Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0009080 | OGI:01011440 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:14809112-14820491 | ||||||||
| Gene Symbol | DLN238, OsDLN238, - | ||||||||||
| DNA seq | ttattcagtttttatagctaaatatgtgtacattacttttgcctgaggaacttgttgcctgttcccgttctggtttcttctttgtttcaatagtccctgcaaaatgtttaattgtgtatgtatgaattatataatgcactataattgcacagattcaaatattaacctcaaaaaaaatttcttacttgttctttttgtttgctgttgactttgcaacatgtgtgcaacttgcattaatggacagctttcaattgtatgatttgtccttccacaccttgtgcaatgcctttttggtacctcttttagcttctccactattccttttgtcctggcagatttttttccttttgtgtttgctaaatcagggtcctcaatTTCttcttcttcttcttcttcttcattaagtgtttcttgattcgcttgctgtccaattgcttcttctattgtactgtttccatcatgcggcagattttgatctccctcttcaagcaacaagtccagatttccatcaagcttgtccatttgatctagcatgtaaaggtatgtatcttttctctttgaggcttttgaagccatgtctgccattcttcttgatagcacattaaacctcaggaccgaactgttttcattagtagctgtattctcaattctagctgtgcattttctctcctttttcctccatctttctattatatacttatcaggtatcttgctgatttttagtgccaacatcactttgagaacatggctacataggatcccatctttggagaatttcgcacatatgcaaacaaagttttcttgagatatgtctgtcaagaccacatatctcctttgtctgaattctttttttgtcagattctcagctgcatatacctcatatgtctttccatgttgtatagctgccacttcaagatttaatgtctcccttaattcatcttgaaactttttgaaaattcccaagttgtacagctcagatgcttgcaattcaatgctatagcttgaccaaaatttctttggctttttcgttctggacacatgatctttgcagtattcagtgtcgaagattgtgtcattgattgtgtcatattctttcaaaaatgtcatcacacagtgtgtcgggcctaccccccttttgaaccttgcatttgtcccttcacttagtgctgtactatgaataaatgggcagaaatcatacttgaagtagactggtatatagttttcccttgttctccacattatctctaggtatttgatgttttgcaaactatgcttctcaatcatttgaggccacaatgtttcaaactcaacccttgtcaagcagttgtgaactatgtcatagaattcgttgtacagatctttgtttttcttgtctgaaaatgtgtttcctgtcctttctctccacttcttcataatatggaacaagcaattcctgtgctttgtatttgtgaacacttgttcaattgctgatttcattcccaagtcttggtcagttatgattgtctcaggatgttttcctcccatagctgttaggaatgtctcaaaaacccgttaggaatgtctcaaaaacccatttgaaagtttctgtagtctcatctcctAaaaatgcacatgcaaaaaggcatatgctgccatgacctgtaaccccaacaaatggagcaaatggtaggttgtacttgttagttttgtatgtggtgtcgaaactaacaaattgtcacgctcggaaattcactagtaatttccgaacttatttgtgcataaaatcctcgtccaggaatcagccgaggtacacaaactgacaattttaatatacaaatccatcttaataataacgttacatacttacaaagaaaagaaaacagcagcggaattaacggtctagcgatggcttcagctccactcccacaggcagctcaactggggtataagccaaacgtcttcccttctggatcctttaacttcaactgaggtttgatgattattgcaagaatgagcatatgacatactcaacaagccacacagcaaatatgcaagtgcacaaggattccaaaggatggcataatataggctcatttgcaaaagcagcatttagcaAAGATTTAAGATAAGTAAAACAGTAGAGTAGTTAATCATCAATTTTAATCAACACTAAACAGCACACCCATGCTGCTCAGGCCCAACCATCCTGAACAACCATACCCGGCTGTACAGATCTAACTCCAAACCAGGAGCTAAGCAAATTATTACCAGGTATAACATCCATAATTATTATGAGAGGTGTGAGACTAATTACGAAAAACATTGCTCAACTCGCCCATAACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGGCCAGAGGTGTACCACTGTACCCACAAGACACGATTCCACACATGTTGCCATGCCCCGAAATACCACCACGGCATTGCAAAGGGGGAAATCGTGACAATACCCTTTGCACAACACAACTCAAAACAGTGCACCGTTCCTGGATCATAATCACCCCCTCTATAAATATAACCAGAGGCATGGACTCCCCAGCGACCCCCACGGACTTCTCGCCGCTTCACAGTCTGGCACACTATAATGAACCATGCTATACAAAAGGTAAAGCCGTTGCCCATGCTGGCTTGTGGTTGGCACGGTAAATGTTTCACAACAGTAGCTCGCGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATATGCTCACAACCCACCTTAACCAGGTTTTAATTGTCAATTAATTAACATCACACGATTAATCATCGTGAGCTACCATTAAATATAACCATAATTAATAAGAATAATATAATATAATTTATATTTAATCCCCTTTAATTAGCTAATGTTTCTAAGCATGGCTAAGCAAACATACATGTGACATTTAGCTGAACCAATCCAATATGTAAGGTTCATGCTAATCAAATTATAACCCATAGGAAAATATaagatcatcttcggccattaattaattgggaaaggttcaccacccgatgacattcgaaaacaatgcatagttgaaataaaataatagctttaaatgggttcaacatgctcaaagggttgtttgggatctgtgtgacttgccttgagcttccgcaaacacttccgatccttcctcaacgaaaacgctctcctccggaacgtcggaactaaagcaattaaaaaaaaattaacaaaacagtacaaaaacaagcataaacagtacatgtgaatatttttaacatgtagatcttgattttagaaaaatttagcaacttgaaccacctgaaacggatctacggttatttagttatgattttctgaagatttaatctattagaaaaagggaaaaggaaaagatgatgatgtcatgatgacgtcatcaacggtggccggctcggatggcgacctcgccggagctaGggtggtcggccgggattttggaggacatctatacatagagaacgacgagacgaacccattggtactcaccaacgagccaaacgacgaacgacgatggccggcgacgaaaaagcgacggcggcggctcggcttgcacggggtggcagagctccggtgaccggcgacgaaaaaggaagggtggccgagcttcctctcaccacgacgcacccaacggtggtgacggcgaccggcgacgacgatggaagcggcggcgcgaggcggctgatcgcaggccggcgacggcagcggtttgggtggcgcggcggcggcactacgaggcacgagagagctcgggagatggggcaaacgaaagaggaggactagggggtcctatttatagccttggattgaagagatcggactcctcccgcaagaaatcgatcggggaaatcaaaaactcggttttggagataaactcgaaaacgagttcgattcggataagatactcagcgatttgctccgatttttgggggtaaagatagaggaggataagaggaatatttcccctcaactaattttgcaaacggagctcgggatgtggcggatttaacggatgaagcggtggctgcacagggcacagcacgggcggctcggctctgtccaagcttgaagatgaacagtgccagggaggcaaactagactttcggctgggcttctacttccaaggactgattaaaggagggacacaaagcagactttgggaaagagagggaaaggactgtaggctgagaggagactgggccgagagtgagaggacttttcctaattcggcccgaaaaggaaaaggtgaattttaattacttttccaattaaaataatcacttaaatgatctttgaattgttaaaaatacttccaatgctcaaataatttcaagaaaaatcctgaaaatacttggacactcaaagtacttaacaaaattataattagaccatttaatgattaatttaatatgtgggtaattactgaaatgctctttgtatgattaaaattaggaattgagcttcgaaaaatccgagaatattccagagagtataattaaccatggagaatttaataataattaaatccatccatgctttatatttaggaaattttatttcccacatttaacttcacttgtaaattaatgaacatttaatataaattctattaataatttattaaataatttAtaaatcctgaaacggaaattcaggctgtgacacaaattcaccatactcctcatatagctgagtcgatctcccatctgtccaaaacatgctcttgaccttattgttctcatctagcagcaacttgtagtagaaccctgggtcttcagcttctttttgttttagatagtccatgacttgcttcatatcaatattttttgtctctgaattaattgttgttgacacattactaacatctttcttgttatatggcagcgccgacaatcctcctcgcagaaatgacagtatcacaatcatgcttcttgtaggtatgttgcactctttcaagtcctaatcaaccttttttcttctactgtcatattcttatgcgatttaaggaattttgcttctctgtttgggcttagtacgtgattgtgttctaggttaagccttgatattttctaattttttccaacctctttcaccaccatcaaacacttgcaatttgttctgtcaatgacattggtatttctttgttcttcacctgtcttctgtttattcttttctccatcatcatttttcccatacctgtagcactggtatgtatatcttgttatctcaccattcctcttcttgcttgttgtcttgtagtggtgtgtgatgacaattgagaatccaacaagatacgcataaaagttgaagaatccatgagcctcTTTGTctgacctaaattccattccaatatcaggtatgtgtttcttgtcaatttgtactttgttcccctcttcattttccaagaagttgtcaatgtcttcttcacttatagcttctgcactgctatttgcgtttgaagtgcttgcttcatttgtacttgtaattgtaacttgttcaccacaatcttgcacattctgcccatatgttgtctcttggttctcttttgtgctttaatcatatatttctccattgtgtatctgaagaaaaagtgaacagatattagcatggcacatgtagagaaaataaattaaatcaagggatgatatttcgtctcaatggccgcaaactttttggtactgtacCTcttcagcctcatttcctgaatttaacagttgaagatcatcaatttctcctatgtttggatcatcatttccttcatttgtgatgttggtatcatccctctgcaagttgactaaatttaaattaaacaatctctttttatgttatttcaaatgtgtttttttttacttggcagtaacatacctttcttttgaagtgtataTtttttgattcatacaactcctcaatacttttttctggtccaccctgcataatttagtatttataatacttagcaattatataatactagtatattatgatatcatgatattctaaattagtttgAaaatatcacctcagtccatgtcaccatgttgctgttgttgtataacctatcaaattcttcatagctccagtgttctgtcgatatctgttcttcatacaatctatcatgttgatgtgactcttgaggagaaaacctgcttgttgtcaaaatcatggaattctgtagtgtaaaaataaaaactgttagcattgcctttcaatataaatttttcaaatttgtttagcctctattgttgaaaagtatttgctcacggtaaatgctactggtgtctgtagtagatttgtatatctctctactcgttcctgcaattttgaaagtggttagtaatctattcatttttctgtttgcagggacaaatgttttttttactgaagatgcttacttcatttgcttgcaagctgacacgtggactttgaattatctgttgcatgaggttagtgtagctcatttgtcctccctgaacctgttttatttaattacatttattcatcaaagaaataaatatattcttcatttttgtaaagcatgattgtacttactagtctttcattttcattaagaaatgtgtattgatcataaagtagttgtgctttattttcgccaatctctgatccaattgtccctgactttttgcatttttcaaaatcctgcaggtaatgagatcctggaattgaaaaagaaagcatcattagtcaaaatcagtgtaagtactgcaaaaattcacctctaattttttaggcatactaatgcattatccatagcctctaattcttcatatgatgttttttgcttaatgtattcgacctatagtccaattacagtccatatgcactgtaattacagttgtaacttctattatttctcactgtaactgaatgcaggtagttagattatttttatttatcatgctttgcatctaaattttgccatatataaatttgtgctagatgtaatttttgacaaatatcagagatggtgcataataataggtaagcatgatttttctaaccttcaactgtcttcttgatttttaattcttcagactcgattatgtctctttacatgtctttgattgtgtattccctgtaacttaagcatgtaatctatgacatcctgcatgtttgggtcattttatactatgttacaatctggaataatgttgattctatcgaaagagtactgaatttctacgagaaagttaagcatgattccagttacagtccatatgcactgtagttacagttgtagcttttgttatttttccctgtaacagaaatgcatgtataggttatatgtaatatatttttagaacatgttagaataggaagtaatgcataagtactgaaatttctgagagaagctacagtaggaattaatgctgatgttattgcgttagtactgaaatgaaaattcaacacaagtatgttcggtgcatgttttgtgtttatataagtacttaattttttatttcatttgaataggaaaatctgcatatagtttagtgacataattttgtaattatgtcattagattctttgcagattttgttgctcaaatgtagtcaaaaattagatatgttatagttcaactttagttgcatagaaagtttagaatgctagcccactataattacaatgtttcaatagtatcttgaaagattttgcatgaatactgtaataacaatgccattctaatctggaacaactttggtgttctgaattttggtttcttcagtatgttttgccataatattgctcttatctgattcttggcttttttttttcacatcttgtactgcttcatgaccagcaactggagaaaattgaagttttcatgagaaactacagtgttatgtttggtaagttatgaaagaaacatttatacttgttctttttgtacctttcatctgtattggttcttttttcttggtctgcaacttgatgtccttggttgtttctgcagctgaaattgttcctgcaaaatgttattgaaagcattacaaagcatgttagttttgtatgttctaggaaatctaactaattaacctaaatattttggttttcatatgctctaggtaatctgactatcaaacttaaatatttttgggtttcatgcagtctgcaattatagtaattataacttaaaacatacttacagttcaactcatcaccacttacagtgcagttacaatcaaaatatacctcacttacagttgtaatttctgttatttctcactgtaactagctgttggtagttagagcttgtaattgattgacattggtttattactgatttgtgtgaaaactaggacacttgtagtttgggaacccttgggactcttttttttttggttagttgtgcatgcaaaagttagaatatgtgtgcttttagtttcataaaaacatagtgagcttgtaatgcttccccttgtgttctaggtttttttccaatcactgcagtgtatggtaatcatccatttttgaattagttatAtGttttactgaaatttagctagccttcttgcatcattgcaagtgtgaggccatttcatttatgttgtctgttagtgtatgcaaccaacattaattttttttctttgtgtttgcatagattctgattgagtgcttcctggacataactcttatttgtgtactaattcttttcattcaaatagaaaaggagaacttgtgcctttatggtttattagtgctttttatttctgttgcagcgtttagatgttttctcttaggaaaataccctagaaaaatatatctcttgaggcatttgaattgctgatctaaatctgtatatgatgcccacttcttacatctagtgatttagttaagttgttttcaaatggtattttgagttatgaattttgtttatcagatgaagtcaatattttaggtttcatgtagtcttaaaacacacttacagggcaactcatctccacttatagtgtagttacagtggaaatgtacctcacttacagttgtaatttctgttctctctcactgtaactgactgttggtagttagattcctcctattttagctccaaagttgtatccattcaataactaccagttactttatgctcactatttatagtctttccctgttgatttgaccaatttagtggtggaagcttcgcattcttctcgtcaggtagcacatggctcatttgtgtgctaacttaggctaaatcactagagagcgaaactttcactttgtgcaaatatatccagttggttgctaagagcaatcccaaatttgatggttctgtatactcaaattggctgcttaaactaaaaatataaatatctcaaaacactggtaaaccaaagaccatattgatactctactttttggatagattataactctatccctgcagaagtgagattcaagtctgtttgttgttaccttaaaacacacttacagtgcaactcatcactacttatagtgcagttacagtagaaatatacctcacttacagttgtaatttctgttatttctcattgtaactggctgttggtagtttttgatattggttttatcagtgaattgtgcaaaaactgacggacttgtagtttagggaaccctaggcatcttcatttttttttatctgtgcctgatatatttgtttttgctagttattaatgtaggcctagttttgtactgttattttctattatctgtgttgctttgtgtttcatgcagcaccatctatcactagcataacttaaatatacttacacttcaactcatcaccacttacggttcagttacagtggaaatataccttagttacaaatgtaatttttattatttatttttgtaactaactgttggtagtttgatcttcattttactttctgaacttgtcacggtgtccctgtcaaggtaccatgtatatgtcgaatctagggaggctgatgccctgctagatgggcatttttatagttattatgaatttttagttcagagttaattttggcatataggactatatgatttcagttctttggttcataaagaaaatttttcgtgcacaaagaaaatccccatttttgcagatttctcgttgcatatgctagcagtttactgatgcactgttttctgcaatcctgacaggtgctgttcaggaagaagctgagtttcatggtgtcatttcaagctcaacatatgagatgtgctcctcatttgatcaaattggttgttaaaggttttatagcaaatatcactgattgaatgagcttgtaaacttgTttttttgccaatttttgtgagattccattttgttctctctgtgcacacatggcttccctctgcacacatggcacaatacaaaatttttaatgaagttctgagttagtaatggcctagttttgtactgtgcatatgcactgaagaaatattatagtgctgagttagtgacttgagactgaagtgtgcagtctgtgttcttcagatatgatgcggtttttctgaagaatgtaattcttttacttctgggtttactgctcgaatgtgaacttatgattcatcttgcttttgaaatttgaagctgtaatttttgcattttatgttcttggtaggaggtaattggattgggcgtgggattcactgaagatttcattattttgactttgatttatctgaagaaatatattgttgcttcggtgatttaagactgtaaatctgtaatatgcattttgttttcttgtttggaagatgtaaccggattgggtttggaattcactgaagatttcacatattctctatcactgatggtgtacagtgtgctatctaaaagttgtgtatcatttcctagctaattgtaaccatgaagttgcctatttaaataatgtagggtgcaagcttgttgtatttttactcagaagaatttttgagttctcaataatttgagcagatctggactttgttcttatctagaaactgaagaacatgttgactacttttgttcttgttgaaataataacagtgaggtgtgtgaggtaccaaaatgatagccctagttgtttataatctaaataaatccccaatttcatccatttctgacaaagattagaaatctgacttctgtttctttgTtttttttcaagatttaggatgaaggcaaacagtgaatgatttgtgttgaaatttccagcAaaaaggcaaggatggatgagtggtaggttcatatttacctgggagtttggtttcttttgttagtttcatcttcttggttccatcttcttgatccatctgcttgttcttctttttcttctcctcctcttcgtccatggcttggtcgcctttctgttcaatctggtctttctcttgcgtgttctttttttctcttat
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| CDS seq | atggacgaagaggaggagaagaaaaagaagaacaagcagatggatcaagaagatggaaccaagaagatgaaactaacaaaagaaaccaaactcccaggaacaatttcagctgcagaaacaaccaaggacatcaagttgcagaccaagaaaaaagaaccaatacagatgaaaggatctcattacctgcaggattttgaaaaatgcaaaaagtcagggacaattggatcagagattggcgaaaataaagcacaactactttatgatcaatacacatttcttaatgaaaatgaaagactagttcagggaggacaaatgagctacactaacctcatgcaacagataattcaaagtccacgtgtcagcttgcaagcaaatgaaaattccatgattttgacaacaagcaggttttctcctcaagagtcacatcaacatgatagattgtatgaagaacagatatcgacagaacactggagctatgaagaatttgataggttatacaacaacagcaacatggtgacatggactgagggtggaccagaaaaaagtattgaggagttgtatgaatcaaaaaAtatacacttcaaaagaaagagggatgataccaacatcacaaatgaaggaaatgatgatccaaacataggagaaattgatgatcttcaactgttaaattcaggaaatgaggctgaagAGaatgtgcaagattgtggtgaacaagttacaattacaagtacaaatgaagcaagcacttcaaacgcaaatagcagtgcagaagctataagtgaagaagacattgacaacttcttggaaaatgaagaggggaacaaagtacaaattgacaagaaacacatacctgatattggaatggaatttaggtcagACAAAgaggctcatggattcttcaacttttatgcgtatcttgttggattctcaattgtcatcacacaccactacaagacaacaagcaagaagaggaatggtgagataacaagatatacataccagtgctacaggtatgggaaaaatgatgatggagaaaagaataaacagaagacaggtgaagaacaaagaaataccaatgtcattgacagaacaaattgcaagtgtttgatggtggtgaaagaggacttgaaagagtgcaacatacctacaagaagcatgattgtgatactgtcatttctgcgaggaggattgtcggcgctgccatataacaagaaagatgttagtaatgtgtcaacaacaattaattcagagacaaaaaatattgatatgaagcaagtcatggactatctaaaacaaaaagaagctgaagacccagggttctactacaagttgctgctagatgagaacaataaggtcaagagcatggttgagtttgaaacattgtggcctcaaatgattgagaagcatagtttgcaaaacatcaaatacctagagataatgtggagaacaagggaaaactatataccagtctacttcaagtatgatttctgcccatttattcatagtacagcactaagtgaagggacaaatgcaaggttcaaaaggggggtaggcccgacacactgtgtgatgacatttttgaaagaatatgacacaatcaatgacacaatcttcgacactgaatactgcaaagatcatgtgtccagaacgaaaaagccaaagaaattttggtcaagctatagcattgaattgcaagcatctgagctgtacaacttgggaattttcaaaaagtttcaagatgaattaagggagacattaaatcttgaagtggcagctatacaacatggaaagacatatgaggtatatgcagctgagaatctgacaaaaaaagaattcagacaaaggagatatgtggtcttgacagacatatctcaagaaaactttgtttgcatatgtgcgaaattctccaaagatgggatcctatgtagccatgttctcaaagtgatgttggcactaaaaatcagcaagatacctgataagtatataatagaaagatggaggaaaaaggagagaaaatgcacagctagaattgagaatacagctactaatgaaaacagttcggtcctgaggtttaatgtgctatcaagaagaatggcagacatggcttcaaaagcctcaaagagaaaagatacatacctttacatgctagatcaaatggacaagcttgatggaaatctggacttgttgcttgaagagggagatcaaaatctgccgcatgatggaaacagtacaatagaagaagcaattggacagcaagcgaatcaagaaacacttaatgaagaagaagaagaagaagaaGAAattgaggaccctgatttagcaaacacaaaaggaaaaaaatctgccaggacaaaaggaatagtggagaagctaaaagagggactattgaaacaaagaagaaaccagaacgggaacaggcaacaagttcctcaggcaaaagtaatgtacacatatttagctataaaaactgaataa
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| Protein seq | MDEEEEKKKKNKQMDQEDGTKKMKLTKETKLPGTISAAETTKDIKLQTKKKEPIQMKGSHYLQDFEKCKKSGTIGSEIGENKAQLLYDQYTFLNENERLVQGGQMSYTNLMQQIIQSPRVSLQANENSMILTTSRFSPQESHQHDRLYEEQISTEHWSYEEFDRLYNNSNMVTWTEGGPEKSIEELYESKNIHFKRKRDDTNITNEGNDDPNIGEIDDLQLLNSGNEAEENVQDCGEQVTITSTNEASTSNANSSAEAISEEDIDNFLENEEGNKVQIDKKHIPDIGMEFRSDKEAHGFFNFYAYLVGFSIVITHHYKTTSKKRNGEITRYTYQCYRYGKNDDGEKNKQKTGEEQRNTNVIDRTNCKCLMVVKEDLKECNIPTRSMIVILSFLRGGLSALPYNKKDVSNVSTTINSETKNIDMKQVMDYLKQKEAEDPGFYYKLLLDENNKVKSMVEFETLWPQMIEKHSLQNIKYLEIMWRTRENYIPVYFKYDFCPFIHSTALSEGTNARFKRGVGPTHCVMTFLKEYDTINDTIFDTEYCKDHVSRTKKPKKFWSSYSIELQASELYNLGIFKKFQDELRETLNLEVAAIQHGKTYEVYAAENLTKKEFRQRRYVVLTDISQENFVCICAKFSKDGILCSHVLKVMLALKISKIPDKYIIERWRKKERKCTARIENTATNENSSVLRFNVLSRRMADMASKASKRKDTYLYMLDQMDKLDGNLDLLLEEGDQNLPHDGNSTIEEAIGQQANQETLNEEEEEEEEIEDPDLANTKGKKSARTKGIVEKLKEGLLKQRRNQNGNRQQVPQAKVMYTYLAIKTE |
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| Function | Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0009080 | OsLima_10g0009080.01 | Chr10 | 14809112 | 14820478 | - | NAM | ||
| CDS seq | atggacgaagaggaggagaagaaaaagaagaacaagcagatggatcaagaagatggaaccaagaagatgaaactaacaaaagaaaccaaactcccaggaacaatttcagctgcagaaacaaccaaggacatcaagttgcagaccaagaaaaaagaaccaatacagatgaaaggatctcattacctgcaggattttgaaaaatgcaaaaagtcagggacaattggatcagagattggcgaaaataaagcacaactactttatgatcaatacacatttcttaatgaaaatgaaagactagttcagggaggacaaatgagctacactaacctcatgcaacagataattcaaagtccacgtgtcagcttgcaagcaaatgaaaattccatgattttgacaacaagcaggttttctcctcaagagtcacatcaacatgatagattgtatgaagaacagatatcgacagaacactggagctatgaagaatttgataggttatacaacaacagcaacatggtgacatggactgagggtggaccagaaaaaagtattgaggagttgtatgaatcaaaaaAtatacacttcaaaagaaagagggatgataccaacatcacaaatgaaggaaatgatgatccaaacataggagaaattgatgatcttcaactgttaaattcaggaaatgaggctgaagAGaatgtgcaagattgtggtgaacaagttacaattacaagtacaaatgaagcaagcacttcaaacgcaaatagcagtgcagaagctataagtgaagaagacattgacaacttcttggaaaatgaagaggggaacaaagtacaaattgacaagaaacacatacctgatattggaatggaatttaggtcagACAAAgaggctcatggattcttcaacttttatgcgtatcttgttggattctcaattgtcatcacacaccactacaagacaacaagcaagaagaggaatggtgagataacaagatatacataccagtgctacaggtatgggaaaaatgatgatggagaaaagaataaacagaagacaggtgaagaacaaagaaataccaatgtcattgacagaacaaattgcaagtgtttgatggtggtgaaagaggacttgaaagagtgcaacatacctacaagaagcatgattgtgatactgtcatttctgcgaggaggattgtcggcgctgccatataacaagaaagatgttagtaatgtgtcaacaacaattaattcagagacaaaaaatattgatatgaagcaagtcatggactatctaaaacaaaaagaagctgaagacccagggttctactacaagttgctgctagatgagaacaataaggtcaagagcatggttgagtttgaaacattgtggcctcaaatgattgagaagcatagtttgcaaaacatcaaatacctagagataatgtggagaacaagggaaaactatataccagtctacttcaagtatgatttctgcccatttattcatagtacagcactaagtgaagggacaaatgcaaggttcaaaaggggggtaggcccgacacactgtgtgatgacatttttgaaagaatatgacacaatcaatgacacaatcttcgacactgaatactgcaaagatcatgtgtccagaacgaaaaagccaaagaaattttggtcaagctatagcattgaattgcaagcatctgagctgtacaacttgggaattttcaaaaagtttcaagatgaattaagggagacattaaatcttgaagtggcagctatacaacatggaaagacatatgaggtatatgcagctgagaatctgacaaaaaaagaattcagacaaaggagatatgtggtcttgacagacatatctcaagaaaactttgtttgcatatgtgcgaaattctccaaagatgggatcctatgtagccatgttctcaaagtgatgttggcactaaaaatcagcaagatacctgataagtatataatagaaagatggaggaaaaaggagagaaaatgcacagctagaattgagaatacagctactaatgaaaacagttcggtcctgaggtttaatgtgctatcaagaagaatggcagacatggcttcaaaagcctcaaagagaaaagatacatacctttacatgctagatcaaatggacaagcttgatggaaatctggacttgttgcttgaagagggagatcaaaatctgccgcatgatggaaacagtacaatagaagaagcaattggacagcaagcgaatcaagaaacacttaatgaagaagaagaagaagaagaaGAAattgaggaccctgatttagcaaacacaaaaggaaaaaaatctgccaggacaaaaggaatagtggagaagctaaaagagggactattgaaacaaagaagaaaccagaacgggaacaggcaacaagttcctcaggcaaaagtaatgtacacatatttagctataaaaactgaataa
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| Protein seq | MDEEEEKKKKNKQMDQEDGTKKMKLTKETKLPGTISAAETTKDIKLQTKKKEPIQMKGSHYLQDFEKCKKSGTIGSEIGENKAQLLYDQYTFLNENERLVQGGQMSYTNLMQQIIQSPRVSLQANENSMILTTSRFSPQESHQHDRLYEEQISTEHWSYEEFDRLYNNSNMVTWTEGGPEKSIEELYESKNIHFKRKRDDTNITNEGNDDPNIGEIDDLQLLNSGNEAEENVQDCGEQVTITSTNEASTSNANSSAEAISEEDIDNFLENEEGNKVQIDKKHIPDIGMEFRSDKEAHGFFNFYAYLVGFSIVITHHYKTTSKKRNGEITRYTYQCYRYGKNDDGEKNKQKTGEEQRNTNVIDRTNCKCLMVVKEDLKECNIPTRSMIVILSFLRGGLSALPYNKKDVSNVSTTINSETKNIDMKQVMDYLKQKEAEDPGFYYKLLLDENNKVKSMVEFETLWPQMIEKHSLQNIKYLEIMWRTRENYIPVYFKYDFCPFIHSTALSEGTNARFKRGVGPTHCVMTFLKEYDTINDTIFDTEYCKDHVSRTKKPKKFWSSYSIELQASELYNLGIFKKFQDELRETLNLEVAAIQHGKTYEVYAAENLTKKEFRQRRYVVLTDISQENFVCICAKFSKDGILCSHVLKVMLALKISKIPDKYIIERWRKKERKCTARIENTATNENSSVLRFNVLSRRMADMASKASKRKDTYLYMLDQMDKLDGNLDLLLEEGDQNLPHDGNSTIEEAIGQQANQETLNEEEEEEEEIEDPDLANTKGKKSARTKGIVEKLKEGLLKQRRNQNGNRQQVPQAKVMYTYLAIKTE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0009080 | OsLima_10g0009080.02 | Chr10 | 14816905 | 14820491 | - | IsoSeq | ||
| CDS seq | aagagaaaaaaagaacacgcaagagaaagacca |
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| Protein seq | KRKKEHARERP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.123222 | 0.926089 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0381800 | SBH | 0.183438 | 0.000000 | 1.116402 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0381800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0009240 | RBH | 0.209964 | 9.611394 | 2.826511 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0009150 | RBH | 0.000000 | 2.711771 | 3.710001 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0009540 | RBH | 0.000000 | 0.114125 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0009300 | RBH | 0.000000 | 0.0 | 1.378307 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0223600 | RBH | 0.3135575 | 1.3640835 | 2.230872 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0009290 | RBH | 0.015134 | 0.208126 | 0.141777 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0241300 | RBH | 0.5125855 | 5.4307455 | 0.407379 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0014390 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0009460 | RBH | 3.388001 | 50.553932 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0009070 | RBH | 0.384196 | 0.0 | 0.297361 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0009570 | RBH | 0.108970 | 0.594118 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G009390 | RBH | 0.000000 | 0.000000 | 0.284200 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0009360 | RBH | 0.0 | 1.435245 | 1.127660 |
