Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g29434 | OGI:12048250 | 8/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:17482835-17487133 | ||||||||
| Gene Symbol | WAK125, OsWAK125, OsRLCK368, RLCK368, OsWAK-RLP | ||||||||||
| DNA seq | ATGGTCAAAGTTATTTTTAACTTTTTTGAAGACCGTGCCCTTGTCTTAAACGACAAGTATTTTCAATCCGGAAGGAGTACGGTTCTTAGGATGAGATGAAACCTTTTTTGGAAAAATTCCTAAGGAATTAAATAGATGTGATATTCTAATCCTTTACTTTACGTAATTTCTTGATTTGGAAATCCTATGAGCCAAGGATTACAATTTCGATTTCACCCAAAATTTAGCTCATTTCGGTTCTACCAAAATCCCTGAAATTTCTGGATTTTTGGGCCAAAATTTCTTGAAATTTTAACATAATTTAACTGAATTTGACTAAATTTGCAAAATTCTGAGAGAAAAAGGAAATCTTGGCCGAGATAATCACTTGCCGGGTTGGAAATTTTGAACCAAAATTGCAATCCTGCTATGAACCGAATAGGGCACTTAGAATGCTCAACTATATATGTCTTAATTAAATACTACCTCCATTTGTTTTTGCCCAGTTTATATCTACGCAATCTTCAATACACAATTTATCATTACTTTCTAACTATGTATGTTTATGAAAGCTTTAAAAGTATAGTAACAATATAAGTGTTTTTTATGACAAATAATATATCAATTACCATTTTCTCTTCTCTAATGTTTTCATTAAACAATCATTTAAAGTTTCAAGGTTTGGTTGCATAAAGTAATTTTAGATGACATCTATTTAAGAATATTAGTACTAACACAAGTTGTTTTAGAACTTTTATGCATTATCTTTTCTGTTTTACCTATGTTTGATTTTTCTAAAAAAAAATGTGTTACCACTCTCTTTAGTATAAATGATGAGCAGTAAGGTTATTTTCCTTCTTTCGATCTGTGCATACATTTAAAAGGACTGTTTCTGTCAAAAATTATAAAATACTTACATTTAGAATCAGAGGAAATTAATATCCTAGTCATTGGTACGTCCCTTTATTTCTTCAGGTTCATTAATGTTTCAATGACTCGCCTAACTAAAATATACGCTCATGATTATTTGTTAGATATCGATGAATGTCATTCCCCTGGCTACTGTTATGGAGATTGCAAGAACACAGAAGGAGGGTATCTTTGCCAGTGTCCTCTCGGCTTAACGGGCAATGCTTCAATTCCAAATGGATGTAAAGGTATAACGACTTAACTAAGTAGCGGGAGTATTCAGTTAGGCATCATCAAGTCCGATTGTTTTTTTTTTTGAAAAATATGGCGCCATAAATATAGCTACTCCCTTTCAAATTATATAACTTCGACCACTAATTTGTGCTCTCCAATGTTTAATAAACATCTCTAATATTACAATATATATTATGTTTAATAAACATTTTAAATATTACAATGTATATTTTTAATAAACAATTTCTAACAACATGTATATGTGATCCCTCCGTTTCAGATAATAAGTCGTTTTGATTTTGGTTAAAGTCAAACTACTCCAAATTTAATCAAGTTTGTAGATAAATATATATAATAATATTTACAACACTAAATTAGTTTCATTAAATCTATAATTGAGTATATTTTCATAATATATTTGTTTTGAGTTAAAAATGTTACTACTTGTTTCTAAATATATATTTAAAAAGACGATGAGACAAACTTTTGAAACTTTAGTCGGATGCTTATCAAAATGATTTGTGTTTGTGAACATAGGAAGTAGTTAGCTTGCTAGAGTTTTATGCAATATTGGCTCCCCATATATGGCTATGTTATTTACTAATCTGGCTTTTCTCTTGACTTGTTATCGTTCTTCTTTCCCATGATTAATTAATTTGGTCATCATATATTCTTCTATGTTATATTTCTTCTAGACATTGATGAGTGTATGCACCCGGAATCTTACTCATGCTATGGACAATGTGTGAATACGTTTGGGAGTTTTCAATGCCATTGCCACAGTGGAACCGAGGGGGATCCAACAATAAGAGGAGGGTGTATTAAGATCAAGCATTCTGTGTCAAGTACCAATATTGTACTCCCTCCATCAAAGAATACAATCCAAGCATTCAAATCTTATAAAGAAGATTACAATTATAGAGTACTACTTTCTATCCAAACACCTCTCGTTCAAATTTTCTCCATCTTAGCCCCAACCACCATCCCACTCCCAACCACCTCTTATTTACTACAAGACATCTAAGATATTTTCCTTTCCTACTAGTTTGTCTTTTGAATGCTATGATTGTATTACTGTTAGGACAAATGGAGTAACAAACACACACACACACACACACACATATTACTTATTTATTTATGTATGTTCTTGATCCAAATTCTTGAATTCTTTCCTTTACGAATTTTCAGGTTTAACAATTGGTTTGGGAGTTAGTGGTGGCATAAGTATTTTAAGGAAAAGGCTATACGTACTAACTTTTTTTTACTAAATTCTTACTAACACTGATGTGTCATGCTATGAGTCCATCTAGATTTTTTTATAACTTCCATCTACTTAAATCAAACGGTTGAGATGATTGTTAGTAAAAGTTTAGTAAGAAAAATTTAGTATGTGTAGCATTGCTCGTATTTTAATTATGGCACTTTCTGCACCTTTCATAGTACAGAAAATAAAGCTACATAAGGTGAAAAGGATGAAAGAGATATTTTTCAAGCAAAATCATGGGCTACTCCTGCAACAATTGATGTCACAAAATGCAAATATTGGTGAAAGAATGATATTGACCTTACGGGAGCTAGAAAAAGCAACGGACAATTTTGATAAAACTCGTGAAGTTGGTGGTGGAGGACATGGCATTGTATACAAAGGAATTTTAGACTTGCATTTTGTTGCCATTAAAAAATCAAGGATTGTAGTGCAAAGAGAAATAGATGATTTTATAAATTAAGTTGCAATCCTTTCCCAAGTGAATCATAGAAATGTGGTGAAGCTTCTAGGATGTTGCCTTGAGACAGAAGTTCCATTGTTGGTTTATGAATTCATTTCAAATGGATCTCTTGATGATCATCTTCACGTCGATGGACCTATATCTCTATCATGGGTGGACCGAATAAGGATTGCACTTGAAGTTAGTAGAGCCTTGGTCTATCTACACTCAGCCGCAACAACACCAATATTCCATAGAGATATCAAGGCATCTAACGTACTTCTTGATGATAATTTAACAGCAAAGATATCAGACTTTGGAGCTTCAAGGTACATTCTAATTGATCAGACTGGAGTGACTACGGTTGTTCAAGGAACAATTGGTTACCTAGATCCCATGTACTACTATACCGGTCGTCTAACCAACAAAAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATAGAACTACTTACCCGAAAAAAGCCTATCTATAGGACTGATAGAGGTGATAGTCTTGTTCCACATTTTGCCTCACTACTGGAAGAAGGCAAATTGGTTGAAATAATAGATCCCCAAGTCAAGGAAGAGGAGAATGGGGAGGTTGAAGAAGTAGCAACACTAGCGGCAATGTGTACTAAGTTGAATGGACAAGACCGACCAACAATGAGAGAAGTGGAAATAAGGCTTGAAAACTTGCGAGCTAAAACCAAACATGCTCCATATAATAAAGAACCAAGTAGATATGAAGTATCCCGAGTTGCAGGGCATTGCATATCAGCTAGAGGGGACATCGAAGAAGTACTAATAAGTAGACACAGCATGGAAGATGAGATGTTGTCGTTAGAAAGGTATCCTAGATGATATCGTGTTTCCGCGTCTCTAATCGCCATAATATTGTTTAGTAGAGGAATATATTGCTACTTTCTACATTTTTTTTCCTTTGTGTAATGCTCTTTTGTAAAAAGAAGAAAATGCCATGGCTTTGTTTCATGTTACAAAAAGGACTAAGGCCACTCTGTATACATTAATTGGATTTGAAAGATCTATGCACTAGAGTTGCCTTGTAAGGGGAGATTGGAATATCTATGATCCTAAGAGTGCGGTGATTGTTTTGGTGATTAATGACAACCCATTGTTGGAACTAACTATTTCCATGAGTTGGTGAGATTAGGTTAAGTTCCGGCATCAAGTTAAAAGATTAAAGCTAGAAGATGGACATTATACCTTGATGAGGAGCAAGTGAAGATATTGATGATGCGGGGTATGAAATGGCTATCTATGGCAAACCGGTGAAGAGAAAGCAAAGCTAGGCTAGAAGATGGACATTATACCTTGATGAGGAGCAAGTGAAGACATTGATGATGCGGGGTATGAAGTGGCTATTTATGGCAAAACGGTGAAGGGCAAGCAAGGCTCGGCTACAATGGACCATGCGGGGAGAGGCTTGGCACCGATGGACCGAATCCGGTAG
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| CDS seq | ATGGTCAAAGTTATTTTTAACTTTTTTGAAGACCGTGCCCTTGTCTTAAACGACAAAAATGTGGTGAAGCTTCTAGGATGTTGCCTTGAGACAGAAGTTCCATTGTTGGTTTATGAATTCATTTCAAATGGATCTCTTGATGATCATCTTCACGTCGATGGACCTATATCTCTATCATGGGTGGACCGAATAAGGATTGCACTTGAAGTTAGTAGAGCCTTGGTCTATCTACACTCAGCCGCAACAACACCAATATTCCATAGAGATATCAAGGCATCTAACGTACTTCTTGATGATAATTTAACAGCAAAGATATCAGACTTTGGAGCTTCAAGGTACATTCTAATTGATCAGACTGGAGTGACTACGGTTGTTCAAGGAACAATTGGTTACCTAGATCCCATGTACTACTATACCGGTCGTCTAACCAACAAAAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATAGAACTACTTACCCGAAAAAAGCCTATCTATAGGACTGATAGAGGTGATAGTCTTGTTCCACATTTTGCCTCACTACTGGAAGAAGGCAAATTGGTTGAAATAATAGATCCCCAAGTCAAGGAAGAGGAGAATGGGGAGGTTGAAGAAGTAGCAACACTAGCGGCAATGTGTACTAAGTTGAATGGACAAGACCGACCAACAATGAGAGAAGTGGAAATAAGGCTTGAAAACTTGCGAGCTAAAACCAAACATGCTCCATATAATAAAGAACCAAGTAGATATGAAGTATCCCGAGTTGCAGGGCATTGCATATCAGCTAGAGGGGACATCGAAGAAGTACTAATAAGTAGACACAGCATGGAAGATGAGATGTTGTCGTTAGAAAGTGAAGACATTGATGATGCGGGGTATGAAGTGGCTATTTATGGCAAAACGGTGAAGGGCAAGCAAGGCTCGGCTACAATGGACCATGCGGGGAGAGGCTTGGCACCGATGGACCGAATCCGGTAG
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| Protein seq | MVKVIFNFFEDRALVLNDKNVVKLLGCCLETEVPLLVYEFISNGSLDDHLHVDGPISLSWVDRIRIALEVSRALVYLHSAATTPIFHRDIKASNVLLDDNLTAKISDFGASRYILIDQTGVTTVVQGTIGYLDPMYYYTGRLTNKSDVFSFGVLLIELLTRKKPIYRTDRGDSLVPHFASLLEEGKLVEIIDPQVKEEENGEVEEVATLAAMCTKLNGQDRPTMREVEIRLENLRAKTKHAPYNKEPSRYEVSRVAGHCISARGDIEEVLISRHSMEDEMLSLESEDIDDAGYEVAIYGKTVKGKQGSATMDHAGRGLAPMDRIR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g29434 | LOC_Os12g29434.1 | Chr12 | 17482835 | 17487133 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTCAAAGTTATTTTTAACTTTTTTGAAGACCGTGCCCTTGTCTTAAACGACAAAAATGTGGTGAAGCTTCTAGGATGTTGCCTTGAGACAGAAGTTCCATTGTTGGTTTATGAATTCATTTCAAATGGATCTCTTGATGATCATCTTCACGTCGATGGACCTATATCTCTATCATGGGTGGACCGAATAAGGATTGCACTTGAAGTTAGTAGAGCCTTGGTCTATCTACACTCAGCCGCAACAACACCAATATTCCATAGAGATATCAAGGCATCTAACGTACTTCTTGATGATAATTTAACAGCAAAGATATCAGACTTTGGAGCTTCAAGGTACATTCTAATTGATCAGACTGGAGTGACTACGGTTGTTCAAGGAACAATTGGTTACCTAGATCCCATGTACTACTATACCGGTCGTCTAACCAACAAAAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATAGAACTACTTACCCGAAAAAAGCCTATCTATAGGACTGATAGAGGTGATAGTCTTGTTCCACATTTTGCCTCACTACTGGAAGAAGGCAAATTGGTTGAAATAATAGATCCCCAAGTCAAGGAAGAGGAGAATGGGGAGGTTGAAGAAGTAGCAACACTAGCGGCAATGTGTACTAAGTTGAATGGACAAGACCGACCAACAATGAGAGAAGTGGAAATAAGGCTTGAAAACTTGCGAGCTAAAACCAAACATGCTCCATATAATAAAGAACCAAGTAGATATGAAGTATCCCGAGTTGCAGGGCATTGCATATCAGCTAGAGGGGACATCGAAGAAGTACTAATAAGTAGACACAGCATGGAAGATGAGATGTTGTCGTTAGAAAGTGAAGACATTGATGATGCGGGGTATGAAGTGGCTATTTATGGCAAAACGGTGAAGGGCAAGCAAGGCTCGGCTACAATGGACCATGCGGGGAGAGGCTTGGCACCGATGGACCGAATCCGGTAG
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| Protein seq | MVKVIFNFFEDRALVLNDKNVVKLLGCCLETEVPLLVYEFISNGSLDDHLHVDGPISLSWVDRIRIALEVSRALVYLHSAATTPIFHRDIKASNVLLDDNLTAKISDFGASRYILIDQTGVTTVVQGTIGYLDPMYYYTGRLTNKSDVFSFGVLLIELLTRKKPIYRTDRGDSLVPHFASLLEEGKLVEIIDPQVKEEENGEVEEVATLAAMCTKLNGQDRPTMREVEIRLENLRAKTKHAPYNKEPSRYEVSRVAGHCISARGDIEEVLISRHSMEDEMLSLESEDIDDAGYEVAIYGKTVKGKQGSATMDHAGRGLAPMDRIR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g16824 | SBH | 1.396188 | 1.701065 | 1.434122 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0013140 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0013270 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0013180 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0012940 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0012660 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0242800 | SBH | 0 | 6.289524 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0012850 | SBH | 0.0 | 0.136741 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0263100 | SBH | 0 | 0.2563965 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0012780 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0013120 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0012950 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0012910 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0013090 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G012790 | SBH | 0.0 | 0.393469 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0012450 | RBH | 0.0 | 0.0 | 0.0 |
