Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_12g0012780 | OGI:12048250 | 8/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr12:17176575-17177615 | ||||||||
| Gene Symbol | WAK68, OsWAK68, OsRLCK225, RLCK225, WAK125, OsWAK125, OsRLCK368, RLCK368, OsWAK-RLP, RLCK370, OsRLCK370 | ||||||||||
| DNA seq | atgtcgcaaaatgcaaatattggtgaaagaatgatattgaccttacgggagctagaaaaagcaacggacaattttgataaaactcgtgaagttggtggtggaggacatggcattgtatacaaaggaattttagacttgcatgttgttgccattaaaaaatcaaggattgtagtgcaaagagaaatagatgattttataaatgaagttgcaatcctttcccaagtgaatcatagaaatgtggtgaagcttctaggatgttgccttgagacagaagttccattgttggtttatgaattcatttcaaatggatctcttgatgatcatcttcacgtcgatggacctatatctctatcatgggtggaccgaataaggattgcacttgaagttagtagagccttggtctatctacactcagccgcaacaacaccaatattccatagagatatcaaggcatctaacgtacttcttgatgataatttaacagcaaagatatctaactttggagcttcaaggtacattccgattgatcagactggagtgactacggttgttcaaggaacaattggttacctagatcccatgtactactatactggtcgtctaaccgataaaagtgatgtttttagttttggtgttcttcttatagaactacttacccgaaaaaagcctatctataggactgatagaggtgatagtcttgttccacattttgcctccctactggaagaaggcaaaTtggttgaaataatagatccccaagtcaaggaagaggaggatggggaggttgaagaagtagcaacactagcagcaatgtgtactaagttgaatggacaagaccgaccaacaatgagagaagtggaaataaggcttgaaaacttgcgagctaaaaccaaacttgctccatataatatagaaccaagtagatatgaagtatcccgagttgcagggcattgcatatcagctagaggggacatcgaagaaccaagtagacagtacaacatggaagatgagatgttgtcgttagaaaggtatcctagatga
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| CDS seq | atgtcgcaaaatgcaaatattggtgaaagaatgatattgaccttacgggagctagaaaaagcaacggacaattttgataaaactcgtgaagttggtggtggaggacatggcattgtatacaaaggaattttagacttgcatgttgttgccattaaaaaatcaaggattgtagtgcaaagagaaatagatgattttataaatgaagttgcaatcctttcccaagtgaatcatagaaatgtggtgaagcttctaggatgttgccttgagacagaagttccattgttggtttatgaattcatttcaaatggatctcttgatgatcatcttcacgtcgatggacctatatctctatcatgggtggaccgaataaggattgcacttgaagttagtagagccttggtctatctacactcagccgcaacaacaccaatattccatagagatatcaaggcatctaacgtacttcttgatgataatttaacagcaaagatatctaactttggagcttcaaggtacattccgattgatcagactggagtgactacggttgttcaaggaacaattggttacctagatcccatgtactactatactggtcgtctaaccgataaaagtgatgtttttagttttggtgttcttcttatagaactacttacccgaaaaaagcctatctataggactgatagaggtgatagtcttgttccacattttgcctccctactggaagaaggcaaaTtggttgaaataatagatccccaagtcaaggaagaggaggatggggaggttgaagaagtagcaacactagcagcaatgtgtactaagttgaatggacaagaccgaccaacaatgagagaagtggaaataaggcttgaaaacttgcgagctaaaaccaaacttgctccatataatatagaaccaagtagatatgaagtatcccgagttgcagggcattgcatatcagctagaggggacatcgaagaaccaagtagacagtacaacatggaagatgagatgttgtcgttagaaaggtatcctagatga
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| Protein seq | MSQNANIGERMILTLRELEKATDNFDKTREVGGGGHGIVYKGILDLHVVAIKKSRIVVQREIDDFINEVAILSQVNHRNVVKLLGCCLETEVPLLVYEFISNGSLDDHLHVDGPISLSWVDRIRIALEVSRALVYLHSAATTPIFHRDIKASNVLLDDNLTAKISNFGASRYIPIDQTGVTTVVQGTIGYLDPMYYYTGRLTDKSDVFSFGVLLIELLTRKKPIYRTDRGDSLVPHFASLLEEGKLVEIIDPQVKEEEDGEVEEVATLAAMCTKLNGQDRPTMREVEIRLENLRAKTKLAPYNIEPSRYEVSRVAGHCISARGDIEEPSRQYNMEDEMLSLERYPR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_12g0012780 | OsLima_12g0012780.01 | Chr12 | 17176575 | 17177615 | + | NAM | ||
| CDS seq | atgtcgcaaaatgcaaatattggtgaaagaatgatattgaccttacgggagctagaaaaagcaacggacaattttgataaaactcgtgaagttggtggtggaggacatggcattgtatacaaaggaattttagacttgcatgttgttgccattaaaaaatcaaggattgtagtgcaaagagaaatagatgattttataaatgaagttgcaatcctttcccaagtgaatcatagaaatgtggtgaagcttctaggatgttgccttgagacagaagttccattgttggtttatgaattcatttcaaatggatctcttgatgatcatcttcacgtcgatggacctatatctctatcatgggtggaccgaataaggattgcacttgaagttagtagagccttggtctatctacactcagccgcaacaacaccaatattccatagagatatcaaggcatctaacgtacttcttgatgataatttaacagcaaagatatctaactttggagcttcaaggtacattccgattgatcagactggagtgactacggttgttcaaggaacaattggttacctagatcccatgtactactatactggtcgtctaaccgataaaagtgatgtttttagttttggtgttcttcttatagaactacttacccgaaaaaagcctatctataggactgatagaggtgatagtcttgttccacattttgcctccctactggaagaaggcaaaTtggttgaaataatagatccccaagtcaaggaagaggaggatggggaggttgaagaagtagcaacactagcagcaatgtgtactaagttgaatggacaagaccgaccaacaatgagagaagtggaaataaggcttgaaaacttgcgagctaaaaccaaacttgctccatataatatagaaccaagtagatatgaagtatcccgagttgcagggcattgcatatcagctagaggggacatcgaagaaccaagtagacagtacaacatggaagatgagatgttgtcgttagaaaggtatcctagatga
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| Protein seq | MSQNANIGERMILTLRELEKATDNFDKTREVGGGGHGIVYKGILDLHVVAIKKSRIVVQREIDDFINEVAILSQVNHRNVVKLLGCCLETEVPLLVYEFISNGSLDDHLHVDGPISLSWVDRIRIALEVSRALVYLHSAATTPIFHRDIKASNVLLDDNLTAKISNFGASRYIPIDQTGVTTVVQGTIGYLDPMYYYTGRLTDKSDVFSFGVLLIELLTRKKPIYRTDRGDSLVPHFASLLEEGKLVEIIDPQVKEEEDGEVEEVATLAAMCTKLNGQDRPTMREVEIRLENLRAKTKLAPYNIEPSRYEVSRVAGHCISARGDIEEPSRQYNMEDEMLSLERYPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0615100 | SBH | 0.514660 | 0.809248 | 0.784058 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g29434 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0615100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0013140 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0008850 | SBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0008860 | SBH | 0.950474 | 3.156276 | 0.382495 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0012940 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0020140 | SBH | 0.299156 | 0.999180 | 1.147700 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0242800 | RBH | 0 | 6.289524 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0008550 | SBH | 0.055993 | 0.092823 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0263100 | RBH | 0 | 0.2563965 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0019880 | SBH | 0.0 | 0.335794 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0013120 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0012950 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0012910 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0008770 | SBH | 0.204621 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G012790 | RBH | 0.0 | 0.393469 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0012450 | RBH | 0.0 | 0.0 | 0.0 |
