Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_Ung0000780 OGI:99003190 | 1/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) ChrUN-Ctg31:818101-822982
Gene Symbol -
DNA seq

TCATAGCCAGCCGGTCAACATGTTCCCTCCCAAGGTCAGCTCGGTCAGCTTGCTTAGGTTACCGATCTCCGGTGGTATCACGCCGGAGAACGAGTTATTCGAAAGGTATAGCTTCTTGAGCCGCCAGAGCCGGCCGATCTCCCTGGGGATCTCGCCGTCGAGCCGGTTATTGTGTAACCAGAGCTCCTTCAGCCTCTGCGCCTTGCTGATCGCCGGCGAGATTCTTCCGGTGAACCCATTGTTCGAAACATCAATGATCTCCGCAGATTGTTGTCCCCACACCCACGCCGGGAGGTTGCCGGTGAGCGTGTTACCGTGAACTCGGAAGATCACCAAATGGTGGCAGGCCGAGTATTCCTCCGGGAGCTCGCCGGAGAAGCTGTTCCCGATGGTGAGAAGGTACTGGAGGTTCTTGCCGTGGCACAGATACCTCGGGAATGGGCCAGAGAATGCATTCTCGGAGATATCGATGCCGTAAAGCGGCGAGAAGCGGCCGAAGTTCGCCGGGAACTCGCCGGAGAAATTGTTCTCATAGACAGCAAATCTCTTCAGGAACCGTAGCTCCCCCCACGCTGCCGGGATCGGCCCAGATAGATTGTTCCACTGGAGATGTATCACCTCGAAGTTCCTGAGCACCGCAAGAGACGCCGGGATCTCGCCGCTGAGCTTGTTCCCGGAGACGTCGAGCTCGCGTAGCCCGGTCAGCTTCCCGAGCTCCGGTGGGAGCTCGCCTGTGAGGTTATTACTATACAGCTGGATGCTCCACAACTCGCAGAGGTTGCCGATGGCCGCCGGGATTCCGCCGGTGAGATAGTTCTTCGACATGTCCAGCGTCCGCAGCGCCGTGAGCCCGAAGATGGAGTCAGGTATCTCCCCTGTCAGGTAGCAGCTCGACAAGTAGAGATGCGTCAACTTCTTGAGGTTTCCGATGCTCAGCGGAGTCTCGCCTCGGTCGTAGCTGTTCTCGCCGACGGCGAGGATGACGAGACCGGACAGGTTGCCAACCCACGCCGGGAACCTCCCGGAGAAGCAATTGTTCGCGACGTCGAGGGTGTCGAGCGCCGCCAGCTTCGCCGACAAGTTCGGCAGCTCGCCGGTGAGGCCGTTGCAGGAGAGGTTGAGGAACTGGAGCTGCGTGCAGTTGCTCAGTTCAGGAGGCACTCCCCCCGAAATGGTGTTGTCGCCGAGATCGAGCCGTGTTAGGGCCGCGAGGGCGCCGATCGCCGGCGATATCCTGCCGGAGAGGTTCATGCTCGCCAGCGAGATCTCGGTGACCGTGCCGGTCACCGGATCACACTGGACGCCGAGGTAGCTGCACGGCGAGGTGGTGGCGTTCGTCGTCCATGATTGAAGATTGTCGAGAGGGTCAATCAAGCTGGCCTTGAATTGGACAAGTGCCTGAATCTGAATTTGGTGGTCAGATCGGCAGCTTGAGCTGAGTGATGAGGAGAGGAGTATGATAAGTGGGAGATGGCAGACAAGGATGTGCCTTCTCATTGCATGCAGGAGATGGTGTTCAGGATTGTCCTGCTGTTGGTTCAGCTCAGCTGATCTGAATGAAGAAGAGAGGCTACTTATCAGTTTAGGATACAATTAATTTATGGTGCTATTTGGTAGCCCTACATCATCATGTCATTGTAGAAACTATTTTGATACCTCGAGGGGATATCCCCTCGTTGTTTGCATGTCACTCAAATAGTTATGAAAAAATATGAAAAAATTTAAGAAAATATATGAACATGTGATATATCACTTCAAATTCAACTTCTACATCTCGCAACGAAAAAAACAAATTTAACTACAACTAGTTAATGTATATTCACACTCAAAATTGTTTTTTTCGTTGTGAGATGTAGAAGTTGGATTTAAACTCGTATGTTTGTGGAGTGATATATCATATATTATTACATCTTCTCAATTTTTTTAATTTTTTATAACTATTTGAACTATTTTTTATAACATGCAAATAACGAGGGAATATTCCTCGAGGGATCAAAATCAACTCCCCATGTTATTGATACGTGGAGTAAAGATTCTATGAAACAAAAGGTCAACAATCTATAGACTTGGGGATAGAGCGGGTCTTCAGTGAGATTTGGGGCATCCGGATTTTATATCCGTATAAACACATCATTATCATCTTGGACATGCAGAGATTGGTATGCTCGGCATTATATCCATCCCGGTCTTTACTCTTTTGCTTCCTATTCAGATTAAAGATGTCAACCCAAACATGGAAAGCTGTATATAAATAGAACACTTTAACCATGCGCATAGTTGGTCAACTTTAAAGATATATCCCATATTTACGTCACCGACAATTCTCACCATTGTCGACAAGTCGTTTTGACTTTGGTCAAAGACAAACTACTCTAAATTTGATTAGGTTTGTAAATAAATATACTAATATTTACAACACGAATTAGTGTCATTAAATCAATAATTTAATATATTTTCATAATATATTTGTCTTGGGTTGAAAATATTTATTTTTCTACTAGAAAAAATGCTCGTGCGTTGCAATGGGTGAATGTTATTTTAATATTATTATTATTGTTATACAATTTAGTTAAAGTGAAATATATTGTGGGAATTCGCTTGGATATATATTCTGTTTTTAGAAAATCGTGAGCTGCAATTAGGAATCCGGTCGTCTCAAGTTAGCATGCGAGTTGTTTTAAGAGATTTCTTATACGAATCCTTCTATATTTCCAAAAGCAAACAGATTTAGAAACTGACTCAAATATGGATATGTATTTCCAAAGGCAAACGAACTTAGAAACCGATTTATACATGAATAATGTACCAAAGTATCGGTAAAAACATCTTTAATATTTATAATAGTAGAGATAAACTTGGTTAAACTTGAAACAGTTTGACCGAAGTTAAAATGACTTATAATATGAAACAGGGGAGTACTGAATTAATCATTAATTAGTCAAGTAATGGGTCAAAATTGCCTGAGCACTCATTGCAGAATGTAATGGGGGTTTAATGATGACATAGAGAGTCTGGGAAGAAAATATGGTAAGGGCAATTTTAGTGGGATATGCTTTACCAGTTAGTCTTCTAGTGTGGATAGCTTTTTTTTTCCCTTAAAAGAATGTCCCGCTCGTTTCTTCCATGCATCAAAATAGTTATGATTTTTTAAAAAAATATTTGGATATTATATATCAATATATGATATGTCACTCCACGATGATGCATGTTTAAATTTGACCTATACAATTCAAATATGATTGTGAATGTTACACGTACTATTCATAATCATATTTGACTTTTTCTCAATTTCTATAGGTTGAATTTAAACTTGTGTATTTATAAAGATGTATACTACATATTGATTTATGTTGTCAATATTTTTATAATTTTTTAACCAAAAGGCAGGAGTTCTGCTAGTCCAATATTAAGAAGAAAAGAGTTCTTCACCAATAACAACATCGATATCACAGTGGCTTTGAGAAGGGCTTACGAGCTGCTCCCTCCATTTCGAAATGTATAACGTCGTTGACTTTTCACATAATGTTTTACCATTCGTATTATTAAAAAAATATATAATATTGTTAATCTTGTTATGACTTATTTTATCATCAAATGAAGTATAATCATAACTTATAATTTTAAATATATATTTGTACTAAATTTTTAAATAAGATAAATGGTTAAACATTGTGTGAAAATTCAATGGCGTCATACATATACATTTTAAAAGGAGGTAGGATTTTACCCGTGATTATCAAAAACACAACTTAATAAACCTCCACAGCCAGCTAGGAAACTAACAAGTGTCGATTCAAGTATTGCACTAGTCAGATACGCAACTGGTTCTTCATTTCTTTCCACCTAATGGAAGACTCTTCTGTTTCTTTCGAGTCAAATACTCAAATGTTCCCCGAGTGGCGAGTAAGCCCCCCACAAATTTCTTCTTTTCTTCATCATTAATTATGATGTCTGGTTCTCCCACCAGCTTGTCACCACTCCGAAATTCCTGCGTGTTCATCTGGATGCACGACCGGTTGTAAATCTCTCCAAATTGCGACAAGATTTGACACTACTTTTTGTATACTCACATTCCTTGGAAAGATGAATCCACAATTTCAAAGGCTTCATGACACATAGCAAATCCAGTATATTCACGCCAGTGTCTACAGAGCAAAATTTCAGACATTAGCGTGTGTTTTTTTTTTTTTTGGAGCAAGAGGCAACCGAAGTTTAAGTTCGGGCCCATCCACTGACTTCCACAAGTTTTTGAATTTTATTTGAGGAAACGAGCCATGGAATTGTACCACGGATTTTTTTATAATGGATTCGTTAATCTGGCCTTTATATCCATGAAGAATATACATAGCGAAAAGAATATAAGGATACTGAGACTCATATCTCCACGAGAGAACACATAACCAAAGAAAGAACAAACCTACTACCTTGGCACACCCATGGTTCACGAGTGGAAGTTATCTAGTTGTCGCAGTCCCTAGTGCACCGTCGTTGTGTACCTCCACTGTTGCCATCTTCATCTGCTTCAGGTGAGTTCACGCCATTCATCAGTCGTCATCTAGTCATAACTAGCCGACCAGACGCGAACCGATAGGATCCGTTTTTGCTTCGCCGGATCCTAGGCCTCCCCCATCCATAGGGCTGCCGCCGTCATTGGGATCCTCTTCCGCCTCTCGGACTCACATCCTGCCGCCGCCCCTAGGGCCGCGGCCTCTGCCGAGGTCCACAAATCTTGCCGAAATCTCAATCCTCCTCCGCCACTGCCGAGGATATCCTCTTCCACCCGGACTCCCAAGCCTCCGTCACCCCTAGGGCCGCCATTGTCAATGAGATTCACCCCTGTCTGAACTGCCTCCTCCTCGCCGAGAATCTTGCACAGTTGCAT

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CDS seq

ATGCAACTGTGCAAGATTCTCGGCGAGGAGGAGGCAGTTCAGACAGGGGTGAATCTCATTGACAATGGCGGCCCTAGGGGTGACGGAGGCTTGGGAGTCCGGGTGGAAGAGGATATCCTCGGCAGTGGCGGAGGAGGATTGAGATTTCGGCAAGATTTGTGGACCTCGGCAGAGGCCGCGGCCCTAGGGGCGGCGGCAGGATGTGAACACTGGCGTGAATATACTGGATTTGCTATGTGTCATGAAGCCTTTGAAATTGTGGATTCATCTTTCCAAGGAATATCAGCTGAGCTGAACCAACAGCAGGACAATCCTGAACACCATCTCCTGCATGCAATGAGAAGGCACATCCTTGTCTGCCATCTCCCACTTATCATACTCCTCTCCTCATCACTCAGCTCAAGCTGCCGATCTGACCACCAAATTCAGATTCAGGCACTTGTCCAATTCAAGGCCAGCTTGATTGACCCTCTCGACAATCTTCAATCATGGACGACGAACGCCACCACCTCGCCGTGCAGCTACCTCGGCGTCCAGTGTGATCCGGTGACCGGCACGGTCACCGAGATCTCGCTGGCGAGCATGAACCTCTCCGGCAGGATATCGCCGGCGATCGGCGCCCTCGCGGCCCTAACACGGCTCGATCTCGGCGACAACACCATTTCGGGGGGAGTGCCTCCTGAACTGAGCAACTGCACGCAGCTCCAGTTCCTCAACCTCTCCTGCAACGGCCTCACCGGCGAGCTGCCGAACTTGTCGGCGAAGCTGGCGGCGCTCGACACCCTCGACGTCGCGAACAATTGCTTCTCCGGGAGGTTCCCGGCGTGGGTTGGCAACCTGTCCGGTCTCGTCATCCTCGCCGTCGGCGAGAACAGCTACGACCGAGGCGAGACTCCGCTGAGCATCGGAAACCTCAAGAAGTTGACGCATCTCTACTTGTCGAGCTGCTACCTGACAGGGGAGATACCTGACTCCATCTTCGGGCTCACGGCGCTGCGGACGCTGGACATGTCGAAGAACTATCTCACCGGCGGAATCCCGGCGGCCATCGGCAACCTCTGCGAGTTGTGGAGCATCCAGCTGTATAGTAATAACCTCACAGGCGAGCTCCCACCGGAGCTCGGGAAGCTGACCGGGCTACGCGAGCTCGACGTCTCCGGGAACAAGCTCAGCGGCGAGATCCCGGCGTCTCTTGCGGTGCTCAGGAACTTCGAGGTGATACATCTCCAGTGGAACAATCTATCTGGGCCGATCCCGGCAGCGTGGGGGGAGCTACGGTTCCTGAAGAGATTTGCTGTCTATGAGAACAATTTCTCCGGCGAGTTCCCGGCGAACTTCGGCCGCTTCTCGCCGCTTTACGGCATCGATATCTCCGAGAATGCATTCTCTGGCCCATTCCCGAGGTATCTGTGCCACGGCAAGAACCTCCAGTACCTTCTCACCATCGGGAACAGCTTCTCCGGCGAGCTCCCGGAGGAATACTCGGCCTGCCACCATTTGGTGATCTTCCGAGTTCACGGTAACACGCTCACCGGCAACCTCCCGGCGTGGGTGTGGGGACAACAATCTGCGGAGATCATTGATGTTTCGAACAATGGGTTCACCGGAAGAATCTCGCCGGCGATCAGCAAGGCGCAGAGGCTGAAGGAGCTCTGGTTACACAATAACCGGCTCGACGGCGAGATCCCCAGGGAGATCGGCCGGCTCTGGCGGCTCAAGAAGCTATACCTTTCGAATAACTCGTTCTCCGGCGTGATACCACCGGAGATCGGTAACCTAAGCAAGCTGACCGAGCTGACCTTGGGAGGGAACATGTTGACCGGCTGGCTATGA

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Protein seq

MQLCKILGEEEAVQTGVNLIDNGGPRGDGGLGVRVEEDILGSGGGGLRFRQDLWTSAEAAALGAAAGCEHWREYTGFAMCHEAFEIVDSSFQGISAELNQQQDNPEHHLLHAMRRHILVCHLPLIILLSSSLSSSCRSDHQIQIQALVQFKASLIDPLDNLQSWTTNATTSPCSYLGVQCDPVTGTVTEISLASMNLSGRISPAIGALAALTRLDLGDNTISGGVPPELSNCTQLQFLNLSCNGLTGELPNLSAKLAALDTLDVANNCFSGRFPAWVGNLSGLVILAVGENSYDRGETPLSIGNLKKLTHLYLSSCYLTGEIPDSIFGLTALRTLDMSKNYLTGGIPAAIGNLCELWSIQLYSNNLTGELPPELGKLTGLRELDVSGNKLSGEIPASLAVLRNFEVIHLQWNNLSGPIPAAWGELRFLKRFAVYENNFSGEFPANFGRFSPLYGIDISENAFSGPFPRYLCHGKNLQYLLTIGNSFSGELPEEYSACHHLVIFRVHGNTLTGNLPAWVWGQQSAEIIDVSNNGFTGRISPAISKAQRLKELWLHNNRLDGEIPREIGRLWRLKKLYLSNNSFSGVIPPEIGNLSKLTELTLGGNMLTGWL

Function Receptor protein-tyrosine kinase CEPR2 [UniProtKB/Swiss-Prot:Q9C7T7]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_Ung0000780 OsLima_Ung0000780.01 ChrUN-Ctg31 818101 822982 - NAM
CDS seq

ATGCAACTGTGCAAGATTCTCGGCGAGGAGGAGGCAGTTCAGACAGGGGTGAATCTCATTGACAATGGCGGCCCTAGGGGTGACGGAGGCTTGGGAGTCCGGGTGGAAGAGGATATCCTCGGCAGTGGCGGAGGAGGATTGAGATTTCGGCAAGATTTGTGGACCTCGGCAGAGGCCGCGGCCCTAGGGGCGGCGGCAGGATGTGAACACTGGCGTGAATATACTGGATTTGCTATGTGTCATGAAGCCTTTGAAATTGTGGATTCATCTTTCCAAGGAATATCAGCTGAGCTGAACCAACAGCAGGACAATCCTGAACACCATCTCCTGCATGCAATGAGAAGGCACATCCTTGTCTGCCATCTCCCACTTATCATACTCCTCTCCTCATCACTCAGCTCAAGCTGCCGATCTGACCACCAAATTCAGATTCAGGCACTTGTCCAATTCAAGGCCAGCTTGATTGACCCTCTCGACAATCTTCAATCATGGACGACGAACGCCACCACCTCGCCGTGCAGCTACCTCGGCGTCCAGTGTGATCCGGTGACCGGCACGGTCACCGAGATCTCGCTGGCGAGCATGAACCTCTCCGGCAGGATATCGCCGGCGATCGGCGCCCTCGCGGCCCTAACACGGCTCGATCTCGGCGACAACACCATTTCGGGGGGAGTGCCTCCTGAACTGAGCAACTGCACGCAGCTCCAGTTCCTCAACCTCTCCTGCAACGGCCTCACCGGCGAGCTGCCGAACTTGTCGGCGAAGCTGGCGGCGCTCGACACCCTCGACGTCGCGAACAATTGCTTCTCCGGGAGGTTCCCGGCGTGGGTTGGCAACCTGTCCGGTCTCGTCATCCTCGCCGTCGGCGAGAACAGCTACGACCGAGGCGAGACTCCGCTGAGCATCGGAAACCTCAAGAAGTTGACGCATCTCTACTTGTCGAGCTGCTACCTGACAGGGGAGATACCTGACTCCATCTTCGGGCTCACGGCGCTGCGGACGCTGGACATGTCGAAGAACTATCTCACCGGCGGAATCCCGGCGGCCATCGGCAACCTCTGCGAGTTGTGGAGCATCCAGCTGTATAGTAATAACCTCACAGGCGAGCTCCCACCGGAGCTCGGGAAGCTGACCGGGCTACGCGAGCTCGACGTCTCCGGGAACAAGCTCAGCGGCGAGATCCCGGCGTCTCTTGCGGTGCTCAGGAACTTCGAGGTGATACATCTCCAGTGGAACAATCTATCTGGGCCGATCCCGGCAGCGTGGGGGGAGCTACGGTTCCTGAAGAGATTTGCTGTCTATGAGAACAATTTCTCCGGCGAGTTCCCGGCGAACTTCGGCCGCTTCTCGCCGCTTTACGGCATCGATATCTCCGAGAATGCATTCTCTGGCCCATTCCCGAGGTATCTGTGCCACGGCAAGAACCTCCAGTACCTTCTCACCATCGGGAACAGCTTCTCCGGCGAGCTCCCGGAGGAATACTCGGCCTGCCACCATTTGGTGATCTTCCGAGTTCACGGTAACACGCTCACCGGCAACCTCCCGGCGTGGGTGTGGGGACAACAATCTGCGGAGATCATTGATGTTTCGAACAATGGGTTCACCGGAAGAATCTCGCCGGCGATCAGCAAGGCGCAGAGGCTGAAGGAGCTCTGGTTACACAATAACCGGCTCGACGGCGAGATCCCCAGGGAGATCGGCCGGCTCTGGCGGCTCAAGAAGCTATACCTTTCGAATAACTCGTTCTCCGGCGTGATACCACCGGAGATCGGTAACCTAAGCAAGCTGACCGAGCTGACCTTGGGAGGGAACATGTTGACCGGCTGGCTATGA

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Protein seq

MQLCKILGEEEAVQTGVNLIDNGGPRGDGGLGVRVEEDILGSGGGGLRFRQDLWTSAEAAALGAAAGCEHWREYTGFAMCHEAFEIVDSSFQGISAELNQQQDNPEHHLLHAMRRHILVCHLPLIILLSSSLSSSCRSDHQIQIQALVQFKASLIDPLDNLQSWTTNATTSPCSYLGVQCDPVTGTVTEISLASMNLSGRISPAIGALAALTRLDLGDNTISGGVPPELSNCTQLQFLNLSCNGLTGELPNLSAKLAALDTLDVANNCFSGRFPAWVGNLSGLVILAVGENSYDRGETPLSIGNLKKLTHLYLSSCYLTGEIPDSIFGLTALRTLDMSKNYLTGGIPAAIGNLCELWSIQLYSNNLTGELPPELGKLTGLRELDVSGNKLSGEIPASLAVLRNFEVIHLQWNNLSGPIPAAWGELRFLKRFAVYENNFSGEFPANFGRFSPLYGIDISENAFSGPFPRYLCHGKNLQYLLTIGNSFSGELPEEYSACHHLVIFRVHGNTLTGNLPAWVWGQQSAEIIDVSNNGFTGRISPAISKAQRLKELWLHNNRLDGEIPREIGRLWRLKKLYLSNNSFSGVIPPEIGNLSKLTELTLGGNMLTGWL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0233000 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g12560 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0233000 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0008290 SBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0008190 SBH 0.0 0.566301 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0008140 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0008020 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0008080 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0107800 SBH 0.0079745 0.1526635 0.0249325
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0008110 SBH 0.0 0.000000 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0114300 SBH 0 0.166558 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0008170 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0008250 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0008220 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0065320 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0008190 SBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G008260 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0008120 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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