Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0483000 | OGI:11049860 | 15/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:16985426-16986181 | ||||||||
| Gene Symbol | HAN1, OsHAN1, OsCYP94B4, CYP94B4 | ||||||||||
| DNA seq | ATCCCAACAGTCCATACCTCCATCTCCCCCCATGCTTCGCCTTCGCCTTCGTCTTCGTCTACCTCATCTTCGAAATTCTAACACCAAAATTAATTTCATTATTAGTAATATAGTATATTAGAGTAGTAGAGGGATCGAGAGAGAGGAGAAGCATGATTTGCTTCATGGCGTGGTTCGTCGCGGCTTGGAGCTGCCTCCTTGTGGTGGTGATGGTGAGCTCGATGAGGCTTAGTAGGTCAGCTTCATCGTCCTGTGGATCTTCTTGCGGCCATGGCGGGTGGGGGCCGAGGAGCTACCCGGTGATCGGGTGCCTGGTGGCGTTCTACCGCAACCGGCGGCGGCTGCTGGACTGGTACACGGAGATGCTGGCGGCGTCGCCGTCGCAGACGATCGTCGTTGACCGGCTGGGCGCGCGGCGCACGGTGGTGACGGCGAACCCGGCGAACGTCGAGCACATCCTCCGGGCGAGGTTCGCCAACTACCCCAAGGGGAAGCCGTTCACCGACGTGCTCGGCGACCTGCTCGGCATGGGCATCTTCAACGTCGACGGCGAGCTCTGGCACGCCCAGCGCAAGCTCGTCAGCCACGAGTTCTCCGCGCGCGCGCTCCGGGACCTCGAGGTCACCGTGCTCGAGGCCGAGGCGCGGGACCGCCTCGTCCCGGCGCTCGCCGCGGCGTCGCGCGGCGGCGGGGTGGTGGACATGCAGGACGTGCTCCGGCGGTTCGCGTTCGACGTCATCTGCCGGGTCTCGCTCG
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| CDS seq | ATGATTTGCTTCATGGCGTGGTTCGTCGCGGCTTGGAGCTGCCTCCTTGTGGTGGTGATGGTGAGCTCGATGAGGCTTAGTAGGTCAGCTTCATCGTCCTGTGGATCTTCTTGCGGCCATGGCGGGTGGGGGCCGAGGAGCTACCCGGTGATCGGGTGCCTGGTGGCGTTCTACCGCAACCGGCGGCGGCTGCTGGACTGGTACACGGAGATGCTGGCGGCGTCGCCGTCGCAGACGATCGTCGTTGACCGGCTGGGCGCGCGGCGCACGGTGGTGACGGCGAACCCGGCGAACGTCGAGCACATCCTCCGGGCGAGGTTCGCCAACTACCCCAAGGGGAAGCCGTTCACCGACGTGCTCGGCGACCTGCTCGGCATGGGCATCTTCAACGTCGACGGCGAGCTCTGGCACGCCCAGCGCAAGCTCGTCAGCCACGAGTTCTCCGCGCGCGCGCTCCGGGACCTCGAGGTCACCGTGCTCGAGGCCGAGGCGCGGGACCGCCTCGTCCCGGCGCTCGCCGCGGCGTCGCGCGGCGGCGGGGTGGTGGACATGCAGGACGTGCTCCGGCGGTTCGCGTTCGACGTCATCTGCCGGGTCTCGCTCG
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| Protein seq | MICFMAWFVAAWSCLLVVVMVSSMRLSRSASSSCGSSCGHGGWGPRSYPVIGCLVAFYRNRRRLLDWYTEMLAASPSQTIVVDRLGARRTVVTANPANVEHILRARFANYPKGKPFTDVLGDLLGMGIFNVDGELWHAQRKLVSHEFSARALRDLEVTVLEAEARDRLVPALAAASRGGGVVDMQDVLRRFAFDVICRVSL |
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| Function | Cytochrome P450 94B3 [UniProtKB/Swiss-Prot:Q9SMP5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0483000 | OsNip_11t0483000-00 | Chr11 | 16985426 | 16986181 | + | RAP2018-11-26 | ||
| CDS seq | ATGATTTGCTTCATGGCGTGGTTCGTCGCGGCTTGGAGCTGCCTCCTTGTGGTGGTGATGGTGAGCTCGATGAGGCTTAGTAGGTCAGCTTCATCGTCCTGTGGATCTTCTTGCGGCCATGGCGGGTGGGGGCCGAGGAGCTACCCGGTGATCGGGTGCCTGGTGGCGTTCTACCGCAACCGGCGGCGGCTGCTGGACTGGTACACGGAGATGCTGGCGGCGTCGCCGTCGCAGACGATCGTCGTTGACCGGCTGGGCGCGCGGCGCACGGTGGTGACGGCGAACCCGGCGAACGTCGAGCACATCCTCCGGGCGAGGTTCGCCAACTACCCCAAGGGGAAGCCGTTCACCGACGTGCTCGGCGACCTGCTCGGCATGGGCATCTTCAACGTCGACGGCGAGCTCTGGCACGCCCAGCGCAAGCTCGTCAGCCACGAGTTCTCCGCGCGCGCGCTCCGGGACCTCGAGGTCACCGTGCTCGAGGCCGAGGCGCGGGACCGCCTCGTCCCGGCGCTCGCCGCGGCGTCGCGCGGCGGCGGGGTGGTGGACATGCAGGACGTGCTCCGGCGGTTCGCGTTCGACGTCATCTGCCGGGTCTCGCTCG
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| Protein seq | MICFMAWFVAAWSCLLVVVMVSSMRLSRSASSSCGSSCGHGGWGPRSYPVIGCLVAFYRNRRRLLDWYTEMLAASPSQTIVVDRLGARRTVVTANPANVEHILRARFANYPKGKPFTDVLGDLLGMGIFNVDGELWHAQRKLVSHEFSARALRDLEVTVLEAEARDRLVPALAAASRGGGVVDMQDVLRRFAFDVICRVSL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.318664 | 0.662369 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g29290 | RBH | 0.652373 | 0.131811 | 0.814844 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0483000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0014030 | RBH | 0.085484 | 3.334449 | 0.730032 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0013990 | RBH | 0.0 | 0.983861 | 0.901959 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0013950 | RBH | 0.179058 | 4.701839 | 1.539884 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0013770 | RBH | 0.0 | 0.125657 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0014050 | RBH | 0.0 | 7.319066 | 1.908557 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0261700 | RBH | 1.6929815 | 9.2082055 | 0.2008805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0273800 | RBH | 3.557256 | 14.3745595 | 0.3736705 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0014120 | RBH | 0.056887 | 0.027873 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0014170 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0013820 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0013660 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0013960 | RBH | 0.089686 | 6.537907 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G013780 | RBH | 0.0 | 1.206034 | 0.232869 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0014000 | RBH | 0.0 | 5.318751 | 2.028674 |
