Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_Ung0002620 | OGI:99008690 | 1/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | ChrUN-Ctg38:96197-99167 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGATTTGATGAAGAGTAATCCGCTTCAGGGGAGCCCATGGAGCTTGTTGAACTTGCTGGTATTGATCATTGTCGCCGCCATGATCTGCGGCGAGCTATGTCGTCGTCGTCGTCGTCGTCGTGGCGACGAGAATGGTGGCGCCACGAGGCTGCCTCCGGGGCCATGGCGGCTGCCGTTCGTCGGCAGCCTGCACCACCTCGCGGTGATGAGGCCGCGCGGGGTGGTGGTGCACCGCGCGCTGGCCGAGCTGGCGCGGCGGCACGACGCCCCCGTCATGTACCTCCGCCTCGGCGAGCTCCCCGTCGTGGTGGCGTCGTCGCCGGAGGCCGCGCGCGAGGTCCTCAAGACGCACGACGCGGCGTTCGCCACCCGCGCCATGAGCGTCACGGTGAGGGAGTCCATCGGCGACAAGGTCGGCATCCTCTTCTCCCCCTACGGCAAGAAGTGGCGCCAGCTCCGCGGCATCTGCACCCTCGAGCTGCTCAGCGTGAAGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTCGACGCCATCGCCGCCGCCGCGGCGTCGTCCACGGCGGAGGCGGCGGCGGTGAACATCAGCAGGCAGATCACCGGGCCGATGACGGACCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATCAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTGCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCTCACCATGGCAACCGTCAAAGCTGTCATTCTTGTAAGTATCTACACTACACTAGCTACTACCTCCATCAATTTTTATAGGACTTGCTTTATTTTGAAAAAATCATCGATACTTTTATTAATAGACGTGAAGCTATATTATTTTGTATGTAGTGCCTATATTTCAGGCGCCTAAAATTTCTTAAAAAATTGTTACTTTTTCATCCCTAAGATAAACAATCCAATGGTTCTCATCACTTATCTATCACTATTTCCATCCCATAATATAGTAAATAGTACCATATGACAAAACATATTCCGGTACCTCGAATCTGAATAACTCATGTCTAAATTTGTAGTCCTAAAATATCTCATGCAGTACTAGCTAGGTTACTATGGTATAGGATGGAGGGAGTATTTATTACTTATAATTCTCCCATGGTTGGTTAATAAATTATTCTAACAAAAACTTTACAATATTACATCAAACCAACTTATAACTCATTAAAATTTACAAAATTGCATGCAAAAAAATTCAGAAAAAGACGCAAATAAAGTAAAATTAATCATGTGTAACTCCAAAATTGTAGTTAAGATGAACTTAAATTCCATATTGAATAAGGCTTAGTAATATGAAATTTTAGGTTACCGAAAATATACAAATTTTTTTAGGCATCTAAAATCTAGCAAATCTCTATTTAATTTCTAAGAGTCGTTTGCAATATGAATCTATTGGTACACTAAATATACTTGCAATTTGACAAAATTATTGACAACATAAAGTGGCAAGTATAGATTTGTGTCTTGAAAAGAATTTCATAATCTCCAAAGATTTATTAGATTTCATAAAATTATCTAATATATAAAATTATGGTCAAAGTCACACTTTAAATACCGTGGAAAAAACTCCAATGTCAAGTATCTTTTATCAGAGGGAGTATATATTTATGTATATATGGCTTCCCGCCTTGTGCTTTCCTTCCTATCCTCCATCAACAAAATGTATAAATTTTATGTAGCACTGTAAATATGCATGTTTCCTTTTAACATGCACTAACATATGCATGACATGCATTGGCCAGGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTATCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACGTAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCATACCATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTTACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCCATATGGGACTTGAAACAATATGATGAATACACGCGTGTTGTCATGGAAAATGTTGATAATAGCCGAATGGTGTATGTACCTAGTAGAAAAAAAATACTTTCTGCAAATTATAGTACCTATACTTACAAGATGTTTGGGAGGTAGGAACTCCTGAGATATTCAGATATTCCAGAGCTCCGAGTGCATTAGTATAGAAATTCATGCACGAACACAATATATAAGGCGTTGCTGTCATGTACAAGAGCTGTGTTTTTTAAAGATAAAAGTACTGTACGTTTCCAGTTGTAATGTAACAAAAGTTTGCAAGATATATGCACCTTTTGAAAAATTGAAAC
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| CDS seq | ATGGATTTGATGAAGAGTAATCCGCTTCAGGGGAGCCCATGGAGCTTGTTGAACTTGCTGGTATTGATCATTGTCGCCGCCATGATCTGCGGCGAGCTATGTCGTCGTCGTCGTCGTCGTCGTGGCGACGAGAATGGTGGCGCCACGAGGCTGCCTCCGGGGCCATGGCGGCTGCCGTTCGTCGGCAGCCTGCACCACCTCGCGGTGATGAGGCCGCGCGGGGTGGTGGTGCACCGCGCGCTGGCCGAGCTGGCGCGGCGGCACGACGCCCCCGTCATGTACCTCCGCCTCGGCGAGCTCCCCGTCGTGGTGGCGTCGTCGCCGGAGGCCGCGCGCGAGGTCCTCAAGACGCACGACGCGGCGTTCGCCACCCGCGCCATGAGCGTCACGGTGAGGGAGTCCATCGGCGACAAGGTCGGCATCCTCTTCTCCCCCTACGGCAAGAAGTGGCGCCAGCTCCGCGGCATCTGCACCCTCGAGCTGCTCAGCGTGAAGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTCGACGCCATCGCCGCCGCCGCGGCGTCGTCCACGGCGGAGGCGGCGGCGGTGAACATCAGCAGGCAGATCACCGGGCCGATGACGGACCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATCAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTGCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCTCACCATGGCAACCGTCAAAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTATCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACGTAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCATACCATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTTACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCCATATGGGACTTGAAACAATATGA
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| Protein seq | MDLMKSNPLQGSPWSLLNLLVLIIVAAMICGELCRRRRRRRGDENGGATRLPPGPWRLPFVGSLHHLAVMRPRGVVVHRALAELARRHDAPVMYLRLGELPVVVASSPEAAREVLKTHDAAFATRAMSVTVRESIGDKVGILFSPYGKKWRQLRGICTLELLSVKRVRSFRPIREEQVARLVDAIAAAAASSTAEAAAVNISRQITGPMTDLALRAIMGECFRWREEFLETLAEALKKTTGLGVADMFPSSRLLRAVGSTVRDVKLLNAKLFELVECAIEQHREQIRAAHDNGGDDDDAHGHGDKECLLNTLMRIQKEGDDLDDTLTMATVKAVILDMFAGGSESTSTTLEWALSELVRNPHVMQKAQAEIRHALQGRTRVTEDDLINLKYPKNVIKETLRLHPVAPLLVPKECQESCKILGYDVPKGTIMFVNAWAIGRDPRYWNDAEVFMPERFEKVAVDFRGTNFEFIPFGAGRRMCPGITFANATIEMALTALLYHFDWHLPPGVTPDGLDMEEEFGMSVSRKRDLYLRPTLHMGLETI |
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| Function | Cytochrome P450 71D7 [UniProtKB/Swiss-Prot:P93531] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_Ung0002620 | OsLima_Ung0002620.01 | ChrUN-Ctg38 | 96197 | 99167 | + | NAM | ||
| CDS seq | ATGGATTTGATGAAGAGTAATCCGCTTCAGGGGAGCCCATGGAGCTTGTTGAACTTGCTGGTATTGATCATTGTCGCCGCCATGATCTGCGGCGAGCTATGTCGTCGTCGTCGTCGTCGTCGTGGCGACGAGAATGGTGGCGCCACGAGGCTGCCTCCGGGGCCATGGCGGCTGCCGTTCGTCGGCAGCCTGCACCACCTCGCGGTGATGAGGCCGCGCGGGGTGGTGGTGCACCGCGCGCTGGCCGAGCTGGCGCGGCGGCACGACGCCCCCGTCATGTACCTCCGCCTCGGCGAGCTCCCCGTCGTGGTGGCGTCGTCGCCGGAGGCCGCGCGCGAGGTCCTCAAGACGCACGACGCGGCGTTCGCCACCCGCGCCATGAGCGTCACGGTGAGGGAGTCCATCGGCGACAAGGTCGGCATCCTCTTCTCCCCCTACGGCAAGAAGTGGCGCCAGCTCCGCGGCATCTGCACCCTCGAGCTGCTCAGCGTGAAGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTCGACGCCATCGCCGCCGCCGCGGCGTCGTCCACGGCGGAGGCGGCGGCGGTGAACATCAGCAGGCAGATCACCGGGCCGATGACGGACCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATCAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTGCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCTCACCATGGCAACCGTCAAAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTATCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACGTAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCATACCATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTTACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCCATATGGGACTTGAAACAATATGA
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| Protein seq | MDLMKSNPLQGSPWSLLNLLVLIIVAAMICGELCRRRRRRRGDENGGATRLPPGPWRLPFVGSLHHLAVMRPRGVVVHRALAELARRHDAPVMYLRLGELPVVVASSPEAAREVLKTHDAAFATRAMSVTVRESIGDKVGILFSPYGKKWRQLRGICTLELLSVKRVRSFRPIREEQVARLVDAIAAAAASSTAEAAAVNISRQITGPMTDLALRAIMGECFRWREEFLETLAEALKKTTGLGVADMFPSSRLLRAVGSTVRDVKLLNAKLFELVECAIEQHREQIRAAHDNGGDDDDAHGHGDKECLLNTLMRIQKEGDDLDDTLTMATVKAVILDMFAGGSESTSTTLEWALSELVRNPHVMQKAQAEIRHALQGRTRVTEDDLINLKYPKNVIKETLRLHPVAPLLVPKECQESCKILGYDVPKGTIMFVNAWAIGRDPRYWNDAEVFMPERFEKVAVDFRGTNFEFIPFGAGRRMCPGITFANATIEMALTALLYHFDWHLPPGVTPDGLDMEEEFGMSVSRKRDLYLRPTLHMGLETI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0642500 | SBH | 0.114891 | 0.072878 | 0.180027 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g43510 | SBH | 0.066147 | 0.101168 | 0.039454 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0642500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023930 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0023740 | SBH | 0.119304 | 0.0 | 0.429621 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023920 | SBH | 0.874472 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0023480 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023940 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0081400 | SBH | 1.12522 | 11.593083 | 0.532187 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0023420 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0084000 | SBH | 2.403291 | 3.7092115 | 0.139474 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0023870 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0023810 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0023490 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0024140 | SBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0023730 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G023540 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0023750 | SBH | 0.0 | 0.0 | 0.000000 |
