Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0002430 | OGI:11006100 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:1722822-1724462 | ||||||||
| Gene Symbol | CYP94D5A, OsCYP94D5a, CYP94D5B, OsCYP94D5b | ||||||||||
| DNA seq | atataatgccagatgaacactcctcttgcctccatccacaggtcaacctgcaggcaacccagcttgctaccaagtcaatcaatggcaatggacacttactactattccatgctcttcgtcctccctccgatactctacatgtcctaccacctcaccagaatcctcgccgacaagaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgttcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccggagatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccggccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgccattggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctggcagcgcaagaacgccagctacgagttcagcaaccgctccctgcgcaggttcgtcgtcgacgtcgtgcaggccgagatcgccgaccgcttcctcccgctgctccgccgcgccgccggtgatggtggtggcgatggcgatgtcgtcgtcctcgacttgcaggaggtgctccagcgattcgggtttgataccatctgtatggtggcgttcgggcacgacccgcggtgcctcgccgacggcggggtcatggaggatgccaggtcggagttcatgcacaccttcggcgaggcgcaggacctcgtcgtcggccgcttcttcgatcccatcgaggtctcctggaagatcaagaagtggctcaacgtcggcaccgagcgccgcctcaggaaggccatcgccgacgtccacgcctttgccatggacatcgtccgcgcccggcgccagagcgcgtccgtgaacgacagagacgacgtcctgtcgaggttcgtggcgagcgacgagcacagcgacgaggtcctccgcgacatcgtcctcagcttcctcatcgccggccgagagacgacggcgtcggggctgagctggttcttctggctcttgtcgtcccggcccgacgtcgcggcgcgcatcgccgacgaggtccgcgcggtgagggaggcgaccggcacgcgccccggcgagccgttccggttcgacgcgctccgggagatgcactacctccacgccgcgctcaccgagtcgatgcggctgtacccgccggcgccgatcgactcgcagtcgtgcgcggcggacgacacgctccccgacggcacgctcctccgcgccggctggtctgtgacgtacagcgcgtacgccatggggcgtctcgccgccatctggggcgaggactgcttggagtacaggccggagcggtggctcggcgacgacggcgcgttccagccggcgagcccgttccggttcacggtgttccacgcggggccgaggatgtgcctcgggaaggagatggcgtacgtgcagatgaagtccatagttgcaaacgtgcttgaggagttcgaggtcgacgtggtcaaggaggtcgccggcggcggcgtgccggagcacgtgctctcggtgacgctgaggatgaagggtggactacctgtgaagattaggagaaagactgaagcttactag
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| CDS seq | atgaacactcctcttgcctccatccacaggtcaacctgcaggcaacccagcttgctaccaagtcaatcaatggcaatggacacttactactattccatgctcttcgtcctccctccgatactctacatgtcctaccacctcaccagaatcctcgccgacaagaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgttcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccggagatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccggccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgccattggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctggcagcgcaagaacgccagctacgagttcagcaaccgctccctgcgcaggttcgtcgtcgacgtcgtgcaggccgagatcgccgaccgcttcctcccgctgctccgccgcgccgccggtgatggtggtggcgatggcgatgtcgtcgtcctcgacttgcaggaggtgctccagcgattcgggtttgataccatctgtatggtggcgttcgggcacgacccgcggtgcctcgccgacggcggggtcatggaggatgccaggtcggagttcatgcacaccttcggcgaggcgcaggacctcgtcgtcggccgcttcttcgatcccatcgaggtctcctggaagatcaagaagtggctcaacgtcggcaccgagcgccgcctcaggaaggccatcgccgacgtccacgcctttgccatggacatcgtccgcgcccggcgccagagcgcgtccgtgaacgacagagacgacgtcctgtcgaggttcgtggcgagcgacgagcacagcgacgaggtcctccgcgacatcgtcctcagcttcctcatcgccggccgagagacgacggcgtcggggctgagctggttcttctggctcttgtcgtcccggcccgacgtcgcggcgcgcatcgccgacgaggtccgcgcggtgagggaggcgaccggcacgcgccccggcgagccgttccggttcgacgcgctccgggagatgcactacctccacgccgcgctcaccgagtcgatgcggctgtacccgccggcgccgatcgactcgcagtcgtgcgcggcggacgacacgctccccgacggcacgctcctccgcgccggctggtctgtgacgtacagcgcgtacgccatggggcgtctcgccgccatctggggcgaggactgcttggagtacaggccggagcggtggctcggcgacgacggcgcgttccagccggcgagcccgttccggttcacggtgttccacgcggggccgaggatgtgcctcgggaaggagatggcgtacgtgcagatgaagtccatagttgcaaacgtgcttgaggagttcgaggtcgacgtggtcaaggaggtcgccggcggcggcgtgccggagcacgtgctctcggtgacgctgaggatgaagggtggactacctgtgaagattaggagaaagactgaagcttactag
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| Protein seq | MNTPLASIHRSTCRQPSLLPSQSMAMDTYYYSMLFVLPPILYMSYHLTRILADKKKPTTHGLKAHPLLGHLPAFVNNSHRFLDWTTELIVGSPEMRMGFWIPGMRTGIITGNPADVEHILRTNFANYPKGEHAIGMLEDFLGHGLFNSDGEQWLWQRKNASYEFSNRSLRRFVVDVVQAEIADRFLPLLRRAAGDGGGDGDVVVLDLQEVLQRFGFDTICMVAFGHDPRCLADGGVMEDARSEFMHTFGEAQDLVVGRFFDPIEVSWKIKKWLNVGTERRLRKAIADVHAFAMDIVRARRQSASVNDRDDVLSRFVASDEHSDEVLRDIVLSFLIAGRETTASGLSWFFWLLSSRPDVAARIADEVRAVREATGTRPGEPFRFDALREMHYLHAALTESMRLYPPAPIDSQSCAADDTLPDGTLLRAGWSVTYSAYAMGRLAAIWGEDCLEYRPERWLGDDGAFQPASPFRFTVFHAGPRMCLGKEMAYVQMKSIVANVLEEFEVDVVKEVAGGGVPEHVLSVTLRMKGGLPVKIRRKTEAY |
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| Function | Cytochrome P450 94A1 [UniProtKB/Swiss-Prot:O81117] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0002430 | OsLima_11g0002430.01 | Chr11 | 1722822 | 1724462 | + | NAM | ||
| CDS seq | atgaacactcctcttgcctccatccacaggtcaacctgcaggcaacccagcttgctaccaagtcaatcaatggcaatggacacttactactattccatgctcttcgtcctccctccgatactctacatgtcctaccacctcaccagaatcctcgccgacaagaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgttcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccggagatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccggccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgccattggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggctctggcagcgcaagaacgccagctacgagttcagcaaccgctccctgcgcaggttcgtcgtcgacgtcgtgcaggccgagatcgccgaccgcttcctcccgctgctccgccgcgccgccggtgatggtggtggcgatggcgatgtcgtcgtcctcgacttgcaggaggtgctccagcgattcgggtttgataccatctgtatggtggcgttcgggcacgacccgcggtgcctcgccgacggcggggtcatggaggatgccaggtcggagttcatgcacaccttcggcgaggcgcaggacctcgtcgtcggccgcttcttcgatcccatcgaggtctcctggaagatcaagaagtggctcaacgtcggcaccgagcgccgcctcaggaaggccatcgccgacgtccacgcctttgccatggacatcgtccgcgcccggcgccagagcgcgtccgtgaacgacagagacgacgtcctgtcgaggttcgtggcgagcgacgagcacagcgacgaggtcctccgcgacatcgtcctcagcttcctcatcgccggccgagagacgacggcgtcggggctgagctggttcttctggctcttgtcgtcccggcccgacgtcgcggcgcgcatcgccgacgaggtccgcgcggtgagggaggcgaccggcacgcgccccggcgagccgttccggttcgacgcgctccgggagatgcactacctccacgccgcgctcaccgagtcgatgcggctgtacccgccggcgccgatcgactcgcagtcgtgcgcggcggacgacacgctccccgacggcacgctcctccgcgccggctggtctgtgacgtacagcgcgtacgccatggggcgtctcgccgccatctggggcgaggactgcttggagtacaggccggagcggtggctcggcgacgacggcgcgttccagccggcgagcccgttccggttcacggtgttccacgcggggccgaggatgtgcctcgggaaggagatggcgtacgtgcagatgaagtccatagttgcaaacgtgcttgaggagttcgaggtcgacgtggtcaaggaggtcgccggcggcggcgtgccggagcacgtgctctcggtgacgctgaggatgaagggtggactacctgtgaagattaggagaaagactgaagcttactag
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| Protein seq | MNTPLASIHRSTCRQPSLLPSQSMAMDTYYYSMLFVLPPILYMSYHLTRILADKKKPTTHGLKAHPLLGHLPAFVNNSHRFLDWTTELIVGSPEMRMGFWIPGMRTGIITGNPADVEHILRTNFANYPKGEHAIGMLEDFLGHGLFNSDGEQWLWQRKNASYEFSNRSLRRFVVDVVQAEIADRFLPLLRRAAGDGGGDGDVVVLDLQEVLQRFGFDTICMVAFGHDPRCLADGGVMEDARSEFMHTFGEAQDLVVGRFFDPIEVSWKIKKWLNVGTERRLRKAIADVHAFAMDIVRARRQSASVNDRDDVLSRFVASDEHSDEVLRDIVLSFLIAGRETTASGLSWFFWLLSSRPDVAARIADEVRAVREATGTRPGEPFRFDALREMHYLHAALTESMRLYPPAPIDSQSCAADDTLPDGTLLRAGWSVTYSAYAMGRLAAIWGEDCLEYRPERWLGDDGAFQPASPFRFTVFHAGPRMCLGKEMAYVQMKSIVANVLEEFEVDVVKEVAGGGVPEHVLSVTLRMKGGLPVKIRRKTEAY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.073801 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0483000 | SBH | 0.318664 | 0.662369 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g04290 | RBH | 0.137380 | 0.108211 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0483000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002540 | RBH | 0.0 | 0.0 | 0.249546 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0002590 | RBH | 0.0 | 0.655335 | 0.097209 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002560 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002510 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0002490 | RBH | 0.318963 | 2.104262 | 0.317151 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0034200 | RBH | 0.1273115 | 0.8750795 | 0.243094 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0002550 | RBH | 0.0 | 0.0 | 0.037552 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0032700 | SBH | 1.6913125 | 2.225603 | 3.299956 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0002390 | RBH | 0.022344 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0002570 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0002570 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002480 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002570 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G002520 | RBH | 0.000000 | 0.000000 | 0.216236 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0002500 | RBH | 0.0 | 0.000000 | 0.000000 |
