTTATAAACCCAATTTTTCAATATAAGAGACAATAGTACAACAACTAAGAGAGCACCTGTCAATCATATCAAGTAATTATGCTAGCTTACAAAAGTAGGAAATATGCACACTACTATAAAAGACACTAGTAGTGGTGGTAGTTCTGCCACCACCACTACTTTTGTGCTTTTACACATTAGTCCCTAATATATTCTGATAGTATACAATAGTCTAATATTTGTTTGACTCAAGTGAATACCATATAAAATAAGAAAACAAGTAATACTAGCATTTGGCATTTTACGGGGAAATAGTAGTATCATATTTGATAAAACTAGTAACATTCCTCTAAGTAGTAACGGGCCAGGCCCATATAAGTACGGATTTGCTAATGCATGCCTAGTCGCGCGCGTCCCCCCCCCCCCCCTCTCCCAACACGCGACGAAGCCACGTGGTGTGCGCGGAGAGGGAGGGGATGCTTTTTTCCCCTTTTTTGGGTTTTTATACATACATATACAAACTTTGTATACATGACCTTTTTTTTTGTTTCTTTTCGTTCTTCTACGTACGTATACAAAGTTTGTACTTTTGTATATGTGTATATATATTTTTATACGTCAAAAATGTATGTGTATACATACAAAAAATTGCTATAGATATATATACAAAGTTTACACATATTTTATCGTATATACACAGATATATATACACTTTATATACATATGTATATATACGTATATGTATAGAATCTAGATGGGGTGGGCTGGGCGATCAGGCGCAGATCAGCGGCCCCCATATAAGTAGGGATGTGCTATATAAGACATTGGATCCAGTGGTTACCTACGCACCCTACGCATGCGAGCGCGGTGTACGCGGTGGGAGGAGAACGACTCCACCTTTAAGGTAATACAGAAAAATATATTTTATCCATGACATATTGTTATATATTTTCTTTTACCCCTATCAAAGCATAAGGGCATTTTGCTAATCTGCCAAAAGTAAGCAAGCTAGCTACCAAGGTACTGATAATTTGATATGAGACTTATGAGTCCATAAAATAACCTGAATAAATGTTGCAGGACCTGTTGTTAGGTTTCGAAAGCTTCTGAGTGAATCGACGACCTAAAAATTGAAAAGGAATGGTGCCTTCAGTTATGTATCAAACATTCAGCAAAGGTATTAGCTAAGCAATCACATAGAAAACTAATTCAAGGAAACAACACAAAAAGCCTCCTTTAAAGTATTTCCATGATACTAAATAGGATGATTCCTCACAGATTATTTGTGTTGATTCCATCTCCACCAGAGCAAATACAAAAACCGTATAAATGATACAGTAAAAAGTCCTTTAAAAAAGACACACGGTAAAAAAATTAATTAACAGGACACATAATCACTAGCATGTTGAATATAGCCTCTTCCAACTCTAAGTTGCTAACTCAAAGCATCTTTATGCCTTTACTCTCAGTATTCAAAATTCTCTTTCAACCCTTCTGAAATTACCTCAACATGATTGGATGAATTATAAGAATTTAGTGATAAATATTTTATTTCCCTACCAGATCTGAAGCATTGGTTATATATCAATAACTAAAGTTCCAATTGCCGGATGAAACAGGTTCTAATAGAGAATTGTGGACTAAAAGAACATGAATAATGAGTAAAATGATACTTCATATGCTACATCTTTCACCCCTTTTTGTTTAACAAATAATGGAAATGTGTTTTACACCTCCAGCCTCTACACACAGCCAACTAGACAATATGAAATTATGAAAGACATAGGGCAGCTCCCTGGTTCTACTAATGTGAAAGAAGATTGACAAGGTTTAAGTTACGTCTCACAAAGGAAATGTGAATTCATTTAAAGTATAAAATACTACTCCCTCTGTCCTAGAATATAACAAGATTTAGAGTTGGACACGGTTATTAACAAAGTAGGTAGAAGTGGGTGGTGAAGGGTTGTGATTGGATGAGTAGTGGAGGTAGGTGGGAAAAGTGAATTGTGGAGGGTTGTGATTGGTTGGGAAGAGAATGTTGGTGGAGAAGTCGTTATATTTTGGGACAAATCCTGAGAGCTAAAAATTGTTATATTTTGGGACGGAGGGAGTACTACGCATCACAAAAAGTAAACAGTGTGCTTAAAAAAATGTACAAATCACCTTTGTTTCTTTCAGAATGCCTTTAGGATCACAAATTGCTATCCATCCAAATCTCCAGCCAGGGACAACCCATCTCTTTGATATAGCTCCCAATGTGAGTACTGGAACAGTCTCTCCAAACACACCCATTGGCACAAAAGGAGTGCTTCCATAAACAAGGTGACCATATACTTCATCAGCAATGACTAACAGACCGAGCTTGCTTGCTGTATCTGCAATCTAAGTTAAGATACGGCACATAAGCTCCATTGAAATTGGAACAAATAAAATGAAGTAAGGTGTTACCCAGCATTGTACAGCCATCATACCAACCTTGGACAGATGCTCATAAGTGTACACATTACCACAAGGGTTATTGGGGTTAGTAATCACTATTGCAACAGTATTCTCATCTGCTAAAGCTTCAACAGCTTCAACATTAATCTCCCATCCTCTCTCTGGAACAAGATCATAGAGCCGCACTTCCATCCTGTGGAACACCGCATGTGCTTCATGTTTTGGGTACCCGGGCTTTGGAAGCAATATATTGGCACCTGGTTGGCCAAAAACAGACATAACAATCTCGATTGCTTGGGTACCTCCAGATGTGAGGAAAATATCATCTGTGCAAAGCTTGTAAGGAAGATCACAGGATAGGTACTCTGCAACAGCTCTGGATTTCAACAGAAAATGGCAACAAAAGCAACACAGAGAATGTTTATTAGTACAAACAAGGATTTTCACTTTTCCATATACTGGTGAAAGACTATCAGCAATTGCTTAATCATGAGACATGCGTGATTAATTTAAATATGTTCCCGCATTCTTTACATGATTTCACATACAGTATTCATCCCCATTCTTTAAATATGTTTGATTAATTTAAGTATGTGTGATTATTATGTTTGAATCGAAGCCATATAGACTGATTAATATGCCAATTTAACTGTTAACGGCAGTGAAGGATTTGATCAAAAAGAATTTAATAAGCTATAAGCAGTTGTTGATATTTGAATAGATAAATTATACTGTTTCAGAATTGACGACAGATTACGGGCCTGTTTAGTTCCCAAACAAAATTTTTCACGCTGTCACATTGAATTCAATGTTTGGACACATGCATGAAGTATTAAATGTAGACAAAAAAAAATAAAACCAATTACATGGTTCGCTAGGAATTTGCGAGACGAATCTTTTAAACCTAATTACGTCATGATTTGACAAGGTGGTGCTATGGTAAACATTTACTAACGACAGATTAATTGGTCTTAATAAATTCGTCTCACAATTTCCTGGCAGAATTTGTAATTTGTTTTGTTATTAGACTACTTTTAATACCTCTCAAATGTGTGTCGATGTGACATAGAGGGGCAAAAATTTTTGCCAACTAAACAAGCCCTACGATAACTTAAAAGATAGGGCAGATTAGTTCTACTCTGAGCGCACAGATAAATCAAGGACGACCCAAGTACAGAACCACCTATAGGGGATTCAGTTAAGGCAAATCCAATCATGAGTGGACAGTGGGCACCGACCGGCGAGCAGGGAGGCTGGTGGCGGGGGAGGAGTAGCCGTTGTAGTCGCCGGAGCGGACGGCGGCGGCGACGGCTTCCTCCGCCTCGGGCGCGGTGCGGAAGCAGGCGGAGGAGGAAGGGTCGCCGTGGCTGAGCGGGATGACGGGCCGTGGCCCGTGCTCGTCCAGGCACGCGTGCAGCTGAAGGAGGTACCGCTGGATGCTGCGTTCCCCGGCCGCGGCCACGGCCAGATTCGGGGTCGCGAAGCGCCATCGCTTCCCCCCGCGGCCGCCCTCCATCGCCGGAGTCACCGGAGTTTGGGGGATGTGGCCAGCCAGGGGTGACACGGAGACGGAGGCT
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| CDS seq | ATGGAGGGCGGCCGCGGGGGGAAGCGATGGCGCTTCGCGACCCCGAATCTGGCCGTGGCCGCGGCCGGGGAACGCAGCATCCAGCGGTACCTCCTTCAGCTGCACGCGTGCCTGGACGAGCACGGGCCACGGCCCGTCATCCCGCTCAGCCACGGCGACCCTTCCTCCTCCGCCTGCTTCCGCACCGCGCCCGAGGCGGAGGAAGCCGTCGCCGCCGCCGTCCGCTCCGGCGACTACAACGGCTACTCCTCCCCCGCCACCAGCCTCCCTGCTCGCCGAGCTGTTGCAGAGTACCTATCCTGTGATCTTCCTTACAAGCTTTGCACAGATGATATTTTCCTCACATCTGGAGGTACCCAAGCAATCGAGATTGTTATGTCTGTTTTTGGCCAACCAGGTGCCAATATATTGCTTCCAAAGCCCGGGTACCCAAAACATGAAGCACATGCGGTGTTCCACAGGATGGAAGTGCGGCTCTATGATCTTGTTCCAGAGAGAGGATGGGAGATTAATGTTGAAGCTGTTGAAGCTTTAGCAGATGAGAATACTGTTGCAATAGTGATTACTAACCCCAATAACCCTTGTGGTAATGTGTACACTTATGAGCATCTGTCCAAGGTTGGTATGATGGCTGTACAATGCTGGGTAACACCTTACTTCATTTTATTTGTTCCAATTTCAATGGAGCTTATGTGCCATACAGCAAGCAAGCTCGGTCTGTTAGTCATTGCTGATGAAGTATATGGTCACCTTGTTTATGGAAGCACTCCTTTTGTGCCAATGGGTGTGTTTGGAGAGACTGTTCCAGTACTCACATTGGGAGCTATATCAAAGAGATGGGTCGTCGATTCACTCAGAAGCTTTCGAAACCTAACAACAGGTCCTGCAACATTTATTCAGGGAGCTATTCCTCATATTATGAAGAACACAAATGATGAATTCTTCAGAAAGACTCTCGAGTTGTTAAAGGAAACTGCTGAGATATGTTTTGGTGAAATAAAAGAAATAAAGTGTATCACCTGTCCTCACAAACCTGAGGGGTCGTTTTTTATGATGGTAAAACTTGATATATCACAATTATCGGACATTTGTGACGACATCGATTTCTGCAGCAAGTTGGTAAAGGAGGAGTCTGTCGTACTTTTGCCTGGGAGAGCCTTAGGCATGGAAAACTGGTTGCGCATCACCTTTGCATTGGATCCCCCAAGGCTAAAGCAAGGATTAGAAAGGGTCAAGTCCTTTTGCCGGAGGCATCAGTCACATGCTAATATGCTCAATATAAGTGCGTCGGCGAAAGTGGAGCCCCATTTCGGAATGTCAAAGAGTTAG
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| Protein seq | MEGGRGGKRWRFATPNLAVAAAGERSIQRYLLQLHACLDEHGPRPVIPLSHGDPSSSACFRTAPEAEEAVAAAVRSGDYNGYSSPATSLPARRAVAEYLSCDLPYKLCTDDIFLTSGGTQAIEIVMSVFGQPGANILLPKPGYPKHEAHAVFHRMEVRLYDLVPERGWEINVEAVEALADENTVAIVITNPNNPCGNVYTYEHLSKVGMMAVQCWVTPYFILFVPISMELMCHTASKLGLLVIADEVYGHLVYGSTPFVPMGVFGETVPVLTLGAISKRWVVDSLRSFRNLTTGPATFIQGAIPHIMKNTNDEFFRKTLELLKETAEICFGEIKEIKCITCPHKPEGSFFMMVKLDISQLSDICDDIDFCSKLVKEESVVLLPGRALGMENWLRITFALDPPRLKQGLERVKSFCRRHQSHANMLNISASAKVEPHFGMSKS |
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| Function | Nicotianamine aminotransferase 1 [UniProtKB/Swiss-Prot:A0A0P0VI36] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_Ung0005210 | OsLima_Ung0005210.01 | ChrUN-Ctg54 | 81855 | 89970 | - | NAM | ||
| CDS seq | ATGGAGGGCGGCCGCGGGGGGAAGCGATGGCGCTTCGCGACCCCGAATCTGGCCGTGGCCGCGGCCGGGGAACGCAGCATCCAGCGGTACCTCCTTCAGCTGCACGCGTGCCTGGACGAGCACGGGCCACGGCCCGTCATCCCGCTCAGCCACGGCGACCCTTCCTCCTCCGCCTGCTTCCGCACCGCGCCCGAGGCGGAGGAAGCCGTCGCCGCCGCCGTCCGCTCCGGCGACTACAACGGCTACTCCTCCCCCGCCACCAGCCTCCCTGCTCGCCGAGCTGTTGCAGAGTACCTATCCTGTGATCTTCCTTACAAGCTTTGCACAGATGATATTTTCCTCACATCTGGAGGTACCCAAGCAATCGAGATTGTTATGTCTGTTTTTGGCCAACCAGGTGCCAATATATTGCTTCCAAAGCCCGGGTACCCAAAACATGAAGCACATGCGGTGTTCCACAGGATGGAAGTGCGGCTCTATGATCTTGTTCCAGAGAGAGGATGGGAGATTAATGTTGAAGCTGTTGAAGCTTTAGCAGATGAGAATACTGTTGCAATAGTGATTACTAACCCCAATAACCCTTGTGGTAATGTGTACACTTATGAGCATCTGTCCAAGGTTGGTATGATGGCTGTACAATGCTGGGTAACACCTTACTTCATTTTATTTGTTCCAATTTCAATGGAGCTTATGTGCCATACAGCAAGCAAGCTCGGTCTGTTAGTCATTGCTGATGAAGTATATGGTCACCTTGTTTATGGAAGCACTCCTTTTGTGCCAATGGGTGTGTTTGGAGAGACTGTTCCAGTACTCACATTGGGAGCTATATCAAAGAGATGGGTCGTCGATTCACTCAGAAGCTTTCGAAACCTAACAACAGGTCCTGCAACATTTATTCAGGGAGCTATTCCTCATATTATGAAGAACACAAATGATGAATTCTTCAGAAAGACTCTCGAGTTGTTAAAGGAAACTGCTGAGATATGTTTTGGTGAAATAAAAGAAATAAAGTGTATCACCTGTCCTCACAAACCTGAGGGGTCGTTTTTTATGATGGTAAAACTTGATATATCACAATTATCGGACATTTGTGACGACATCGATTTCTGCAGCAAGTTGGTAAAGGAGGAGTCTGTCGTACTTTTGCCTGGGAGAGCCTTAGGCATGGAAAACTGGTTGCGCATCACCTTTGCATTGGATCCCCCAAGGCTAAAGCAAGGATTAGAAAGGGTCAAGTCCTTTTGCCGGAGGCATCAGTCACATGCTAATATGCTCAATATAAGTGCGTCGGCGAAAGTGGAGCCCCATTTCGGAATGTCAAAGAGTTAG
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| Protein seq | MEGGRGGKRWRFATPNLAVAAAGERSIQRYLLQLHACLDEHGPRPVIPLSHGDPSSSACFRTAPEAEEAVAAAVRSGDYNGYSSPATSLPARRAVAEYLSCDLPYKLCTDDIFLTSGGTQAIEIVMSVFGQPGANILLPKPGYPKHEAHAVFHRMEVRLYDLVPERGWEINVEAVEALADENTVAIVITNPNNPCGNVYTYEHLSKVGMMAVQCWVTPYFILFVPISMELMCHTASKLGLLVIADEVYGHLVYGSTPFVPMGVFGETVPVLTLGAISKRWVVDSLRSFRNLTTGPATFIQGAIPHIMKNTNDEFFRKTLELLKETAEICFGEIKEIKCITCPHKPEGSFFMMVKLDISQLSDICDDIDFCSKLVKEESVVLLPGRALGMENWLRITFALDPPRLKQGLERVKSFCRRHQSHANMLNISASAKVEPHFGMSKS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_Ung0005210 | OsLima_Ung0005210.02 | ChrUN-Ctg54 | 81619 | 90031 | - | IsoSeq | ||
| CDS seq | AGCCTCCGTCTCCGTGTCACCCCTGGCTGGCCACATCCCCCAAACTCCGGTGACTCCGGCGATGGAGGGCGGCCGCGGGGGGAAGCGATGGCGCTTCGCGACCCCGAATCTGGCCGTGGCCGCGGCCGGGGAACGCAGCATCCAGCGGTACCTCCTTCAGCTGCACGCGTGCCTGGACGAGCACGGGCCACGGCCCGTCATCCCGCTCAGCCACGGCGACCCTTCCTCCTCCGCCTGCTTCCGCACCGCGCCCGAGGCGGAGGAAGCCGTCGCCGCCGCCGTCCGCTCCGGCGACTACAACGGCTACTCCTCCCCCGCCACCAGCCTCCCTGCTCGCCGAGCTGTTGCAGAGTACCTATC
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| Protein seq | SLRLRVTPGWPHPPNSGDSGDGGRPRGEAMALRDPESGRGRGRGTQHPAVPPSAARVPGRARATARHPAQPRRPFLLRLLPHRARGGGSRRRRRPLRRLQRLLLPRHQPPCSPSCCRVPI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | ChrUN-Ctg54 | 87138 | 88248 | - | OsLima_Ung0005210.02 | OsLima_Ung0005210.01,OsLima_Ung0005210.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0345200 | SBH | 0.494237 | 0.175076 | 1.319651 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g23684 | SBH | 0.332272 | 0.117064 | 0.337729 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0345200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0016230 | SBH | 0.471989 | 0.000000 | 1.179145 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0016030 | SBH | 0.000000 | 0.522028 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0016170 | SBH | 0.000000 | 2.571212 | 0.872206 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0016190 | SBH | 0.000000 | 0.099674 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0016310 | SBH | 1.172706 | 2.304199 | 0.492875 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0264000 | SBH | 2.749538 | 11.0346505 | 32.722286 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0015800 | SBH | 0.0 | 0.0 | 0.175219 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0242000 | SBH | 10.08544 | 12.4498995 | 7.4306425 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0016170 | RBH | 0.317961 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0016140 | SBH | 0.509125 | 1.269086 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0015830 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0016500 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0015950 | SBH | 0.176058 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G015930 | SBH | 0.127981 | 0.654442 | 0.267256 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0016140 | SBH | 0.305518 | 5.197320 | 1.301100 |
