Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0024450 | OGI:11081810 | 10/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:30379728-30380051 | ||||||||
| Gene Symbol | NAC130, ONAC130 | ||||||||||
| DNA seq | tcagtttagagattgATTacataccatgagaccaacgttttgccgtgagcggcacaactgcgccaaaagctcctcagacccattggcggcgttgtcaagtgcccaaaactcgtcgatcttccacttggttttgcgccccgacggctcgcggccgcggtagaacaacatgctcttcttcaatccgacgggatgtctatctgcagagtacacgaaactggctgtgcctgttgcggtcttccaataccctgacggtgtgctccggtccatcatccatccctcatgctggcggaagtagaaccaccgctccccagccccggcacccat |
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| CDS seq | atgggtgccggggctggggagcggtggttctacttccgccagcatgagggatggatgatggaccggagcacaccgtcagggtattggaagaccgcaacaggcacagccagtttcgtgtactctgcagatagacatcccgtcggattgaagaagagcatgttgttctaccgcggccgcgagccgtcggggcgcaaaaccaagtggaagatcgacgagttttgggcacttgacaacgccgccaatgggtctgaggagcttttggcgcagttgtgccgctcacggcaaaacgttggtctcatggtatgtAATcaatctctaaactga |
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| Protein seq | MGAGAGERWFYFRQHEGWMMDRSTPSGYWKTATGTASFVYSADRHPVGLKKSMLFYRGREPSGRKTKWKIDEFWALDNAANGSEELLAQLCRSRQNVGLMVCNQSLN |
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| Function | NAC domain-containing protein 90 [UniProtKB/Swiss-Prot:Q9FMR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0024450 | OsLima_11g0024450.01 | Chr11 | 30379728 | 30380051 | - | NAM | ||
| CDS seq | atgggtgccggggctggggagcggtggttctacttccgccagcatgagggatggatgatggaccggagcacaccgtcagggtattggaagaccgcaacaggcacagccagtttcgtgtactctgcagatagacatcccgtcggattgaagaagagcatgttgttctaccgcggccgcgagccgtcggggcgcaaaaccaagtggaagatcgacgagttttgggcacttgacaacgccgccaatgggtctgaggagcttttggcgcagttgtgccgctcacggcaaaacgttggtctcatggtatgtAATcaatctctaaactga
More
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| Protein seq | MGAGAGERWFYFRQHEGWMMDRSTPSGYWKTATGTASFVYSADRHPVGLKKSMLFYRGREPSGRKTKWKIDEFWALDNAANGSEELLAQLCRSRQNVGLMVCNQSLN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45950 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024400 | RBH | 0.000000 | 29.162773 | 0.189769 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024240 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023840 | RBH | 0.0 | 43.446110 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023630 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024180 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0439700 | RBH | 0.012417 | 6.2325165 | 0.042705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024550 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0437200 | SBH | 0.165827 | 7.2080135 | 0.327764 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0003720 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023780 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023670 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024050 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024060 | SBH | 0.0 | 13.188508 | 0.285753 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024270 | SBH | 0.0 | 10.566753 | 0.0 |
