Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0002050 | OGI:11005240 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:1458207-1469033 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgaggtctcttcttgcattctttgcagcaagcatattgttggcttcaacgacaactactgttcatggtgtacatatcgatcccaatgacattatcaagaccatagaggtaagaatttctacattatgttaatcttctttatttaggattggtaaggttactacttggcagatatccatgcattagctatatatcatagtataaatatgtttaatttgttaatcacaagatgaattctcaaatctaatattcctcatcttcatatatactcgatctggttgaattcatgaatttatatatagctgaacaactgaggtcattttggtccaggcagtaatttttccagtgatcattggccttaccccccaaaaaagtttcatgtgctaattaagtctcactttggtttctaattgacagagcgagtgcggtgatattattgactgcgtggacatatacaagcaaccaagcctcaagaatccattgctcaaagatcataaaatcctggtgctgtacatacgtctgaacattttcattgtcgattactactttctctatttcacgttataattataactacaaaacatttagattctgaatagattcatgtatatgtttcatatatgtacccaaatatatatggatgttagtaaatttaggcgagagatggaaagaccaaaatcaaaatgttttaaatataaaacatatagaatattataatagttttttaaggaatgcaaccatttatacatgtatgtatgcaattgttagaaagaaaataatactacctccgtattttaatatatgatgccattgactgttttttttccaaattttgaccattcgtcttattcaaaaaatttatataattatcatttattttattgtgacttgatttatcatcaaatgtttttaaacatgacataaatattttcatatttacacaaaaattttgaataaaatgaatggtcaaacattggtcgaaaagtcaacgacgtcatttattaaaacacggagggagtagtaaattaaggagagaattaagatcaaagaactaattgcagtttaagagctactagtactgatgtatgtgatgaatatatattgttcagtttaaaccaagcgtggatcgtcccaagatagttgagaagatggtggtgttgggaggaaacaactcgttcaaattcgcggagcaggcatggcatcgaagcggtaggtgccctgaaggaagcatcccaatccgaaggacacctgctactgctactgcagatgcaaaccgaactctccatttcttctcctcctatggccgacctcctccaaacagtattcatgatgaagctggcaataataattataatctagaagtaagtaataatactactatcctccctccgtcagaaaaaagaaaactcaatccgaccccttctaagatcatgaatttggataaaggtaggccagatttattatattagaaaaggtcaaatcttcttctaggttgatttttttaaaggaaggttgattttttttgacgaatggagtatagcactagtgattatattaatttaatcatcaaattaaacatatataaggtgatggattagtatgatgtgtgcgcagattgcagcggcatatggagtgaatgggccatatcacggtgcatcggtgtggcttcctatatggaaagttggggtgggaccctctgaattctccaagagctacctcgccatcgccagtccaacagtctgggaatttacgccaatcccaggcaaagatccacccaacatcgacaactaaattgctctcggaatcgccgtacgtgcccgttaccatttctatatatttatttttgtatgtgtatatgttaccggccagttatcacttttatatgtatgtataccatatgtgtcacgtacataccaacgtatgttacgttaatttgttgtttatatatgcaggtttaccctcaattttttggtgacgatcttcctcggctctacatatactccactgtaaagtgtctctcctaccttataacgaattgcatacatactgttttcattagaagtacaaaaattatttggtcacttttatttaatttgaatatattctacagaaaattgaatgtttgaattaaataccaaaaataaatattcagttgtttcttgacatgtaggcccctatgaatctcctaattcttagtacgctaattagatttattattattattattattactattattattactactttcctgtgatgtattaatagaaggatcacataattcttttattcaatattgcacatgatggataatcaactgtcaggatcagtaggagtcctctactcctcttacctgcatagtggtaagatagttagatagagcactagctagatttaaaacagctagctaattttcttaaaactctttttttttctttaagaagatgacacaaattaattaggtgcatgctagttaaagttggtgatgtcagctggtatgtacagcacagtctacagtgctctatagctactcactggtgtaattaatgcatgggatatatatatgcagaacgatggtggcgtgaaattaaagtgcttcaaccttgagtgttctttcgtccagaccagcaaaaagcacgccattggtgctaaatacgacaagttttccacggttggtggaaccacctacttcacccacgtcgtaatatacagggtgcataggtcatctgccctaaaacatactccctccgtattataatatatatgacgtcattgattttttattatcgtttgatcattcattttatttaaaaaattatgtaatttatcatttattttattataacctgatttatcattaaatgttttttaagaatgacataaatatttttatatttatataaaaattttgaataagacaaatggttaaacgttgtttaaaaattcaacggcgcgtcgtacattaaaatacatagggagtatataatatttttttgttgcattgcgtataaacatcactcagctgctagctagttagaaatactttttttaagtatctagaaatatacttatatatttttaaggatgaagaagagaatggtacgcggcacgtatatatgtattgcaatgattatgggatacatatatgtaataaaaggagattgattaattatatactagtaattaatatatccatgctaatgctatgacgatatttgacaatataccttaatgcattttgaataaaattttctttataagaaaattatttgtcatattataatgtcctaaataattatatactttgatgcttatctccatatgaaacacatgcgatattatcttgttaaactgtaagtctatatatataatcccaaaaatcacaatttagagatcacatctcaattttcaaccagcaaacataacaataaattacatgttccacacattttattcaataaaatcaactatagaaatcacaaatgactaacacttgtgtaggaagacatagagctagcatgagtaatctatgctatatattgggaaagggatagctaggaggcttctcaatccgtatcgcaggacgtaccattaattttgttttagcaacagaacttgttttagtattcagaaattaaattgattaattatatataagagtggatgatgcaggatgatgggccggcggtgtggtgggtgtcgctgatggatgagccgatcggctacttccacgagagcgcgttcgcggcgcccttcatcgagagcttccacaacgagatgggagggcatgtgctggacaggaggctgggagggcggcacacgctcaccccgatgggcagtggcatgtacccctccgatggcctccagaacgcagcctgcatccatgcctacctcgccatcgcctacaccggcgccgaccaagtcgacgaccccgtcaacaccatcgtcacccaccccaagtgctacgacgttaaggatgatggccccgacctctatcgccccggcatcaatgtcgcctttggtggccctggtggatacgactgtgatcacaattagtaataattaattaactacgtcatctctctttcattatgtaacatgaatgaataattcaggaaatgtggggtagtgtttgaaaaactaatgaaaaatcaagtgttgttttgggaagatgttcattacacactgacaaaagaagtaaaaaatatacattatttttagagtttttgcagttatatatatgtttttgaaagaattatgaaaatatacacgtaccgtggtacgaggacgcgtgactaattgtttggcgcggtaggggaccaacggctaggacagtcttcccaatcggctaccacgtgccacggcgcgggattgtcccaaccatcggtccggcaccttcgcgccacgccgaataattggtcgtgcgttcacacgtaatggtacgtgtatatatttttctatttttttttcaagagtatgtatataactgaaaaagccaaaaacaatgtataattttaatttcttttctctgacgtacaccaagtaatggtccatagctatccggcgaacccgccatggcggactggccgatggcagagccgaggcgaatcagcggcagacacgagaagctccccaatacgctctccttttccagtttccccaactctagctagaagccaatcagaagcgccagccaggggaaagcagagagtcgtcgatccctctcgtcgccgttgttctcgtcggcatcacctacattattgtccgtacgtgtgcgttcgacggccttcctccatccggtagagtttgcttcctccaccttgaccacatgatgttcgacgaaatgcctagcaaggttaaggttctgtcactttcttcttccaaaactgattgtcatcctgcgtttctttgctattttgcacaaccttgtggaacaataataaaagaaaattaattagtcctccatatttggttgtttctacagatgacaagttagtttaccttgttggtattacagataacaatgcatccaatttctttgttgcagattgacaaatcgacattgattcacatatccatttttgcatgccgatggtgttttgtgagctctaagtaaggcctgattctgaatatacaactgaatggcatctatagcgtttggtcaaagaaatctgcgtgtctttcccctcagaaggcacatatgggatgcggtgtttcagcatggtccttataattgcaccatacagaggaggtggaaaaaaccagttgattcagcaagaactcgacaggaaggcagaacaagagatcataaactggacaagctgatgattcaactgaagaacctgaggctagctttggatttacacgagttgatatctcagcagaggaatggctttgcatctctccaactcctctccaggtggagacatgaggttggcctaaatattgagattggcgctttccttaagaaatatccccacattttttacatttatgtgcacccagtcaaaaggaatgaatgctgtaaggtcaccccaaaaatggctgaattgattgcagaagaagatgctgtcatcagggaaaatgagcctgctattgttaagcggctgaagaagctcctcatgctaatgaaagatggaactctgaatatgcatgcattgtggctcataagaagggaacttggcctgcctgatgactataggtgctctatactaacaaaccatcagtctgatttttctctaggttcccctgatactctgacattggtcactagggatgaaagtctagctgtagctgatgttgaagaatgaagagcgaaggaatatacagaaaaatggttagctgaatctgagacaaaatatgtttttcctataaacttgccagccggctttaagatcgagaatggttttagggaaaagcttgggaactggcagaggcttccctatactaaggcttatgataagaatgatttgcatccaatccacaatgtcgggcggctcgagaaacgtattgttggcattcttcatgaacttttaagcttgacagtagaaaagatgataccacttgagaggttgtcccacttcagaagaccttttggtatggaggtaaacctgcgggagcttattcttaagcaccttggcattttctacatctcaaccaaaggaagcacacagcatgtccttcttagagagagttacagtaagggatgcctggttgatccaaaccctgtctataatgtaagaaggaaaatgctaggtcttattttgtcaggatgtcgtggcattgatgaaatggacagtccatttcggtttactgaggaacacaatcaggaaagtagtaacgagttatagaatcacatgtgccagacaaacactgaaggccttgttggaagctcaaagtggcatttgtcagagaattagcctaatgatcaggaaggcaatttatatgagcattcttataatgcttatatgtgtatcatttctacaaggatatacttgggaagttcaagaatcatatggcttagaagaccgcaaaccattttcttaatctcttgaccatctatggtgtttgcaactcttgacacgtcggtggtagagtgtcatctggtgaagatcttagaagcttgtgcaagctaagaaaatcagctgtcatgagcaacggcactgcacctagagaagaaggaatgcatcatagtgcttggcagctataacaatgcagtggcactcgagtagggtcagttgctgaaccccggagtcctccatagattattagttttgacagtactacactgatttattttattgcagagatagctccaatgaagatctaggggcagtcatttatgctttggactgatctattgtaaggacaataatcgttttctagggaaaggtttttcaaagagaaggagctctgcatcatcgtcttcgagcagttctttctttgaattacgagcaagctgctgtagaatacagcaaggaagttcgtaagagacggggcataatctggaagagacaacagatgccaacagagaggtcagaagatatcgcacttcaccctgtctgagaccacagctatcatcttccccaaagcaaacttgttgaatgaaaggtgctgttgataagaactggcaatttcttccatacacaaatctctactcagctcgtgttatctacagttacatcttgatgttaaatttgcatggttgttttcattttgttggtcagtgaattatatgtcaataatggtatcttgatgtcaaattcgcatgattgttttcgttttgttggtcagtgaatgatatgccagtaatagtaacaatgcagttgtttggaatatgatgcaatgattattcagaagtggattatgaatcatgtttaatacctttctagcattcatattttttggaatatgatgcaatgaatcatgtttattcagaagtggattatgaatttggacttcccaaaacttgcatcacactcactaagttagattgttccttccaagctaatgtaattgtagtattgtttgctcccatatgcacgaacctggacctgaagaatccaatccagagaatgatacatggataggataatcgtaacaattatctagacagtgatgttgcattagaagtttagaactctcaagttactgaccctgttcaaatatagtgactgaccggaactgatccatatatttttttgaccattctagcaagttcaacgaagagataagagtcatcctgaagcatcatcattcggctgtatattcatgcatgggagggacctactgaataccgattttgatcacttgtttcaagcatatccaaatgttctctttgcagataatttattcaaggtgcatcttagggatgtttgttttggctatatattcaaggtaaatgtcattttctaatagaaaaaaaacccaaccagaagttctcctctgcaggataacttcaaaaaagtcaaaaactgcagagaagtattccaaaacgccacaccaaccgcactgtgaatttctgactacatcagaactgtcattcaagatacattgcaccacatgcaacaaagtagtagtcaagctatgctcatccaatctctgaagctcagaccatctctccaagactgcaaccatggatgctccatttctttctacttcccttgctgttcttgccaccctctttttgcttgctctaccattgagtgctgcaactcatgatattctaccactgaaatcctctctctttgttgaagagtatgaaaccaacatcctgcagtcatctgatggcacattctcatgtggcttctacaacatcactaacgcctacaacatcactagcgccttcaccttctcaatttggtactccaattcagctgacaaggccatcgtatggagcgcaaaccgtggccgtcccgtgcactcaaggagatcagagatcactctgcgcaaggatggaaacatagtcctcactgactatgacggcacagtcgtgtggcaaactgacggtaaattccctaatgttcgatatgttcaattattgaacactggtaaccttgtcttgaagaactccagtggaaacattgtttggcaaagtttcgattcaccgacagacactttgcttcctactcaacgcattctcgctacaacaaagttagtctctaccactgggttacaggttcctagtcactataccttccgtttcagcgatcagtcgatattgtcacttatatatgatgacactaatgtttccggcgtatactggccagatcctgattaccagtactatgagaataataggaacctttataacagtacaaggataggtagtcttgatgattatggagaatttttttcgagtgatcttgctaagcatcaagcccgtgttgcctctgatagaagcttggggattaaaagaaggcttaccttggattatgatggtaatcttagactctatagcttgaataactcagatggaacatggacaatttcatggattgctcaacctcaaacatgcatgactcatggtttgtgtggtccatatggaatctgccactattcacctacaccaagatgttcatgcccacctggttataagatgaggaatccgggtaactggacacaaggttgcaagcctattgtcgaaattgcatgcgatggtaaacagaatgtaacatttttgcaacttcgaaacactgatttttggggttctgatcaacaacgtattgaaaaggtaccttgggaggtgtgttggaacacttgcataagtgactgcacatgcaagggatttcaataccaagaaggaaatggtacatgctatccaaaatcttttctctttaatggaaggactttcccaacaccttttgtgcgaacgatgtatatcaaacttccttcaagtttggatgtttcaaaaaaacccattccacagtctagtatacatgattatacactaagtggacttgactgtgatcatttaaacacaataaccacagaggcagttcgtaacatgaataagattggtggggaggaaccaaaatggttctacttctatgggtttatcggtgtgtttttcattgttgaggttttcttcttcgcatttgcatggttctttgtcttgaggaaggagatgcggtcatctcaagtatggatagctgaggaaggctacagggtgatgactagtcatttccgaatgtatagtcatagagagctggttaaggcaactgaaaggtttaaacatgagcttggatggggaggttcaggagttgtctataagggaatattggatgacgatcgagcagtggtcataaaaaagttggaaaatgtcacgcaaaatagggaggagtttcaggatgagttgcatgttatttcaagaatcaaccatatgaacctagtaagaatatatggtttttgctcagaaagattccatagattgctggtcttagagtatgttgagaatggatcattggctaatgtactgttcaacagtaaaatcttgttagattggaagcaaaggtttaatattgctttaggcgttgcaaagggactggcttatcttcaccatgagtgcctagagtgggtcattcactgcaacctaaagccagagaacattttgctggatgagaatttagaacctaagatcactgactttgggttggcaaagctgcttagtagatctggctctaatcaaaatgtttcacgagcacgagggaccataggttacattgctccagaatggatatctggtttaccaataacagcaaaggttgatgtatatagttatggagtcgttcttcttgagctagtgtcaggaagacgagtctttgatttaatcgttggagaggataagacgaaggtgcatgagatgctcaagaagtttattaagatgatttgttatagattggacaatgagaaatcattgtggttagcagagttcgtagatttcagagtgggtgatgaattcaactacttgcaagcaaaaactttggtaaagttggctgtgtcctgcttggaggaagataggaagaaaaggccaacaatggaatcaatagtggagagcctcctttcagttgatttagctagaagttaataaaataataatgtaccgaagggagaatatttataatattggagtcccttagtggtatgttattgcgaggaccatactaattctagaagtcttcatttcctaggattactgtaatgtgtataacgttctatataattgtgtgttttacttatatctcgtaatttttccatgttatttagtaatggtctaatggaacggtggtggtatatttttctagtttttttatattggcaaagtaatgc
More
|
||||||||||
| CDS seq | atgaggtctcttcttgcattctttgcagcaagcatattgttggcttcaacgacaactactgttcatggtgtacatatcgatcccaatgacattatcaagaccatagagatagttgagaagatggtggtgttgggaggaaacaactcgttcaaattcgcggagcaggcatggcatcgaagcgcggcatatggagtgaatgggccatatcacggtgcatcggtgtggcttcctatatggaaagttggggtgggaccctctgaattctccaagagctacctcgccatcgccagtccaacagtttaccctcaattttttggtgacgatcttcctcggctctacatatactccactaacgatggtggcgtgaaattaaagtgcttcaaccttgagtgttctttcgtccagaccagcaaaaagcacgccattggtgctaaatacgacaagttttccacggatgatgggccggcggtgtggtgggtgtcgctgatggatgagccgatcggctacttccacgagagcgcgttcgcggcgcccttcatcgagagcttccacaacgagatgggagggcatgtgctggacaggaggctgggagggcggcacacgctcaccccgatgggcagtggcatgtacccctccgatggcctccagaacgcagcctgcatccatgcctacctcgccatcgcctacaccggcgccgaccaagtcgacgaccccgtcaacaccatcgtcacccaccccaagtgctacgacgttaaggatgatggccccgacctctatcgccccggcatcaatgtcgcctttggtggccctgcgtttggtcaaagaaatctgcgtgtctttcccctcagaaggcacatatgggatgcggtgtttcagcatggtccttataattgcaccatacagaggaggtggaaaaaaccagttgattcagcaagaactcgacaggaaggcagaacaagagatcataaactggacaagctgatgattcaactgaagaacctgaggctagctttggatttacacgagttgatatctcagcagaggaatggctttgcatctctccaactcctctccaggtggagacatgaggttggcctaaatattgagattggcgctttccttaagaaatatccccacattttttacatttatgtgcacccagtcaaaaggaatgaatgctgtaaggtcaccccaaaaatggctgaattgattgcagaagaagatgctgtcatcagggaaaatgagcctgctattgttaagcggctgaagaagctcctcatgctaatgaaagatggaactctgaatatgcatgcattgtggctcataagaagggaacttggcctgcctgatgactatagagcgaaggaatatacagaaaaatggttagctgaatctgagacaaaatatgtttttcctataaacttgccagccggctttaagatcgagaatggttttagggaaaagcttgggaactggcagaggcttccctatactaaggcttatgataagaatgatttgcatccaatccacaatgtcgggcggctcgagaaacgtattgttggcattcttcatgaacttttaagcttgacagtagaaaagatgataccacttgagaggttgtcccacttcagaagaccttttggtatggaggtaaacctgcgggagcttattcttaagcaccttggcattttctacatctcaaccaaaggaagcacacagcatgtccttcttagagagagttacagtaagggatgcctggttgatccaaaccctgtctataatggaaaggtttttcaaagagaaggagctctgcatcatcgtcttcgagcagttctttctttgaattacgagcaagctgctgtagaatacagcaaggaagttcgtaagagacggggcataatctggaagagacaacagatgccaacagagagctcagaccatctctccaagactgcaaccatggatgctccatttctttctacttcccttgctgttcttgccaccctctttttgcttgctctaccattgagtgctgcaactcatgatattctaccactgaaatcctctctctttgttgaagagtatgaaaccaacatcctgcagtcatctgatggcacattctcatgtggcttctacaacatcactaacgcctacaacatcactagcgccttcaccttctcaatttggtactccaattcagctgacaaggccatcgtatggagcgcaaaccgtggccgtcccgtgcactcaaggagatcagagatcactctgcgcaaggatggaaacatagtcctcactgactatgacggcacagtcgtgtggcaaactgacgatcctgattaccagtactatgagaataataggaacctttataacagtacaaggataggtagtcttgatgattatggagaatttttttcgagtgatcttgctaagcatcaagcccgtgttgcctctgatagaagcttggggattaaaagaaggcttaccttggattatgatggtaatcttagactctatagcttgaataactcagatggaacatggacaatttcatggattgctcaacctcaaacatgcatgactcatggtttgtgtggtccatatggaatctgccactattcacctacaccaagatgttcatgcccacctggttataagatgaggaatccgggtaactggacacaaggttgcaagcctattgtcgaaattgcatgcgatggtaaacagaatgtaacatttttgcaacttcgaaacactgatttttggggttctgatcaacaacgtattgaaaaggtaccttgggaggtgtgttggaacacttgcataagtgactgcacatgcaagggatttcaataccaagaaggaaatggtacatgctatccaaaatcttttctctttaatggaaggactttcccaacaccttttgtgcgaacgatgtatatcaaacttccttcaagtttggatgtttcaaaaaaacccattccacagtctagtatacatgattatacactaagtggacttgactgtgatcatttaaacacaataaccacagaggcagttcgtaacatgaataagattggtggggaggaaccaaaatggttctacttctatgggtttatcggtgtgtttttcattgttgaggttttcttcttcgcatttgcatggttctttgtcttgaggaaggagatgcggtcatctcaagtatggatagctgaggaaggctacagggtgatgactagtcatttccgaatgtatagtcatagagagctggttaaggcaactgaaaggtttaaacatgagcttggatggggaggttcaggagttgtctataagggaatattggatgacgatcgagcagtggtcataaaaaagttggaaaatgtcacgcaaaatagggaggagtttcaggatgagttgcatgttatttcaagaatcaaccatatgaacctagtaagaatatatggtttttgctcagaaagattccatagattgctggtcttagagtatgttgagaatggatcattggctaatgtactgttcaacagtaaaatcttgttagattggaagcaaaggtttaatattgctttaggcgttgcaaagggactggcttatcttcaccatgagtgcctagagtgggtcattcactgcaacctaaagccagagaacattttgctggatgagaatttagaacctaagatcactgactttgggttggcaaagctgcttagtagatctggctctaatcaaaatgtttcacgagcacgagggaccataggttacattgctccagaatggatatctggtttaccaataacagcaaaggttgatgtatatagttatggagtcgttcttcttgagctagtgtcaggaagacgagtctttgatttaatcgttggagaggataagacgaaggtgcatgagatgctcaagaagtttattaagatgatttgttatagattggacaatgagaaatcattgtggttagcagagttcgtagatttcagagtgggtgatgaattcaactacttgcaagcaaaaactttggtaaagttggctgtgtcctgcttggaggaagataggaagaaaaggccaacaatggaatcaatagtggagagcctcctttcagttgatttagctagaagttaa
More
|
||||||||||
| Protein seq | MRSLLAFFAASILLASTTTTVHGVHIDPNDIIKTIEIVEKMVVLGGNNSFKFAEQAWHRSAAYGVNGPYHGASVWLPIWKVGVGPSEFSKSYLAIASPTVYPQFFGDDLPRLYIYSTNDGGVKLKCFNLECSFVQTSKKHAIGAKYDKFSTDDGPAVWWVSLMDEPIGYFHESAFAAPFIESFHNEMGGHVLDRRLGGRHTLTPMGSGMYPSDGLQNAACIHAYLAIAYTGADQVDDPVNTIVTHPKCYDVKDDGPDLYRPGINVAFGGPAFGQRNLRVFPLRRHIWDAVFQHGPYNCTIQRRWKKPVDSARTRQEGRTRDHKLDKLMIQLKNLRLALDLHELISQQRNGFASLQLLSRWRHEVGLNIEIGAFLKKYPHIFYIYVHPVKRNECCKVTPKMAELIAEEDAVIRENEPAIVKRLKKLLMLMKDGTLNMHALWLIRRELGLPDDYRAKEYTEKWLAESETKYVFPINLPAGFKIENGFREKLGNWQRLPYTKAYDKNDLHPIHNVGRLEKRIVGILHELLSLTVEKMIPLERLSHFRRPFGMEVNLRELILKHLGIFYISTKGSTQHVLLRESYSKGCLVDPNPVYNGKVFQREGALHHRLRAVLSLNYEQAAVEYSKEVRKRRGIIWKRQQMPTESSDHLSKTATMDAPFLSTSLAVLATLFLLALPLSAATHDILPLKSSLFVEEYETNILQSSDGTFSCGFYNITNAYNITSAFTFSIWYSNSADKAIVWSANRGRPVHSRRSEITLRKDGNIVLTDYDGTVVWQTDDPDYQYYENNRNLYNSTRIGSLDDYGEFFSSDLAKHQARVASDRSLGIKRRLTLDYDGNLRLYSLNNSDGTWTISWIAQPQTCMTHGLCGPYGICHYSPTPRCSCPPGYKMRNPGNWTQGCKPIVEIACDGKQNVTFLQLRNTDFWGSDQQRIEKVPWEVCWNTCISDCTCKGFQYQEGNGTCYPKSFLFNGRTFPTPFVRTMYIKLPSSLDVSKKPIPQSSIHDYTLSGLDCDHLNTITTEAVRNMNKIGGEEPKWFYFYGFIGVFFIVEVFFFAFAWFFVLRKEMRSSQVWIAEEGYRVMTSHFRMYSHRELVKATERFKHELGWGGSGVVYKGILDDDRAVVIKKLENVTQNREEFQDELHVISRINHMNLVRIYGFCSERFHRLLVLEYVENGSLANVLFNSKILLDWKQRFNIALGVAKGLAYLHHECLEWVIHCNLKPENILLDENLEPKITDFGLAKLLSRSGSNQNVSRARGTIGYIAPEWISGLPITAKVDVYSYGVVLLELVSGRRVFDLIVGEDKTKVHEMLKKFIKMICYRLDNEKSLWLAEFVDFRVGDEFNYLQAKTLVKLAVSCLEEDRKKRPTMESIVESLLSVDLARS |
||||||||||
| Function | Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0002050 | OsLima_11g0002050.01 | Chr11 | 1458207 | 1469033 | + | NAM | ||
| CDS seq | atgaggtctcttcttgcattctttgcagcaagcatattgttggcttcaacgacaactactgttcatggtgtacatatcgatcccaatgacattatcaagaccatagagatagttgagaagatggtggtgttgggaggaaacaactcgttcaaattcgcggagcaggcatggcatcgaagcgcggcatatggagtgaatgggccatatcacggtgcatcggtgtggcttcctatatggaaagttggggtgggaccctctgaattctccaagagctacctcgccatcgccagtccaacagtttaccctcaattttttggtgacgatcttcctcggctctacatatactccactaacgatggtggcgtgaaattaaagtgcttcaaccttgagtgttctttcgtccagaccagcaaaaagcacgccattggtgctaaatacgacaagttttccacggatgatgggccggcggtgtggtgggtgtcgctgatggatgagccgatcggctacttccacgagagcgcgttcgcggcgcccttcatcgagagcttccacaacgagatgggagggcatgtgctggacaggaggctgggagggcggcacacgctcaccccgatgggcagtggcatgtacccctccgatggcctccagaacgcagcctgcatccatgcctacctcgccatcgcctacaccggcgccgaccaagtcgacgaccccgtcaacaccatcgtcacccaccccaagtgctacgacgttaaggatgatggccccgacctctatcgccccggcatcaatgtcgcctttggtggccctgcgtttggtcaaagaaatctgcgtgtctttcccctcagaaggcacatatgggatgcggtgtttcagcatggtccttataattgcaccatacagaggaggtggaaaaaaccagttgattcagcaagaactcgacaggaaggcagaacaagagatcataaactggacaagctgatgattcaactgaagaacctgaggctagctttggatttacacgagttgatatctcagcagaggaatggctttgcatctctccaactcctctccaggtggagacatgaggttggcctaaatattgagattggcgctttccttaagaaatatccccacattttttacatttatgtgcacccagtcaaaaggaatgaatgctgtaaggtcaccccaaaaatggctgaattgattgcagaagaagatgctgtcatcagggaaaatgagcctgctattgttaagcggctgaagaagctcctcatgctaatgaaagatggaactctgaatatgcatgcattgtggctcataagaagggaacttggcctgcctgatgactatagagcgaaggaatatacagaaaaatggttagctgaatctgagacaaaatatgtttttcctataaacttgccagccggctttaagatcgagaatggttttagggaaaagcttgggaactggcagaggcttccctatactaaggcttatgataagaatgatttgcatccaatccacaatgtcgggcggctcgagaaacgtattgttggcattcttcatgaacttttaagcttgacagtagaaaagatgataccacttgagaggttgtcccacttcagaagaccttttggtatggaggtaaacctgcgggagcttattcttaagcaccttggcattttctacatctcaaccaaaggaagcacacagcatgtccttcttagagagagttacagtaagggatgcctggttgatccaaaccctgtctataatggaaaggtttttcaaagagaaggagctctgcatcatcgtcttcgagcagttctttctttgaattacgagcaagctgctgtagaatacagcaaggaagttcgtaagagacggggcataatctggaagagacaacagatgccaacagagagctcagaccatctctccaagactgcaaccatggatgctccatttctttctacttcccttgctgttcttgccaccctctttttgcttgctctaccattgagtgctgcaactcatgatattctaccactgaaatcctctctctttgttgaagagtatgaaaccaacatcctgcagtcatctgatggcacattctcatgtggcttctacaacatcactaacgcctacaacatcactagcgccttcaccttctcaatttggtactccaattcagctgacaaggccatcgtatggagcgcaaaccgtggccgtcccgtgcactcaaggagatcagagatcactctgcgcaaggatggaaacatagtcctcactgactatgacggcacagtcgtgtggcaaactgacgatcctgattaccagtactatgagaataataggaacctttataacagtacaaggataggtagtcttgatgattatggagaatttttttcgagtgatcttgctaagcatcaagcccgtgttgcctctgatagaagcttggggattaaaagaaggcttaccttggattatgatggtaatcttagactctatagcttgaataactcagatggaacatggacaatttcatggattgctcaacctcaaacatgcatgactcatggtttgtgtggtccatatggaatctgccactattcacctacaccaagatgttcatgcccacctggttataagatgaggaatccgggtaactggacacaaggttgcaagcctattgtcgaaattgcatgcgatggtaaacagaatgtaacatttttgcaacttcgaaacactgatttttggggttctgatcaacaacgtattgaaaaggtaccttgggaggtgtgttggaacacttgcataagtgactgcacatgcaagggatttcaataccaagaaggaaatggtacatgctatccaaaatcttttctctttaatggaaggactttcccaacaccttttgtgcgaacgatgtatatcaaacttccttcaagtttggatgtttcaaaaaaacccattccacagtctagtatacatgattatacactaagtggacttgactgtgatcatttaaacacaataaccacagaggcagttcgtaacatgaataagattggtggggaggaaccaaaatggttctacttctatgggtttatcggtgtgtttttcattgttgaggttttcttcttcgcatttgcatggttctttgtcttgaggaaggagatgcggtcatctcaagtatggatagctgaggaaggctacagggtgatgactagtcatttccgaatgtatagtcatagagagctggttaaggcaactgaaaggtttaaacatgagcttggatggggaggttcaggagttgtctataagggaatattggatgacgatcgagcagtggtcataaaaaagttggaaaatgtcacgcaaaatagggaggagtttcaggatgagttgcatgttatttcaagaatcaaccatatgaacctagtaagaatatatggtttttgctcagaaagattccatagattgctggtcttagagtatgttgagaatggatcattggctaatgtactgttcaacagtaaaatcttgttagattggaagcaaaggtttaatattgctttaggcgttgcaaagggactggcttatcttcaccatgagtgcctagagtgggtcattcactgcaacctaaagccagagaacattttgctggatgagaatttagaacctaagatcactgactttgggttggcaaagctgcttagtagatctggctctaatcaaaatgtttcacgagcacgagggaccataggttacattgctccagaatggatatctggtttaccaataacagcaaaggttgatgtatatagttatggagtcgttcttcttgagctagtgtcaggaagacgagtctttgatttaatcgttggagaggataagacgaaggtgcatgagatgctcaagaagtttattaagatgatttgttatagattggacaatgagaaatcattgtggttagcagagttcgtagatttcagagtgggtgatgaattcaactacttgcaagcaaaaactttggtaaagttggctgtgtcctgcttggaggaagataggaagaaaaggccaacaatggaatcaatagtggagagcctcctttcagttgatttagctagaagttaa
More
|
|||||||
| Protein seq | MRSLLAFFAASILLASTTTTVHGVHIDPNDIIKTIEIVEKMVVLGGNNSFKFAEQAWHRSAAYGVNGPYHGASVWLPIWKVGVGPSEFSKSYLAIASPTVYPQFFGDDLPRLYIYSTNDGGVKLKCFNLECSFVQTSKKHAIGAKYDKFSTDDGPAVWWVSLMDEPIGYFHESAFAAPFIESFHNEMGGHVLDRRLGGRHTLTPMGSGMYPSDGLQNAACIHAYLAIAYTGADQVDDPVNTIVTHPKCYDVKDDGPDLYRPGINVAFGGPAFGQRNLRVFPLRRHIWDAVFQHGPYNCTIQRRWKKPVDSARTRQEGRTRDHKLDKLMIQLKNLRLALDLHELISQQRNGFASLQLLSRWRHEVGLNIEIGAFLKKYPHIFYIYVHPVKRNECCKVTPKMAELIAEEDAVIRENEPAIVKRLKKLLMLMKDGTLNMHALWLIRRELGLPDDYRAKEYTEKWLAESETKYVFPINLPAGFKIENGFREKLGNWQRLPYTKAYDKNDLHPIHNVGRLEKRIVGILHELLSLTVEKMIPLERLSHFRRPFGMEVNLRELILKHLGIFYISTKGSTQHVLLRESYSKGCLVDPNPVYNGKVFQREGALHHRLRAVLSLNYEQAAVEYSKEVRKRRGIIWKRQQMPTESSDHLSKTATMDAPFLSTSLAVLATLFLLALPLSAATHDILPLKSSLFVEEYETNILQSSDGTFSCGFYNITNAYNITSAFTFSIWYSNSADKAIVWSANRGRPVHSRRSEITLRKDGNIVLTDYDGTVVWQTDDPDYQYYENNRNLYNSTRIGSLDDYGEFFSSDLAKHQARVASDRSLGIKRRLTLDYDGNLRLYSLNNSDGTWTISWIAQPQTCMTHGLCGPYGICHYSPTPRCSCPPGYKMRNPGNWTQGCKPIVEIACDGKQNVTFLQLRNTDFWGSDQQRIEKVPWEVCWNTCISDCTCKGFQYQEGNGTCYPKSFLFNGRTFPTPFVRTMYIKLPSSLDVSKKPIPQSSIHDYTLSGLDCDHLNTITTEAVRNMNKIGGEEPKWFYFYGFIGVFFIVEVFFFAFAWFFVLRKEMRSSQVWIAEEGYRVMTSHFRMYSHRELVKATERFKHELGWGGSGVVYKGILDDDRAVVIKKLENVTQNREEFQDELHVISRINHMNLVRIYGFCSERFHRLLVLEYVENGSLANVLFNSKILLDWKQRFNIALGVAKGLAYLHHECLEWVIHCNLKPENILLDENLEPKITDFGLAKLLSRSGSNQNVSRARGTIGYIAPEWISGLPITAKVDVYSYGVVLLELVSGRRVFDLIVGEDKTKVHEMLKKFIKMICYRLDNEKSLWLAEFVDFRVGDEFNYLQAKTLVKLAVSCLEEDRKKRPTMESIVESLLSVDLARS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.027672 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0133001 | RBH | 0.015461 | 0.0 | 0.117650 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03810 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0133001 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002160 | RBH | 0.087627 | 3.981037 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0002190 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002180 | RBH | 0.0 | 0.527061 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002170 | RBH | 0.0 | 0.027071 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0002120 | RBH | 0.0 | 2.359208 | 0.492291 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0030300 | RBH | 0.302388 | 1.723489 | 7.834597 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0002150 | RBH | 0.0 | 0.125747 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0029100 | SBH | 0.771435 | 8.7753835 | 0.736483 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0002100 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0002200 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0002190 | RBH | 0.0 | 2.858409 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002130 | RBH | 0.0 | 0.0 | 0.052107 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002200 | RBH | 0.0 | 0.313708 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G002140 | RBH | 0.035976 | 1.290772 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0002110 | RBH | 0.0 | 8.519257 | 0.0 |
